-
2
-
-
0034681134
-
Plasmid copy-number control and better-than-random segregation genes of pSM19035 share a common regulator
-
de la Hoz,A.B., Ayora,S., Sitkiewicz,I., Fernandez,S., Pankiewicz,R., Alonso,J.C. and Ceglowski,P. (2000) Plasmid copy-number control and better-than-random segregation genes of pSM19035 share a common regulator. Proc. Natl Acad. Sci. USA, 97, 728-733.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 728-733
-
-
de la Hoz, A.B.1
Ayora, S.2
Sitkiewicz, I.3
Fernandez, S.4
Pankiewicz, R.5
Alonso, J.C.6
Ceglowski, P.7
-
3
-
-
0036583638
-
Tandem DNA recognition by PhoB, a two-component signal transduction transcriptional activator
-
Blanco,A.G., Sola,M., Gomis-Ruth,F.X. and Coll,M. (2002) Tandem DNA recognition by PhoB, a two-component signal transduction transcriptional activator. Structure (Camb), 10, 701-713.
-
(2002)
Structure (Camb)
, vol.10
, pp. 701-713
-
-
Blanco, A.G.1
Sola, M.2
Gomis-Ruth, F.X.3
Coll, M.4
-
4
-
-
0041559751
-
Regulation of sialic acid catabolism by the DNA binding protein NanR in Escherichia coli
-
Kalivoda,K.A., Steenbergen,S.M., Vimr,E.R. and Plumbridge,J. (2003) Regulation of sialic acid catabolism by the DNA binding protein NanR in Escherichia coli. J. Bacteriol., 185, 4806-4815.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 4806-4815
-
-
Kalivoda, K.A.1
Steenbergen, S.M.2
Vimr, E.R.3
Plumbridge, J.4
-
5
-
-
0346980557
-
Bacterial mitosis: ParM of plasmid R1 moves plasmid DNA by an actin-like insertional polymerization mechanism
-
Moller-Jensen,J., Borch,J., Dam,M., Jensen,R.B., Roepstorff,P. and Gerdes,K. (2003) Bacterial mitosis: ParM of plasmid R1 moves plasmid DNA by an actin-like insertional polymerization mechanism. Mol. Cell, 12, 1477-1487.
-
(2003)
Mol. Cell
, vol.12
, pp. 1477-1487
-
-
Moller-Jensen, J.1
Borch, J.2
Dam, M.3
Jensen, R.B.4
Roepstorff, P.5
Gerdes, K.6
-
6
-
-
0026641755
-
Crystal structure of the met repressor-operator complex at 2.8 Å resolution reveals DNA recognition by β-strands
-
Somers,W.S. and Phillips,S.E. (1992) Crystal structure of the met repressor-operator complex at 2.8 Å resolution reveals DNA recognition by β-strands. Nature, 359, 387-393.
-
(1992)
Nature
, vol.359
, pp. 387-393
-
-
Somers, W.S.1
Phillips, S.E.2
-
7
-
-
0028177303
-
DNA recognition by β-sheets in the Arc repressor-operator crystal structure
-
Raumann,B.E., Rould,M.A., Pabo,C.O. and Sauer,R.T. (1994) DNA recognition by β-sheets in the Arc repressor-operator crystal structure. Nature, 367, 754-757.
-
(1994)
Nature
, vol.367
, pp. 754-757
-
-
Raumann, B.E.1
Rould, M.A.2
Pabo, C.O.3
Sauer, R.T.4
-
8
-
-
0033514299
-
96 Origins of DNA-binding specificity: Role of protein contacts with the DNA backbone
-
Schildbach,J.F., Karzai,A.W., Raumann,B.E. and Sauer,R.T. (1999) Origins of DNA-binding specificity: role of protein contacts with the DNA backbone. Proc. Natl Acad. Sci. USA, 96, 811-817.
-
(1999)
Proc. Natl. Acad. Sci. USA
, pp. 811-817
-
-
Schildbach, J.F.1
Karzai, A.W.2
Raumann, B.E.3
Sauer, R.T.4
-
9
-
-
0039985836
-
The structure of plasmid-encoded transcriptional repressor CopG unliganded and bound to its operator
-
Gomis-Ruth,F.X., Sola,M., Acebo,P., Parraga,A., Guasch,A., Eritja,R., Gonzalez,A., Espinosa,M., del Solar,G. and Coll,M. (1998) The structure of plasmid-encoded transcriptional repressor CopG unliganded and bound to its operator. EMBO J., 17, 7404-7415.
-
(1998)
EMBO J.
