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Volumn 284, Issue 3, 1998, Pages 633-646

Primer-template misalignments during leading strand DNA synthesis account for the most frequent spontaneous mutations in a quasipalindromic region in Escherichia coli

Author keywords

DNA replication; Duplication mutation; Intermolecular strand switch; Quasipalindrome; Spontaneous DNA secondary structure mutagenesis

Indexed keywords

PALINDROMIC DNA;

EID: 0032484153     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1998.2193     Document Type: Article
Times cited : (30)

References (28)
  • 1
    • 0019996193 scopus 로고
    • On the formation of spontaneous mutations: The importance of short sequence homologies in generation of large deletion
    • Albertini, A. M., Hofer, M., Calos, M. P. & Miller, J. H. (1982). On the formation of spontaneous mutations: the importance of short sequence homologies in generation of large deletion. Cell, 29, 319-328.
    • (1982) Cell , vol.29 , pp. 319-328
    • Albertini, A.M.1    Hofer, M.2    Calos, M.P.3    Miller, J.H.4
  • 2
    • 0024326169 scopus 로고
    • Overlapping direct repeats stimulate deletions in specifically designed derivatives of plasmid pBR325 in Escherichia coli
    • Balbinder, E., Mac, Vean C. & Williams, R. E. (1989). Overlapping direct repeats stimulate deletions in specifically designed derivatives of plasmid pBR325 in Escherichia coli. Mutat. Res. 214, 233-252.
    • (1989) Mutat. Res. , vol.214 , pp. 233-252
    • Balbinder, E.1    Mac, V.C.2    Williams, R.E.3
  • 3
    • 0019787390 scopus 로고
    • Variants of a cloned synthetic lactose operator. II. Chloramphenicol-resistant revertants retaining a lactose operator in the CAT gene of plasmid pBR325
    • Betz, J. L. & Sadler, J. R. (1981). Variants of a cloned synthetic lactose operator. II. Chloramphenicol-resistant revertants retaining a lactose operator in the CAT gene of plasmid pBR325. Gene, 15, 187-200.
    • (1981) Gene , vol.15 , pp. 187-200
    • Betz, J.L.1    Sadler, J.R.2
  • 4
    • 0026794308 scopus 로고
    • Base mispair extension kinetics binding of avian myeloblastosis reverse transcriptase to matched and mismatched base-pair termini
    • Creighton, S., Huang, M., Cai, H., Arnheim, N. & Goodman, M. F. (1992). Base mispair extension kinetics binding of avian myeloblastosis reverse transcriptase to matched and mismatched base-pair termini. J. Biol. Chem. 4, 2633-2639.
    • (1992) J. Biol. Chem. , vol.4 , pp. 2633-2639
    • Creighton, S.1    Huang, M.2    Cai, H.3    Arnheim, N.4    Goodman, M.F.5
  • 5
    • 0018242793 scopus 로고
    • Genetic studies of the lac repressor on the molecular nature of spontaneous hotspots in the Lad gene of Escherichia coli
    • Farabaugh, P. J., Schmeissner, U., Hofer, M. & Miller, J. H. (1978). Genetic studies of the lac repressor on the molecular nature of spontaneous hotspots in the Lad gene of Escherichia coli. J. Mol. Biol. 126, 847-857.
    • (1978) J. Mol. Biol. , vol.126 , pp. 847-857
    • Farabaugh, P.J.1    Schmeissner, U.2    Hofer, M.3    Miller, J.H.4
  • 6
    • 0021324522 scopus 로고
    • Structural intermediates of deletion mutagenesis: A role for palindromic DNA
    • Glickman, B. W. & Ripley, L. S. (1984). Structural intermediates of deletion mutagenesis: a role for palindromic DNA. Proc. Natl Acad. Sci. USA, 81, 512-516.
    • (1984) Proc. Natl Acad. Sci. USA , vol.81 , pp. 512-516
    • Glickman, B.W.1    Ripley, L.S.2
  • 8
    • 0028920239 scopus 로고
    • DNA nick processing by exonuclease and polymerase activities of bacteriophage T4 DNA polymerase accounts for acridine-induced mutation specificities in T4
    • Kaiser, V. L. & Ripley, L. S. (1995). DNA nick processing by exonuclease and polymerase activities of bacteriophage T4 DNA polymerase accounts for acridine-induced mutation specificities in T4. Proc. Natl Acad. Sci. USA, 92, 2234-2238.
