-
1
-
-
0034743423
-
A regulatory cascade of three homeobox genes, ceh-10, ttx-3 and ceh-23, controls cell fate specification of a defined interneuron class in C. elegans
-
Altun-Gultekin Z. Andachi Y. Tsalik E.L. Pilgrim D. Kohara Y. Hobert O. A regulatory cascade of three homeobox genes, ceh-10, ttx-3 and ceh-23, controls cell fate specification of a defined interneuron class in C. elegans Development 128 2001 1951-1969
-
(2001)
Development
, vol.128
, pp. 1951-1969
-
-
Altun-Gultekin, Z.1
Andachi, Y.2
Tsalik, E.L.3
Pilgrim, D.4
Kohara, Y.5
Hobert, O.6
-
2
-
-
0037169029
-
Immunoglobulin-domain proteins required for maintenance of ventral nerve cord organization
-
Aurelio O. Hall D.H. Hobert O. Immunoglobulin-domain proteins required for maintenance of ventral nerve cord organization Science 295 2002 686-690
-
(2002)
Science
, vol.295
, pp. 686-690
-
-
Aurelio, O.1
Hall, D.H.2
Hobert, O.3
-
3
-
-
0032509484
-
Neurobiology of the Caenorhabditis elegans genome
-
Bargmann C.I. Neurobiology of the Caenorhabditis elegans genome Science 282 1998 2028-2033
-
(1998)
Science
, vol.282
, pp. 2028-2033
-
-
Bargmann, C.I.1
-
4
-
-
17144456808
-
Positive feedback in eukaryotic gene networks: Cell differentiation by graded to binary response conversion
-
Becskei A. Seraphin B. Serrano L. Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion EMBO J. 20 2001 2528-2535
-
(2001)
EMBO J.
, vol.20
, pp. 2528-2535
-
-
Becskei, A.1
Seraphin, B.2
Serrano, L.3
-
5
-
-
2942521105
-
CisOrtho: A program pipeline for genome-wide identification of transcription factor target genes using phylogenetic footprinting
-
Bigelow H. Wenick A.S. Wong A. Hobert O. CisOrtho: a program pipeline for genome-wide identification of transcription factor target genes using phylogenetic footprinting BMC Bioinformatics 5 2004 27
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 27
-
-
Bigelow, H.1
Wenick, A.S.2
Wong, A.3
Hobert, O.4
-
6
-
-
0014690698
-
Gene regulation for higher cells: A theory
-
Britten R.J. Davidson E.H. Gene regulation for higher cells: a theory Science 165 1969 349-357
-
(1969)
Science
, vol.165
, pp. 349-357
-
-
Britten, R.J.1
Davidson, E.H.2
-
7
-
-
13344249785
-
Ocular retardation mouse caused by Chx10 homeobox null allele: Impaired retinal progenitor proliferation and bipolar cell differentiation
-
Burmeister M. Novak J. Liang M.Y. Basu S. Ploder L. Hawes N.L. Vidgen D. Hoover F. Goldman D. Kalnins V.I. et al. Ocular retardation mouse caused by Chx10 homeobox null allele: impaired retinal progenitor proliferation and bipolar cell differentiation Nat. Genet. 12 1996 376-384
-
(1996)
Nat. Genet.
, vol.12
, pp. 376-384
-
-
Burmeister, M.1
Novak, J.2
Liang, M.Y.3
Basu, S.4
Ploder, L.5
Hawes, N.L.6
Vidgen, D.7
Hoover, F.8
Goldman, D.9
Kalnins, V.I.10
-
10
-
-
0023729682
-
The sequence specificity of homeodomain-DNA interaction
-
Desplan C. Theis J. O'Farrell P.H. The sequence specificity of homeodomain-DNA interaction Cell 54 1988 1081-1090
-
(1988)
Cell
, vol.54
, pp. 1081-1090
-
-
Desplan, C.1
Theis, J.2
O'Farrell, P.H.3
-
11
-
-
0034425404
-
Human microphthalmia associated with mutations in the retinal homeobox gene CHX10
-
Ferda Percin E. Ploder L.A. Yu J.J. Arici K. Horsford D.J. Rutherford A. Bapat B. Cox D.W. Duncan A.M. Kalnins V.I. et al. Human microphthalmia associated with mutations in the retinal homeobox gene CHX10 Nat. Genet. 25 2000 397-401
-
(2000)
Nat. Genet.