, vol.17
, pp. 7404-7415
-
-
Gomis-Ruth, F.X.1
Sola, M.2
Acebo, P.3
Parraga, A.4
Guasch, A.5
Eritja, R.6
Gonzalez, A.7
Espinosa, M.8
del Solar, G.9
Coll, M.10
-
10
-
-
0035824885
-
Crystal structure of omega transcriptional repressor encoded by Streptococcus pyogenes plasmid pSM19035 at 1.5 Å resolution
-
Murayama,K., Orth,P., de la Hoz,A.B., Alonso,J.C. and Saenger,W. (2001) Crystal structure of omega transcriptional repressor encoded by Streptococcus pyogenes plasmid pSM19035 at 1.5 Å resolution. J. Mol. Biol., 314, 789-796.
-
(2001)
J. Mol. Biol.
, vol.314
, pp. 789-796
-
-
Murayama, K.1
Orth, P.2
de la Hoz, A.B.3
Alonso, J.C.4
Saenger, W.5
-
11
-
-
0344826584
-
ParG, a protein required for active partition of bacterial plasmids, has a dimeric ribbon-helix-helix structure
-
Golovanov,A.P., Barilla,D., Golovanova,M., Hayes,F. and Lian,L.Y. (2003) ParG, a protein required for active partition of bacterial plasmids, has a dimeric ribbon-helix-helix structure. Mol. Microbiol., 50, 1141-1153
-
(2003)
Mol. Microbiol.
, vol.50
, pp. 1141-1153
-
-
Golovanov, A.P.1
Barilla, D.2
Golovanova, M.3
Hayes, F.4
Lian, L.Y.5
-
12
-
-
0141841775
-
Crystal structure of the nickel-responsive transcription factor NikR
-
Schreiter,E.R., Sintchak,M.D., Guo,Y., Chivers,P.T., Sauer,R.T. and Drennan,C.L. (2003) Crystal structure of the nickel-responsive transcription factor NikR. Nature Struct. Biol., 10, 794-799.
-
(2003)
Nature Struct. Biol.
, vol.10
, pp. 794-799
-
-
Schreiter, E.R.1
Sintchak, M.D.2
Guo, Y.3
Chivers, P.T.4
Sauer, R.T.5
Drennan, C.L.6
-
13
-
-
12244282678
-
2 protein complex of the broad host-range Streptococcus pyogenes pSM19035 addiction system
-
2 protein complex of the broad host-range Streptococcus pyogenes pSM19035 addiction system. Biol. Chem., 383, 1701-1713.
-
(2002)
Biol. Chem.
, vol.383
, pp. 1701-1713
-
-
Camacho, A.G.1
Misselwitz, R.2
Behlke, J.3
Ayora, S.4
Welfle, K.5
Meinhart, A.6
Lara, B.7
Saenger, W.8
Welfle, H.9
Alonso, J.C.10
-
15
-
-
0023041394
-
An underlying repeat in some transcriptional control sequences corresponding to half a double helical turn of DNA
-
Rhodes,D. and Klug,A. (1986) An underlying repeat in some transcriptional control sequences corresponding to half a double helical turn of DNA. Cell, 46, 123-132.
-
(1986)
Cell
, vol.46
, pp. 123-132
-
-
Rhodes, D.1
Klug, A.2
-
16
-
-
0029739627
-
Cooperative DNA binding and sequence-selective recognition conferred by the STAT amino-terminal domain
-
Xu,X., Sun,Y.L. and Hoey,T. (1996) Cooperative DNA binding and sequence-selective recognition conferred by the STAT amino-terminal domain. Science, 273, 794-797.
-
(1996)
Science
, vol.273
, pp. 794-797
-
-
Xu, X.1
Sun, Y.L.2
Hoey, T.3
-
17
-
-
0025965278
-
Cooperative binding of Drosophila heat shock factor to arrays of a conserved 5 bp unit
-
Xiao,H., Perisic,O. and Lis,J.T. (1991) Cooperative binding of Drosophila heat shock factor to arrays of a conserved 5 bp unit. Cell, 64, 585-593.
-
(1991)
Cell
, vol.64
, pp. 585-593
-
-
Xiao, H.1
Perisic, O.2
Lis, J.T.3
-
18
-
-
0027481037
-
Characterization of the DNA binding domain of the mouse IRF-2 protein
-
Uegaki,K., Shirakawa,M., Fujita,T., Taniguchi,T. and Kyogoku,Y. (1993) Characterization of the DNA binding domain of the mouse IRF-2 protein. Protein Eng., 6, 195-200.
-
(1993)
Protein Eng.
