Basic leucine zipper transcription factors C/EBP and MafL in the hydrozoan jellyfish Podocoryne carnea

Developmental Dynamics

Volumn 230, Issue 3, 2004, Pages 392-402

  Seipel, Katjo ^a,b   Yanze, Nathalie ^a   Müller, Peter ^a   Streitwolf, Ruth ^a   Schmid, Volker ^a  

^a UNIVERSITY OF BASEL   (Switzerland)

^b Institute of Zoology   (Switzerland)

Author keywords

Basic leucine zipper; Bzip; C EBP; CCAAT enhancer binding; Cnidaria; Evolution; Gametogenesis; MafL; Myogenesis

Indexed keywords

CCAAT ENHANCER BINDING PROTEIN; LEUCINE ZIPPER PROTEIN;

ANIMAL TISSUE; ARTICLE; GAMETOGENESIS; GENE; GENE STRUCTURE; JELLYFISH; LARVA; MAFL GENE; MOLECULAR EVOLUTION; MUSCLE CELL; MUSCLE DEVELOPMENT; NERVE CELL DIFFERENTIATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PRIORITY JOURNAL;

AMINO ACID SEQUENCE; ANIMALS; CELL DIFFERENTIATION; CLONING, MOLECULAR; EVOLUTION, MOLECULAR; GENE EXPRESSION; IN SITU HYBRIDIZATION; LEUCINE ZIPPERS; LIFE CYCLE STAGES; METAMORPHOSIS, BIOLOGICAL; MOLECULAR SEQUENCE DATA; MUSCLE, SKELETAL; NEURONS; PROTEIN STRUCTURE, TERTIARY; REGENERATION; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SCYPHOZOA; SEQUENCE HOMOLOGY, AMINO ACID; TRANSCRIPTION FACTORS;

BILATERIA; CNIDARIA; HYDROZOA; PODOCORYNE; PODOCORYNE CARNEA; SCYPHOZOA;

EID: 3042569596     PISSN: 10588388     EISSN: None     Source Type: Journal    
DOI: 10.1002/dvdy.20061     Document Type: Article

References (59)