    • (1995) Proc. Natl Acad. Sci. USA , vol.92 , pp. 2234-2238
    • Kaiser, V.L.1    Ripley, L.S.2
  • 9
    • 0021038037 scopus 로고
    • Viability of lambda phages carrying a perfect palindrome in the absence of recombination nucleases
    • Leach, D. R. F. & Stahl, R. W. (1983). Viability of lambda phages carrying a perfect palindrome in the absence of recombination nucleases. Nature, 305, 448-451.
    • (1983) Nature , vol.305 , pp. 448-451
    • Leach, D.R.F.1    Stahl, R.W.2
  • 10
    • 0025163907 scopus 로고
    • Base mispair extension kinetics: Comparison of DNA polymerase alpha and reverse transcriptase
    • Mendelman, L. V., Petruska, J. & Goodman, M. F. (1990). Base mispair extension kinetics: comparison of DNA polymerase alpha and reverse transcriptase. J. Biol. Chem. 265, 2338-2346.
    • (1990) J. Biol. Chem. , vol.265 , pp. 2338-2346
    • Mendelman, L.V.1    Petruska, J.2    Goodman, M.F.3
  • 11
    • 0024362884 scopus 로고
    • Polymerase-specific differences in the DNA intermediates of frameshift mutagenesis. In vitro synthesis errors of Escherichia coli DNA polymerase I and its large fragment derivative
    • Papanicolaou, C. & Ripley, L. S. (1989). Polymerase-specific differences in the DNA intermediates of frameshift mutagenesis. In vitro synthesis errors of Escherichia coli DNA polymerase I and its large fragment derivative. J. Mol. Biol. 207, 335-353.
    • (1989) J. Mol. Biol. , vol.207 , pp. 335-353
    • Papanicolaou, C.1    Ripley, L.S.2
  • 12
    • 0025998864 scopus 로고
    • An in vitro approach to identifying specificity determinants of mutagenesis mediated by DNA misalignments
    • Papanicolaou, C. & Ripley, L. S. (1991). An in vitro approach to identifying specificity determinants of mutagenesis mediated by DNA misalignments. J. Mol. Biol. 221, 805-821.
    • (1991) J. Mol. Biol. , vol.221 , pp. 805-821
    • Papanicolaou, C.1    Ripley, L.S.2
  • 13
    • 0000486352 scopus 로고    scopus 로고
    • Slipped strand DNA, dynamic mutations, and human disease
    • Wells, R. D. & Warren, S. T., eds, Academic Press, USA
    • Pearson, C. E. & Sinden, R. R. (1998). Slipped strand DNA, dynamic mutations, and human disease. In Genetic Instabilities and Hereditary Neurological Disorders (Wells, R. D. & Warren, S. T., eds), pp. 585-621, Academic Press, USA.
    • (1998) Genetic Instabilities and Hereditary Neurological Disorders , pp. 585-621
    • Pearson, C.E.1    Sinden, R.R.2
  • 14
    • 0024853870 scopus 로고
    • Extension of mismatched 3′ termini of DNA is a major determinant of the infidelity of human immunodeficiency virus type 1 reverse transcriptase
    • Perrino, F. W., Preston, B. D., Sandell, L. L. & Loeb, L. A. (1989). Extension of mismatched 3′ termini of DNA is a major determinant of the infidelity of human immunodeficiency virus type 1 reverse transcriptase. Proc. Natl Acad. Sci. USA, 86, 8343-8347.
    • (1989) Proc. Natl Acad. Sci. USA , vol.86 , pp. 8343-8347
    • Perrino, F.W.1    Preston, B.D.2    Sandell, L.L.3    Loeb, L.A.4
  • 15
    • 0025862207 scopus 로고
    • The effect of the length of direct repeats and the presence of palindromes on deletion between directly repeated DNA sequences in bacteriophage T7
    • Pierce, J. C., Kong, D. & Masker, W. (1991). The effect of the length of direct repeats and the presence of palindromes on deletion between directly repeated DNA sequences in bacteriophage T7. Nucl. Acids Res. 14, 3901-3905.
    • (1991) Nucl. Acids Res. , vol.14 , pp. 3901-3905
    • Pierce, J.C.1    Kong, D.2    Masker, W.3
  • 16
    • 0019996140 scopus 로고
    • Model for the participation of quasi-palindromic DNA sequences in frameshift mutation
    • Ripley, L. S. (1982). Model for the participation of quasi-palindromic DNA sequences in frameshift mutation. Proc. Natl Acad. Sci. USA, 79, 4128-4132.