, vol.25
, pp. 397-401
-
-
Ferda Percin, E.1
Ploder, L.A.2
Yu, J.J.3
Arici, K.4
Horsford, D.J.5
Rutherford, A.6
Bapat, B.7
Cox, D.W.8
Duncan, A.M.9
Kalnins, V.I.10
-
12
-
-
0031883750
-
Identification of Caenorhabditis elegans genes required for neuronal differentiation and migration
-
Forrester W.C. Perens E. Zallen J.A. Garriga G. Identification of Caenorhabditis elegans genes required for neuronal differentiation and migration Genetics 148 1998 151-165
-
(1998)
Genetics
, vol.148
, pp. 151-165
-
-
Forrester, W.C.1
Perens, E.2
Zallen, J.A.3
Garriga, G.4
-
13
-
-
0025328511
-
Novel cysteine-rich motif and homeodomain in the product of the Caenorhabditis elegans cell lineage gene lin-11
-
Freyd G. Kim S.K. Horvitz H.R. Novel cysteine-rich motif and homeodomain in the product of the Caenorhabditis elegans cell lineage gene lin-11 Nature 344 1990 876-879
-
(1990)
Nature
, vol.344
, pp. 876-879
-
-
Freyd, G.1
Kim, S.K.2
Horvitz, H.R.3
-
14
-
-
0036468361
-
Regulation of organogenesis by the Caenorhabditis elegans FoxA protein PHA-4
-
Gaudet J. Mango S.E. Regulation of organogenesis by the Caenorhabditis elegans FoxA protein PHA-4 Science 295 2002 821-825
-
(2002)
Science
, vol.295
, pp. 821-825
-
-
Gaudet, J.1
Mango, S.E.2
-
15
-
-
0030934415
-
Cis regulatory requirements for hypodermal cell-specific expression of the Caenorhabditis elegans cuticle collagen gene dpy-7
-
Gilleard J.S. Barry J.D. Johnstone I.L. cis regulatory requirements for hypodermal cell-specific expression of the Caenorhabditis elegans cuticle collagen gene dpy-7 Mol. Cell. Biol. 17 1997 2301-2311
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 2301-2311
-
-
Gilleard, J.S.1
Barry, J.D.2
Johnstone, I.L.3
-
16
-
-
0028997647
-
elt-2, a second GATA factor from the nematode Caenorhabditis elegans
-
Hawkins M.G. McGhee J.D. elt-2, a second GATA factor from the nematode Caenorhabditis elegans J. Biol. Chem. 270 1995 14666-14671
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 14666-14671
-
-
Hawkins, M.G.1
McGhee, J.D.2
-
17
-
-
0036214657
-
PCR fusion-based approach to create reporter gene constructs for expression analysis in transgenic C. elegans
-
Hobert O. PCR fusion-based approach to create reporter gene constructs for expression analysis in transgenic C. elegans Biotechniques 32 2002 728-730
-
(2002)
Biotechniques
, vol.32
, pp. 728-730
-
-
Hobert, O.1
-
18
-
-
0024298689
-
Divergent homeo box proteins recognize similar DNA sequences in Drosophila
-
Hoey T. Levine M. Divergent homeo box proteins recognize similar DNA sequences in Drosophila Nature 332 1988 858-861
-
(1988)
Nature
, vol.332
, pp. 858-861
-
-
Hoey, T.1
Levine, M.2
-
19
-
-
0037205228
-
HEN-1, a secretory protein with an LDL receptor motif, regulates sensory integration and learning in Caenorhabditis elegans
-
Ishihara T. Iino Y. Mohri A. Mori I. Gengyo-Ando K. Mitani S. Katsura I. HEN-1, a secretory protein with an LDL receptor motif, regulates sensory integration and learning in Caenorhabditis elegans Cell 109 2002 639-649
-
(2002)
Cell
, vol.109
, pp. 639-649
-
-
Ishihara, T.1
Iino, Y.2
Mohri, A.3
Mori, I.4
Gengyo-Ando, K.5
Mitani, S.6
Katsura, I.7
-
20
-
-
0027453705
-
A universal target sequence is bound in vitro by diverse homeodomains
-
Kalionis B. O'Farrell P.H. A universal target sequence is bound in vitro by diverse homeodomains Mech. Dev. 43 1993 57-70
-
(1993)
Mech. Dev.