1. Aerne BL, Baader CD, Schmid V. 1995. Life stage and tissue-specific expression of the homeobox gene cnox1-Pc of the hydrozoan Podocoryne carnea. Dev Biol 169:547-556.
2. Alberini CM, Ghirardi M, Metz R, Kandel ER. 1994. C/EBP is an immediate-early gene required for the consolidation of long-term facilitation in Aplysia. Cell 76: 1099-1114.
3. Alder H, Schmid V. 1987. Cell cycles and in vitro transdifferentiation and regeneration of isolated, striated muscle of jellyfish. Dev Biol 124:358-369.
4. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
5. Blank V, Andrews NC. 1997. The Maf transcription factors: regulators of differentiation. Trends Biochem Sci 22:437-441.
6. Boero F, Gravili C, Pagliari P, Piraino S, Bouillon F, Schmid V. 1998. The cnidarian premises of metazoan evolution: from triploblasty, to coelom formation, to metamery. Ital J Zool 65:5-9.
7. Bölsterli U. 1977. An electron microscopic study of early developmental stages, myogenesis, oogenesis and cnidogenesis in the anthomedusa Podocoryne carnea M. Sars. J Morphol 154:259-289.
8. Bouillon J. 1994. Classe des hydrozaires. In: Grasse PP, editor. Traité de Zoologie. Cnidaires. Cténaires. Vol. 3. Fascicule 2. Paris: Masson. p 29-419.
9. Brändle E. 1971. Bedeutung der kolonialen Komponenten für die Bildung und Differenzierung der Medusen von Podocoryne carnea M Sars. Wilhelm Rouxs Arch 166:254-286.
10. Cooper C, Henderson A, Artandi S, Avitahl N, Calame K. 1995. Ig/EBP (C/EBP gamma) is a transdominant negative inhibitor of C/EBP family transcriptional activators. Nucleic Acids Res 23:4371-4377.
11. Cordes SP, Barsh GS. 1994. The mouse segmentation gene kr encodes a novel basic domain-leucine zipper transcription factor. Cell 79:1025-1034.
12. Darlington GJ, Wang N, Hanson RW. 1995. C/EBPα: a critical regulator of genes governing integrative metabolic processes. Curr Opin Genet Dev 5:565-570.
13. Diehl AM. 1998. Roles of CCAAT/enhancer-binding proteins in regulation of liver regenerative growth. J Biol Chem 273: 30843-30846.
14. Frey J. 1968. Die Entwicklungsleistungen der Medusenknospen und Medusen von Podocoryne carnea M. Sars nach Isolation und Dissoziation. Wilhelm Rouxs Arch 160:428-464.
15. Gajewski M, Schmutzler C, Plickert G. 1998. Structure of neuropeptide precursors in Cnidaria. Ann N Y Acad Sci 839:311-315.
16. Galliot B, Schmid V. 2002. Cnidarians as a model system for understanding evolution and regeneration. Int J Dev Biol 46:39-48.
17. Gröger H, Schmid V. 2000. Nerve net differentiation in medusa development of Podocoryne carnea. Sci Mar 64:107-116.
18. Huang W, Lu N, Eberspaecher H, De Crombrugghe B. 2002. A new long form of c-Maf cooperates with Sox9 to activate the type II collagen gene. J Biol Chem 277:50668-50675.
19. Hyman LH. 1940. The invertebrates: protozoa through ctenophora. New York: McGraw-Hill.
20. Jeanmougin F, Thompson JD, Gouy M, Higgins DG, Gibson TJ. 1998. Multiple sequence alignment with Clustal X. Trends Biochem Sci 23:403-405.
21. Korneev S, Fedorov A, Collins R, Blackshaw SE, Davies JA. 1997. A subtractive CDNA library from an identified regenerating neuron is enriched in sequences up-regulated during nerve regeneration. Invert Neurosci 3:185-192.
22. Kountouras J, Boura P, Lygidakis NJ. 2001. Liver regeneration after hepatectomy. Hepatogastroenterology 48:556-562.
23. Kühn A. 1910. Die Entwicklung der Geschlechtsindividuen der Hydromedusen. Zool Jahrb 30:145-164.
24. Landschulz WH, Johnson PF, McKnight SL. 1988. The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins. Science 240:1759-1764.
25. Lekstrom-Himes JA. 2001. The role of CEPBε in the terminal stages of granulocyte differentiation. Stem Cells 19:125-133.
26. Lekstrom-Himes JA, Xanthopoulos KG. 1998. Biological role of the CCAAT/enhancer-binding protein family of transcription factors. J Biol Chem 273:28545-28548.
27. Li MA, Alls JD, Avancini RM, Koo K, Godt D. 2003. The large Maf factor traffic jam controls gonad morphogenesis in Drosophila. Nat Cell Biol 5:994-1000.
28. Lupas A. 1996. Coiled coils: new structures and new functions. Trends Biochem Sci 21:375-382.
29. Manzanares M, Cordes S, Kwan CT, Sham MH, Barsh GS, Krumlauf R. 1997. Segmental regulation of Hoxb-3 by kreisler. Nature 387:191-195.
30. McKnight SL. 2001. McBindall: a better name for CCAAT/enhancer binding proteins? Cell 107:259-261.
31. McKnight SL, Lane MD, Gluecksohn-Waelsch S. 1989. Is CCAAT/enhancer- binding protein a central regulator of energy metabolism? Genes Dev 3:2021-2024.
32. Moitra J, Szilak L, Krylov D, Vinson C. 1997. Leucine is the most stabilizing aliphatic amino acid in the d position of a dimeric leucine zipper coiled coil. Biochemistry 36:12567-12573.
