LogoBar: Bar graph visualization of protein logos with gaps

Bioinformatics

Volumn 22, Issue 1, 2006, Pages 112-114

  Pérez Bercoff, Åsa ^a,b,c   Koch, Johan ^a,b   Bürglin, Thomas R ^a,b  

^a KAROLINSKA INSTITUTE   (Sweden)

^b School of Life Sciences Södertörn University   (Sweden)

^c CHALMERS UNIVERSITY OF TECHNOLOGY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; BIOINFORMATICS; COMPUTER PROGRAM; GENETIC ALGORITHM; INFORMATION PROCESSING; PRIORITY JOURNAL; SEQUENCE ALIGNMENT;

EID: 30344446662     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti761     Document Type: Article

References (5)

1. Chenna,R. et al. (2003) Multiple sequence alignment with the clustal series of programs. Nucleic Acids Res., 31, 3497-3500.
2. Crooks,G. et al. (2004) WebLogo: A sequence logo generator. Genome Res., 14, 1188-1190.
3. Gorodkin,J. et al. (1997) Displaying the information contents of structural RNA alignments: The structure logos. Comput. Appl. Biosci., 13, 583-386.
4. Schneider,T.D. and Stephens,M.R. (1990) Sequence logos: A new way to display consensus sequences. Nucleic Acids Res., 18, 6097-6100.
5. Thompson,J.D. et al. (1997) The elustal x windows interface: Flexible strategies for multiple alignment aided by quality analysis tools. Nucleic Acids Res., 25, 4876-4882.