    • (1982) Proc. Natl Acad. Sci. USA , vol.79 , pp. 4128-4132
    • Ripley, L.S.1
  • 17
    • 0025630591 scopus 로고
    • Frameshift mutation: Determinants of specificity
    • Ripley, L. S. (1990). Frameshift mutation: determinants of specificity. Annu. Rev. Genet. 24, 189-213.
    • (1990) Annu. Rev. Genet. , vol.24 , pp. 189-213
    • Ripley, L.S.1
  • 18
    • 0029161151 scopus 로고
    • Differential DNA secondary structure mediated deletion mutagenesis in the leading and lagging strands
    • Rosche, W. A., Trinh, T. Q. & Sinden, R. R. (1995). Differential DNA secondary structure mediated deletion mutagenesis in the leading and lagging strands. J. Bacteriol. 177, 4385-4391.
    • (1995) J. Bacteriol. , vol.177 , pp. 4385-4391
    • Rosche, W.A.1    Trinh, T.Q.2    Sinden, R.R.3
  • 19
    • 0031556020 scopus 로고    scopus 로고
    • Leading strand specific spontaneous mutation corrects a quasi-palindrome by an intermolecular strand switch mechanism
    • Rosche, W. A., Trinh, T. Q. & Sinden, R. R. (1997). Leading strand specific spontaneous mutation corrects a quasi-palindrome by an intermolecular strand switch mechanism. J. Mol. Biol. 269, 176-187.
    • (1997) J. Mol. Biol. , vol.269 , pp. 176-187
    • Rosche, W.A.1    Trinh, T.Q.2    Sinden, R.R.3
  • 20
    • 0022446219 scopus 로고
    • Mechanisms of spontaneous mutagenesis: An analysis of the spectrum of spontaneous mutations in Escherichia coil LacI gene
    • Schaaper, R. M., Danforth, B. N. & Glickman, B. W. (1986). Mechanisms of spontaneous mutagenesis: an analysis of the spectrum of spontaneous mutations in Escherichia coil LacI gene. J. Mol. Biol. 189, 273-284.
    • (1986) J. Mol. Biol. , vol.189 , pp. 273-284
    • Schaaper, R.M.1    Danforth, B.N.2    Glickman, B.W.3
  • 22
    • 0026352538 scopus 로고
    • On the deletion of inverted repeated DNA in Escherichia coli: Effects of length, thermal stability, and cruciform formation in vivo
    • Sinden, R. R., Zheng, G., Brankamp, R. G. & Allen, K. N (1991). On the deletion of inverted repeated DNA in Escherichia coli: effects of length, thermal stability, and cruciform formation in vivo. Genetics, 129, 991-1005.
    • (1991) Genetics , vol.129 , pp. 991-1005
    • Sinden, R.R.1    Zheng, G.2    Brankamp, R.G.3    Allen, K.N.4
  • 25
    • 0026419949 scopus 로고
    • Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coli
    • Trinh, T. Q. & Sinden, R. R. (1991). Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coli. Nature, 352, 544-547.
    • (1991) Nature , vol.352 , pp. 544-547
    • Trinh, T.Q.1    Sinden, R.R.2
  • 26
    • 0027309530 scopus 로고
    • The influence of primary and secondary DNA structure in deletion and duplication between direct repeats in Escherichia coli
    • Trinh, T. Q. & Sinden, R. R. (1993). The influence of primary and secondary DNA structure in deletion and duplication between direct repeats in Escherichia coli. Genetics, 134, 409-422.
    • (1993) Genetics , vol.134 , pp. 409-422
    • Trinh, T.Q.1    Sinden, R.R.2
  • 27
    • 0010321446 scopus 로고    scopus 로고
    • The spectrum of acridine resistant mutants of bacteriophage T4 reveals cryptic effects of the tsL141 DNA polymerase allele on spontaneous mutagenesis
    • Wang, F. J. & Ripley, L. S. (1998). The spectrum of acridine resistant mutants of bacteriophage T4 reveals cryptic effects of the tsL141 DNA polymerase allele on spontaneous mutagenesis. Genetics, 148, 1655-1665.
    • (1998) Genetics , vol.148 , pp. 1655-1665
    • Wang, F.J.1    Ripley, L.S.2
  • 28
    • 0024504891 scopus 로고
    • Palindromy and the location of deletion endpoints in Escherichia coli
    • Weston-Hafer, K. & Berg, D. E. (1989). Palindromy and the location of deletion endpoints in Escherichia coli. Genetics, 121, 651-658.
    • (1989) Genetics , vol.121 , pp. 651-658
    • Weston-Hafer, K.1    Berg, D.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.