Cell type-specific expression of LINE-1 open reading frames 1 and 2 in fetal and adult human tissues

Journal of Biological Chemistry

Volumn 279, Issue 26, 2004, Pages 27753-27763

  Ergün, Süleyman ^a   Buschmann, Christian ^a,b   Heukeshoven, Jochen ^c   Dammann, Kristin ^a   Schnieders, Frank ^a   Lauke, Heidrun ^a   Chalajour, Fariba ^a   Kilic, Nerbil ^a   Strätling, Wolf H ^a   Schumann, Gerald G ^a,b  

^a UNIVERSITY MEDICAL CENTER HAMBURG EPPENDORF   (Germany)

^b PAUL EHRLICH INSTITUT   (Germany)

^c UNIVERSITY OF HAMBURG   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCHEMISTRY; BLOOD VESSELS; MUTAGENESIS; POLYPEPTIDES; PROTEINS; TISSUE;

ANGIOGENESIS; CELL TYPE-SPECIFIC EXPRESSION; MAMMALIAN GENOMES;

CELLS;

GENE PRODUCT; OPEN READING FRAME 1 PROTEIN; OPEN READING FRAME 2 PROTEIN; UNCLASSIFIED DRUG;

ADULT; ANGIOGENESIS; ARTICLE; CELL DIFFERENTIATION; CELL SPECIFICITY; CELL TYPE; DNA FINGERPRINTING; ENDOTHELIUM CELL; FETUS; FETUS (ANATOMY); GENE MUTATION; GENOME; GERM CELL; HUMAN; HUMAN CELL; HUMAN TISSUE; IMMUNOHISTOCHEMISTRY; LEYDIG CELL; LONG INTERSPERSED REPEAT; LONG TERMINAL REPEAT; MAMMAL; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PEPTIDE ANALYSIS; PRIORITY JOURNAL; PROTEIN EXPRESSION; RETROPOSON; SERTOLI CELL; SOMATIC CELL; SPERMATOGONIUM; TESTIS; VASCULAR ENDOTHELIUM;

ADULT; AGED; AMINO ACID SEQUENCE; EPIDIDYMIS; FETUS; GENE EXPRESSION; HUMANS; IMMUNOHISTOCHEMISTRY; LEYDIG CELLS; LONG INTERSPERSED NUCLEOTIDE ELEMENTS; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; MUSCLE, SMOOTH, VASCULAR; OPEN READING FRAMES; PEPTIDE MAPPING; PLACENTA; PROTEIN BIOSYNTHESIS; PROTEINS; SERTOLI CELLS; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; SPERMATOZOA; TESTIS;

MAMMALIA;

EID: 3042589222     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M312985200     Document Type: Article

References (51)