33. Montell DJ, Rorth P, Spradling AC. 1992. Slow border cells, a locus required for a developmentally regulated cell migration during oogenesis, encodes Drosophila C/EBP. Cell 71:51-62.
34. Müller P, Buchal, 1973. Wilhelm Rouxs Arch 137:122-135.
35. Müller P, Yanze N, Schmid V, Spring J. 1999. The homeobox gene otx of the jellyfish Podocoryne carnea: role of a head gene in striated muscle and evolution. Dev Biol 216:582-594.
36. Müller P, Seipel K, Yanze N, Reber-Müller S, Streitwolf-Engel R, Stierwald S, Spring J, Schmid V. 2003. Evolutionary aspects of developmentally regulated helix-loop-helix transcription factors in striated muscle of jellyfish. Dev Biol 255:216-229.
37. Pall M, Hellberg P, Brännström M, Mikuni M, Peterson CM, Sundfeldt K, Norden B, Hedin L, Enerbäck S. 1997. The transcription factor C/EBP-β and its role in ovarian function; evidence for direct involvement in the ovulatory process. EMBO J 16:5273-5279.
38. Pouponnot C, Nishizawa M, Calothy G, Pierani A. 1995. Transcriptional stimulation of the retina-specific QR1 gene upon growth arrest involves a Maf-related protein. Mol Cell Biol 15:5563-5575.
39. Ramji DP, Foka P. 2002. CCAAT/enhancer binding proteins: structure, function and regulation. Biochem J 365:561-575.
40. Ron D, Habener JF. 1992. CHOP, a novel developmentally regulated nuclear protein that dimerizes with transcription factors C/EBP and LAP and functions as a dominant-negative inhibitor of gene transcription. Genes Dev 6:439-453.
41. Rorth P, Montell DJ. 1992. Drosophila C/EBP: a tissue-specific DNA-binding protein required for embryonic development. Genes Dev 6:2299-2311.
42. Sambrook J, Russell DW. 2001. Molecular cloning: a laboratory manual. 3rd ed. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
43. Schmid V. 1972. Untersuchungen über Dedifferenzierungsvorgänge bei Medusen-knospen und Medusen von Podocoryne carnea M. Sars. Wilhelm Rouxs Arch 169:281-307.
44. Schmid V. 1992. Transdifferentiation in medusae. Int Rev Cytol 142:213-261.
45. Schmid V, Alder H. 1984. Isolated, mononucleated, striated muscle can undergo pluripotent transdifferentiation and form a complex regenerate. Cell 38:801-809.
46. Schmid V, Reber-Müller S. 1995. Transdifferentiation of isolated striated muscle of jellyfish in vitro: the initiation process. Semin Cell Biol 6:109-116.
47. Schmidt HA, Strimmer K, Vingron M, von Haeseler A. 2002. TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18:502-504.
48. Seipel K, Yanze N, Schmid V. 2004. Developmental and evolutionary aspects of the basic helix-loop-helix transcription factors Atonal-like 1 and Achaetescute homolog 2 in the jellyfish. Dev Biol, in press.
49. Shen CN, Slack JMW, Tosh D. 2000. Molecular basis of transdifferentiation of pancreas to liver. Nat Cell Biol 2:879-887.
50. Spring J, Yanze N, Middel AM, Stierwald M, Gröger H, Schmid V. 2000. The mesoderm specification factor twist in the life cycle of jellyfish. Dev Biol 228:363-375.
51. Spring J, Yanze N, Jösch C, Middel AM, Winninger B, Schmid V. 2002. Conservation of Brachyury, Mef2 and Snail In the myogenic lineage of jellyfish: a connection to the mesoderm of bilateria. Dev Biol 244:372-384.
52. Sterneck E, Tessarollo L, Johnson PF. 1997. An essential role for C/EBPβ in female reproduction. Genes Dev 11:2153-2162.
53. Swaroop A, Xu JZ, Pawar H, Jackson A, Skolnick C, Agarwal N. 1992. A conserved retina-specific gene encodes a basic motif/leucine zipper domain. Proc Natl Acad Sci U S A 89:266-270.
54. Tardent P. 1978. Entwicklungsperioden. In: Seidel F, editor. Morphogenese der Tiere: Einleitung zum Gesamtwerk Morphogenetische Arbeitsmethoden und Begriffssysteme (Coelenterata, Cnidaria). Jena: Fischer Verlag. p 199-222.
55. Veraska A, McGinnis N, Li X, Mohler J, McGinnis W. 2000. Cap 'n' colar B cooperates with a small Maf subunit to specify pharyngeal development and suppress deformed homeotic function in the Drosophila head. Development 127:4023-4037.
56. Vinson C, Myakishev M, Acharya A, Mir AA, Moll JR, Bonovich M. 2002. Classification of human b-zip proteins based on dimerization properties. Mol Cell Biol 22:6321-6335.
57. Wang ND, Finegold MJ, Bradley A, Ou CN, Abdelsayed SV, Wilde MD, Taylor LR, Wilson DR, Darlington GJ. 1995. Impaired energy homeostasis in C/EBP alpha knockout mice. Science 269:1108-1112.
58. Yanze N, Gröger H, Müller P, Schmid V. 1999. Reversible inactivation of cell-type specific regulatory and structural genes in migrating isolated striated muscle cells of jellyfish. Dev Biol 213:194-201.
59. Yanze N, Spring J, Schmidli C, Schmid V. 2001. Conservation of Hox/ParaHox-related genes in the early development of a cnidarian. Dev Biol 236:89-98.