, vol.43
, pp. 57-70
-
-
Kalionis, B.1
O'Farrell, P.H.2
-
21
-
-
0035860551
-
A gene expression map for Caenorhabditis elegans
-
Kim S.K. Lund J. Kiraly M. Duke K. Jiang M. Stuart J.M. Eizinger A. Wylie B.N. Davidson G.S. A gene expression map for Caenorhabditis elegans Science 293 2001 2087-2092
-
(2001)
Science
, vol.293
, pp. 2087-2092
-
-
Kim, S.K.1
Lund, J.2
Kiraly, M.3
Duke, K.4
Jiang, M.5
Stuart, J.M.6
Eizinger, A.7
Wylie, B.N.8
Davidson, G.S.9
-
22
-
-
0037404073
-
Cis-regulatory control of three cell fate-specific genes in vulval organogenesis of Caenorhabditis elegans and C. briggsae
-
Kirouac M. Sternberg P.W. cis-regulatory control of three cell fate-specific genes in vulval organogenesis of Caenorhabditis elegans and C. briggsae Dev. Biol. 257 2003 85-103
-
(2003)
Dev. Biol.
, vol.257
, pp. 85-103
-
-
Kirouac, M.1
Sternberg, P.W.2
-
23
-
-
0034704768
-
Microarray analysis of the transcriptional network controlled by the photoreceptor homeobox gene Crx
-
Livesey F.J. Furukawa T. Steffen M.A. Church G.M. Cepko C.L. Microarray analysis of the transcriptional network controlled by the photoreceptor homeobox gene Crx Curr. Biol. 10 2000 301-310
-
(2000)
Curr. Biol.
, vol.10
, pp. 301-310
-
-
Livesey, F.J.1
Furukawa, T.2
Steffen, M.A.3
Church, G.M.4
Cepko, C.L.5
-
24
-
-
0442272486
-
A conserved postsynaptic transmembrane protein affecting neuromuscular signaling in Caenorhabditis elegans
-
Loria P.M. Hodgkin J. Hobert O. A conserved postsynaptic transmembrane protein affecting neuromuscular signaling in Caenorhabditis elegans J. Neurosci. 24 2004 2191-2201
-
(2004)
J. Neurosci.
, vol.24
, pp. 2191-2201
-
-
Loria, P.M.1
Hodgkin, J.2
Hobert, O.3
-
25
-
-
0029050820
-
Control of neuronal pathway selection by the Drosophila LIM homeodomain gene apterous
-
Lundgren S.E. Callahan C.A. Thor S. Thomas J.B. Control of neuronal pathway selection by the Drosophila LIM homeodomain gene apterous Development 121 1995 1769-1773
-
(1995)
Development
, vol.121
, pp. 1769-1773
-
-
Lundgren, S.E.1
Callahan, C.A.2
Thor, S.3
Thomas, J.B.4
-
26
-
-
0036777340
-
Decoding cis-regulatory DNAs in the Drosophila genome
-
Markstein M. Levine M. Decoding cis-regulatory DNAs in the Drosophila genome Curr. Opin. Genet. Dev. 12 2002 601-606
-
(2002)
Curr. Opin. Genet. Dev.