1. Lander, E. S., Linton, L. M., Birren, B., Nusbaum, C., Zody, M. C., Baldwin, J., Devon, K., Dewar, K., Doyle, M., FitzHugh, W., Funke, R., Gage, D., Harris, K., Heaford, A., Howland, J., Kann, L., Lehoczky, J., LeVine, R., McEwan, P., McKernan, K., Meldrim, J., Mesirov, J. P., Miranda, C., Morris, W., Naylor, J., Raymond, C., Rosetti, M., Santos, R., Sheridan, A., Sougnez, C., Stange-Thomann, N., Stojanovic, N., Subramanian, A., Wyman, D., Rogers, J., Sulston, J., Ainscough, R., Beck, S., Bentley, D., Burton, J., Clee, C., Carter, N., Coulson, A., Deadman, R., Deloukas, P., Dunham, A., Dunham, I., Durbin, R., French, L., Grafham, D., Gregory, S., Hubbard, T., Humphray, S., Hunt, A., Jones, M., Lloyd, C., McMurray, A., Matthews, L., Mercer, S., Milne, S., Mullikin, J. C., Mungall, A., Plumb, R., Ross, M., Shownkeen, R., Sims, S., Waterston, R. H., Wilson, R. K., Hillier, L. W., McPherson, J. D., Marra, M. A., Mardis, E. R., Fulton, L. A., Chinwalla, A. T., Pepin, K. H., Gish, W. R., Chissoe, S. L., Wendl, M. C., Delehaunty, K. D., Miner, T. L., Delehaunty, A., Kramer, J. B., Cook, L. L., Fulton, R. S., Johnson, D. L., Minx, P. J., Clifton, S. W., Hawkins, T., Branscomb, E., Predki, P., Richardson, P., Wenning, S., Slezak, T., Doggett, N., Cheng, J. F., Olsen, A., Lucas, S., Elkin, C., Uberbacher, E., Frazier, M., Gibbs, R. A., Muzny, D. M., Scherer, S. E., Bouck, J. B., Sodergren, E. J., Worley, K. C., Rives, C. M., Gorrell, J. H., Metzker, M. L., Naylor, S. L., Kucherlapati, R. S., Nelson, D. L., Weinstock, M., Sakaki, Y., Fujiyama, A., Hattori, M., Yada, T., Toyoda, A., Itoh, T., Kawagoe, C., Watanabe, H., Totoki, Y., Taylor, T., Weissenbach, J., Helig, R., Saurin, W., Artiguenave, F., Brottier, P., Bruls, T., Pelletier, E., Robert, C., Wincker, P., Smith, D. R., Doucette-Stamm, L., Rubenfield, M., Weinstock, K., Lee, H. M., Dubois, J., Rosenthal, A., Platzer, M., Nyakatura, G., Taudien, S., Rump, A., Yang, H., Yu, J., Wang, J., Huang, G., Gu, J., Hood, L., Rowen, L., Madan, A., Qin, S., Davis, R. W., Federspiel, N. A., Abola, A. P., Proctor, M. J., Myers, R. M., Schmutz, J., Dickson, M., Grimwood, J., Cox, D. R., Olson, M. V., Kaul, R., Raymond, C., Shimizu, N., Kawasaki, K., Minoshima, S., Evans, G. A., Athanasiou, M., Schultz, R., Roe, B. A., Chen, F., Pan, H., Ramser, J., Lehrach, H., Reinhardt, R., McCombie, W. R., de la Bastide, M., Dedhia, N., Blocker, H., Hornischer, K., Nordsiek, G., Agarwala, R., Aravind, L., Bailey, J. A., Bateman, A., Batzoglou, S., Birney, E., Bork, P., Brown, D. G., Burge, C. B., Cerutti, L., Chen, H. C., Church, D., Clamp, M., Copley, R. R., Doerks, T., Eddy, S. R., Eichler, E. E., Furey, T. S., Galagan, J., Gilbert, J. G., Harmon, C., Hayashizaki, Y., Haussler, D., Hermjakob, H., Hokamp, K., Jang, W., Johnson, L. S., Jones, T. A., Kasif, S., Kaspryzk, A., Kennedy, S., Kent, W. J., Kitts, P., Koonin, E. V., Korf, I., Kulp, D., Lancet, D., Lowe, T. M., McLysaght, A., Mikkelsen, T., Moran, J. V., Mulder, N., Pollara, V. J., Ponting, C. P., Schuler, G., Schultz, J., Slater, G., Smit, A. F., Stupka, E., Szustakowski, J., Thierry-Mieg, D., Thierry-Mieg, J., Wagner, L., Wallis, J., Wheeler, R., Williams, A., Wolf, Y. I., Wolfe, K. H., Yang, S. P., Yeh, R. F., Collins, F., Guyer, M. S., Peterson, J., Felsenfeld, A., Wetterstrand, K. A., Patrinos, A., Morgan, M. J., Szustakowki, J., de