, vol.6
, pp. 195-200
-
-
Uegaki, K.1
Shirakawa, M.2
Fujita, T.3
Taniguchi, T.4
Kyogoku, Y.5
-
19
-
-
0035958021
-
Heterodimerization of mineralocorticoid and glucocorticoid receptors at a novel negative response element of the 5-HT1A receptor gene
-
Ou,X.M., Storring,J.M., Kushwaha,N. and Albert,P.R. (2001) Heterodimerization of mineralocorticoid and glucocorticoid receptors at a novel negative response element of the 5-HT1A receptor gene. J. Biol. Chem., 276, 14299-14307.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 14299-14307
-
-
Ou, X.M.1
Storring, J.M.2
Kushwaha, N.3
Albert, P.R.4
-
20
-
-
0025812291
-
Direct repeats as selective response elements for the thyroid hormone, retinoic acid and vitamin D3 receptors
-
Umesono,K., Murakami,K.K., Thompson,C.C. and Evans,R.M. (1991) Direct repeats as selective response elements for the thyroid hormone, retinoic acid and vitamin D3 receptors. Cell, 65, 1255-1266.
-
(1991)
Cell
, vol.65
, pp. 1255-1266
-
-
Umesono, K.1
Murakami, K.K.2
Thompson, C.C.3
Evans, R.M.4
-
21
-
-
0025860708
-
The orientation and spacing of core DNA-binding motifs dictate selective transcriptional responses to three nuclear receptors
-
Naar,A.M., Boutin,J.M., Lipkin,S.M., Yu,V.C., Holloway,J.M., Glass,C.K. and Rosenfeld,M.G. (1991) The orientation and spacing of core DNA-binding motifs dictate selective transcriptional responses to three nuclear receptors. Cell, 65, 1267-1279.
-
(1991)
Cell
, vol.65
, pp. 1267-1279
-
-
Naar, A.M.1
Boutin, J.M.2
Lipkin, S.M.3
Yu, V.C.4
Holloway, J.M.5
Glass, C.K.6
Rosenfeld, M.G.7
-
22
-
-
0029044997
-
Structural determinants of nuclear receptor assembly on DNA direct repeats
-
Rastinejad,F., Perlmann,T., Evans,R.M. and Sigler,P.B. (1995) Structural determinants of nuclear receptor assembly on DNA direct repeats. Nature, 375, 203-211.
-
(1995)
Nature
, vol.375
, pp. 203-211
-
-
Rastinejad, F.1
Perlmann, T.2
Evans, R.M.3
Sigler, P.B.4
-
23
-
-
0026279733
-
Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system
-
Studier,F.W. (1991) Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system. J. Mol. Biol., 219, 37-44.
-
(1991)
J. Mol. Biol.
, vol.219
, pp. 37-44
-
-
Studier, F.W.1
-
24
-
-
0004136246
-
-
2nd Edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook,J., Fritsch,E.F. and Maniatis,T. (1989) Molecular Cloning: A Laboratory Manual. 2nd Edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
25
-
-
12944273598
-
Crystallization preliminary X-ray diffraction studies of Streptococcus pyogenes plasmid pSM19035-encoded omega transcriptional repressor
-
Murayama,K., de la Hoz,A.B., Alings,C., Lopez,G., Orth,P., Alonso,J.C. and Saenger,W. (1999) Crystallization and preliminary X-ray diffraction studies of Streptococcus pyogenes plasmid pSM19035-encoded omega transcriptional repressor. Acta. Crystallogr. D Biol. Crystallogr., 55, 2041-2042.
-
(1999)
Acta Crystallogr. D Biol. Crystallogr.
, vol.55
, pp. 2041-2042
-
-
Murayama, K.1
de la Hoz, A.B.2
Alings, C.3
Lopez, G.4
Orth, P.5
Alonso, J.C.6
Saenger, W.7
-
26
-
-
0035929158
-
Stability and DNA-binding properties of the omega regulator protein from the broad-host range Streptococcus pyogenes plasmid pSM19035
-
Misselwitz,R., de la Hoz,A.B., Ayora,S., Welfle,K., Behlke,J., Murayama,K., Saenger,W., Alonso,J.C. and Welfle,H. (2001) Stability and DNA-binding properties of the omega regulator protein from the broad-host range Streptococcus pyogenes plasmid pSM19035. FEBS Lett., 505, 436-440.
-
(2001)
FEBS Lett.