Jong, P., Catanese, J. J., Osoegawa, K., Shizuya, H., Choi, S., Chen, Y. J., and the International Human Genome Sequencing Consortium (2001) Nature 409, 860-921
2. Sassaman, D. M., Dombroski, B. A., Moran, J. V., Kimberland, M. L., Naas, T. P., DeBerardinis, R. J., Gabriel, A., Swergold, G. D., and Kazazian, H. H., Jr. (1997) Nat. Genet. 16, 37-43
3. Brouha, B., Schustak, J., Badge, R. M., Lutz-Prigge, S., Farley, A. H., Moran, J. V., and Kazazian, H. H., Jr. (2003) Proc. Natl. Acad. Sci. U. S. A. 100, 5280-5285
4. Moran, J. V., Holmes, S. E., Naas, T. P., DeBerardinis, R. J., Boeke, J. D., and Kazazian, H. H., Jr. (1996) Cell 87, 917-927
5. Kimberland, M. L., Divoky, V., Prchal, J., Schwahn, U., Berger, W., and Kazazian, H. H., Jr. (1999) Hum. Mol. Genet. 8, 1557-1560
6. Brouha, B., Meischl, C., Ostertag, E., de Boer, M., Zhang, Y., Neijens, H., Roos, D., and Kazazian, H. H., Jr. (2002) Am. J. Hum. Genet. 71, 327-336
7. Kazazian, H. H. (2000) Science 289, 1152-1153
8. Gilbert, N., Lutz-Prigge, S., and Moran, J. V. (2002) Cell 110, 315-325
9. Symer, D. E., Connelly, C., Szak, S. T., Caputo, E. M., Cost, G. J., Parmigani, G., and Boeke, J. D. (2002) Cell 110, 327-338
10. Ostertag, E. M., and Kazazian, H. H., Jr. (2001) Annu. Rev. Genet. 35, 501-538
11. Feng, Q., Moran, J., Kazazian, H. H., Jr., and Boeke, J. D. (1996) Cell 87, 905-916
12. Jurka, J. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 1872-1877
13. Cost, G. J., and Boeke, J. D. (1998) Biochemistry 37, 18081-18093
14. Luan, D. D., Korman, M. H., Jakubczak, J. L., and Eickbush, T. H. (1993) Cell 72, 595-605
15. Cost, G. J., Feng, Q., Jacquier, A., and Boeke, J. D. (2002) EMBO J. 21, 5899-5910
16. Martin, S. L., and Bushman, F. D. (2001) Mol. Cell. Biol. 21, 467-475
17. Asch, H. L., Eliacin, E., Fanning, T. G., Connolly, J. L., Bratthauer, G., and Asch, B. B. (1996) Oncol. Res. 8, 239-247
18. Bratthauer, G. L., Cardiff, R. D., and Fanning, T. G. (1994) Cancer 73, 2333-2336
19. Bratthauer, G. L., and Fanning, T. G. (1992) Oncogene 7, 507-510
20. Bratthauer, G. L., and Fanning, T. G. (1993) Cancer 71, 2383-2386
21. Branciforte, D., and Martin, S. L. (1994) Mol. Cell. Biol. 14, 2584-2592
22. Martin, S. L., and Branciforte, D. (1993) Mol. Cell. Biol. 13, 5383-5392
23. Trelogan, S. A., and Martin, S. L. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 1520-1524
24. Wartenberg, H. (1990) in Humanembryologie (Hinrichsen, K. V., ed) pp. 745-820, Springer-Verlag, Berlin
25. Leibold, D. M., Swergold, G. D., Singer, M. F., Thayer, R. E., Dombroski, B. A., and Fanning, T. G. (1990) Proc. Natl. Acad. Sci. U. S. A. 87, 6990-6994
26. Rose, M. D., Winston, F., and Hieter, P. (1990) Methods in Yeast Genetics: A Laboratory Course Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
27. Dombroski, B. A., Mathias, S. L., Nanthakumar, E., Scott, A. F., and Kazazian, H. H., Jr. (1991) Science 254, 1805-1808
28. Akita, E. M., and Nakai, S. (1993) J. Immunol. Methods 160, 207-214
29. Kilic, N., and Ergün, S. (2001) Methods Mol. Med. 58, 125-148
30. Silva, R., and Burch, J. B. (1989) Mol. Cell. Biol. 9, 3563-3566
31. Malik, H. S., Burke, W. D., and Eickbush, T. H. (1999) Mol. Biol. Evol. 16, 793-805
32. Skowronski, J., and Singer, M. F. (1985) Proc. Natl. Acad. Sci. U. S. A. 82, 6050-6054
33. Holstein, A. F., and Davidoff, M. S. (1997) in Recent Advances in Microscopy of Cells, Tissues, and Organs (Motta, P. M., ed) pp. 569-577, Antonio Delfino Editore, Rome
34. Hohjoh, H., Minakami, R., and Sakaki, Y. (1990) Nucleic Acids Res. 18, 4099-4104
35. Hubbard, T., Barker, D., Birney, E., Cameron, G., Chen, Y., Clark, L., Cox, T., Cuff, J., Curwen, V., Down, T., Durbin, R., Eyras, E., Gilbert, J., Hammond, M., Huminiecki, L., Kasprzyk, A., Lehvaslaiho, H., Lijnzaad, P., Melsopp, C., Mongin, E., Pettett, R., Pocock, M., Potter, S., Rust, A., Schmidt, E., Searle, S., Slater, G., Smith, J., Spooner, W., Stabenau, A., Stalker, J., Stupka, E., Ureta-Vidal, A., Vastrik, I., and Clamp, M. (2002) Nucleic Acids Res. 30, 38-41
36. Ergün, S., Kilic, N., Harneit, S., Paust, H. J., Ungefroren, H., Mukhopadhyay, A., Davidoff, M., and Holstein, A. F. (1997) Adv. Exp. Med. Biol. 424, 163-180
37. Tchénio, T., Casella, J.-F., and Heidmann, T. (2000) Nucleic Acids Res. 28, 411-415
38. Becker, K. G., Swergold, G. D., Ozato, K., and Thayer, R. E. (1993) Hum. Mol. Genet. 2, 1697-1702
39. Yu, F., Zingler, N., Schumann, G., and Strätling, W. H. (2001) Nucleic Acids Res. 29, 4493-4501
40. Müller, C., Readhead, C., Diederichs, S., Idos, G., Yang, R., Tidow, N., Serve, H., Berdel, W. E., and Koeffler, H. P. (2000) Mol. Cell. Biol. 20, 3316-3329
41. Harris, J. R. (1998) BioEssays 20, 307-316
42. Frendo, J.-L., Olivier, D., Cheynet, V., Blond, J.-L., Bouton, O., Vidaud, M., Rabreau, M., Evain-Brion, D., and Mallet, F. (2003) Mol. Cell. Biol. 23, 3566-3574
43. Folkman, J. (2003) Semin. Cancer Biol. 13, 159-167
44. Esnault, C., Maestre, J., and Heidmann, T. (2000) Nat. Genet. 24, 363-367
45. Dewannieux, M., Esnault, C., and Heidmann, T. (2003) Nat. Genet. 35, 41-48
46. Boissinot, S., Entezam, A., and Furano, A. V. (2001) Mol. Biol. Evol. 18, 926-935
47. Smit, A. F. A., Toth, G., Riggs, A. D., and Jurka, J. (1995) J. Mol. Biol. 246, 401-417
48. Frankel, A. D., Bredt, D. S., and Pabo, C. O. (1990) Science 240, 70-73
49. Matthews, J. M., and Sunde, M. (2002) IUBMB Life 54, 351-355
50. McMillan, J. P., and Singer, M. F. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 11533-11537
51. Ilves, H., Kahre, O., and Speek, M. (1992) Mol. Cell. Biol. 12, 4242-4248