, vol.505
, pp. 436-440
-
-
Misselwitz, R.1
de la Hoz, A.B.2
Ayora, S.3
Welfle, K.4
Behlke, J.5
Murayama, K.6
Saenger, W.7
Alonso, J.C.8
Welfle, H.9
-
27
-
-
0033229814
-
ATP- and ADP-dnaA protein, a molecular switch in gene regulation
-
Speck,C., Weigel,C. and Messer,W. (1999) ATP- and ADP-dnaA protein, a molecular switch in gene regulation. EMBO J., 18, 6169-6176.
-
(1999)
EMBO J.
, vol.18
, pp. 6169-6176
-
-
Speck, C.1
Weigel, C.2
Messer, W.3
-
28
-
-
0001268975
-
Hydroxyl radical footprinting: High-resolution information about DNA-protein contacts and application to lambda repressor and Cro protein
-
Tullius,T.D. and Dombroski,B.A. (1986) Hydroxyl radical footprinting: high-resolution information about DNA-protein contacts and application to lambda repressor and Cro protein. Proc. Natl Acad. Sci. USA, 83, 5469-5473.
-
(1986)
Proc. Natl. Acad. Sci. USA
, vol.83
, pp. 5469-5473
-
-
Tullius, T.D.1
Dombroski, B.A.2
-
29
-
-
0003889491
-
-
Wiley-Interscience, New York, Chichester, Weinheim, Brisbane, Singapore, Toronto, Canada
-
Hammes,G.G. (2000) Thermodynamics and Kinetics for the Biological Sciences. Wiley-Interscience, New York, Chichester, Weinheim, Brisbane, Singapore, Toronto, Canada.
-
(2000)
Thermodynamics and Kinetics for the Biological Sciences
-
-
Hammes, G.G.1
-
30
-
-
0029048582
-
P22 Arc repressor: Role of cooperativity in repression and binding to operators with altered half-site spacing
-
Smith,T.L. and Sauer,R.T. (1995) P22 Arc repressor: role of cooperativity in repression and binding to operators with altered half-site spacing. J. Mol. Biol., 249, 729-742.
-
(1995)
J. Mol. Biol.
, vol.249
, pp. 729-742
-
-
Smith, T.L.1
Sauer, R.T.2
-
31
-
-
0030606226
-
Role of operator subsites in Arc repression
-
Smith,T.L. and Sauer,R.T. (1996) Role of operator subsites in Arc repression. J. Mol. Biol., 264, 233-242.
-
(1996)
J. Mol. Biol.
, vol.264
, pp. 233-242
-
-
Smith, T.L.1
Sauer, R.T.2
-
32
-
-
0024419731
-
Cooperative tandem binding of met repressor of Escherichia coli
-
Phillips,S.E., Manfield,I., Parsons,I., Davidson,B.E., Rafferty,J.B., Somers,W.S., Margarita,D., Cohen,G.N., Saint-Girons,I. and Stockley,P.G. (1989) Cooperative tandem binding of met repressor of Escherichia coli. Nature, 341, 711-715.
-
(1989)
Nature
, vol.341
, pp. 711-715
-
-
Phillips, S.E.1
Manfield, I.2
Parsons, I.3
Davidson, B.E.4
Rafferty, J.B.5
Somers, W.S.6
Margarita, D.7
Cohen, G.N.8
Saint-Girons, I.9
Stockley, P.G.10
-
33
-
-
0027941733
-
The Met repressor-operator complex: DNA recognition by β-strands
-
Somers,W.S., Rafferty,J.B., Phillips,K., Strathdee,S., He,Y.Y., McNally,T., Manfield.I., Navratil,O., Old,I.G., Saint-Girons,I. et al. (1994) The Met repressor-operator complex: DNA recognition by β-strands. Ann. N. Y. Acad. Sci., 726, 105-117.
-
(1994)
Ann. N. Y. Acad. Sci.
, vol.726
, pp. 105-117
-
-
Somers, W.S.1
Rafferty, J.B.2
Phillips, K.3
Strathdee, S.4
He, Y.Y.5
McNally, T.6
Manfield, I.7
Navratil, O.8
Old, I.G.9
Saint-Girons, I.10
-
34
-
-
0038558329
-
Raman spectroscopy of regulatory protein Omega from Streptococcus pyogenes plasmid pSM19035 and complexes with operator DNA
-
Dostál,L., Misselwitz,R., Laettig,S., Alonso,J.C. and Welfle,H. (2003) Raman spectroscopy of regulatory protein Omega from Streptococcus pyogenes plasmid pSM19035 and complexes with operator DNA. Spectroscopy, 17, 435-445.
-
(2003)
Spectroscopy
, vol.17
, pp. 435-445
-
-
Dostál, L.1
Misselwitz, R.2
Laettig, S.3
Alonso, J.C.4
Welfle, H.5
|