, vol.12
, pp. 601-606
-
-
Markstein, M.1
Levine, M.2
-
29
-
-
0029050730
-
Neural regulation of thermotaxis in Caenorhabditis elegans
-
Mori I. Ohshima Y. Neural regulation of thermotaxis in Caenorhabditis elegans Nature 376 1995 344-348
-
(1995)
Nature
, vol.376
, pp. 344-348
-
-
Mori, I.1
Ohshima, Y.2
-
30
-
-
0027930361
-
The Caenorhabditis elegans NK-2 class homeoprotein CEH-22 is involved in combinatorial activation of gene expression in pharyngeal muscle
-
Okkema P.G. Fire A. The Caenorhabditis elegans NK-2 class homeoprotein CEH-22 is involved in combinatorial activation of gene expression in pharyngeal muscle Development 120 1994 2175-2186
-
(1994)
Development
, vol.120
, pp. 2175-2186
-
-
Okkema, P.G.1
Fire, A.2
-
31
-
-
0027451263
-
Sequence requirements for myosin gene expression and regulation in Caenorhabditis elegans
-
Okkema P.G. Harrison S.W. Plunger V. Aryana A. Fire A. Sequence requirements for myosin gene expression and regulation in Caenorhabditis elegans Genetics 135 1993 385-404
-
(1993)
Genetics
, vol.135
, pp. 385-404
-
-
Okkema, P.G.1
Harrison, S.W.2
Plunger, V.3
Aryana, A.4
Fire, A.5
-
32
-
-
0030767662
-
Lhx2, a LIM homeobox gene, is required for eye, forebrain, and definitive erythrocyte development
-
Porter F.D. Drago J. Xu Y. Cheema S.S. Wassif C. Huang S.P. Lee E. Grinberg A. Massalas J.S. Bodine D. et al. Lhx2, a LIM homeobox gene, is required for eye, forebrain, and definitive erythrocyte development Development 124 1997 2935-2944
-
(1997)
Development
, vol.124
, pp. 2935-2944
-
-
Porter, F.D.1
Drago, J.2
Xu, Y.3
Cheema, S.S.4
Wassif, C.5
Huang, S.P.6
Lee, E.7
Grinberg, A.8
Massalas, J.S.9
Bodine, D.10
-
33
-
-
0031787969
-
Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation
-
Roth F.P. Hughes J.D. Estep P.W. Church G.M. Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation Nat. Biotechnol. 16 1998 939-945
-
(1998)
Nat. Biotechnol.
, vol.16
, pp. 939-945
-
-
Roth, F.P.1
Hughes, J.D.2
Estep, P.W.3
Church, G.M.4
-
34
-
-
0037194732
-
Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans
-
Roy P.J. Stuart J.M. Lund J. Kim S.K. Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans Nature 418 2002 975-979
-
(2002)
Nature
, vol.418
, pp. 975-979
-
-
Roy, P.J.1
Stuart, J.M.2
Lund, J.3
Kim, S.K.4
-
35
-
-
0025008168
-
Sequence logos: A new way to display consensus sequences
-
Schneider T.D. Stephens R.M. Sequence logos: a new way to display consensus sequences Nucleic Acids Res. 18 1990 6097-6100
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 6097-6100
-
-
Schneider, T.D.1
Stephens, R.M.2
-
37
-
-
2942607216
-
The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics
-
Stein, L.D., Bao, Z., Blasiar, D., Blumenthal, T., Brent, M.R., Chen, N., Chinwalla, A., Clarke, L., Clee, C., Coghlan, A., et al. (2003). The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.
-
(2003)
-
-
Stein, L.D.1
Bao, Z.2
Blasiar, D.3
Blumenthal, T.4
Brent, M.R.5
Chen, N.6
Chinwalla, A.7
Clarke, L.8
Clee, C.9
Coghlan, A.10
-
38
-
-
0033713259
-
The RFX-type transcription factor DAF-19 regulates sensory neuron cilium formation in C. elegans
-
Swoboda P. Adler H.T. Thomas J.H. The RFX-type transcription factor DAF-19 regulates sensory neuron cilium formation in C. elegans Mol. Cell 5 2000 411-421
-
(2000)
Mol. Cell
, vol.5
, pp. 411-421
-
-
Swoboda, P.1
Adler, H.T.2
Thomas, J.H.3
-
39
-
-
0023821768
-
Embryonic epsilon and gamma globin genes of a prosimian primate (Galago crassicaudatus). Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints
-
Tagle D.A. Koop B.F. Goodman M. Slightom J.L. Hess D.L. Jones R.T. Embryonic epsilon and gamma globin genes of a prosimian primate (Galago crassicaudatus). Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints J. Mol. Biol. 203 1988 439-455
-
(1988)
J. Mol. Biol.
, vol.203
, pp. 439-455
-
-
Tagle, D.A.1
Koop, B.F.2
Goodman, M.3
Slightom, J.L.4
Hess, D.L.5
Jones, R.T.6
-
40
-
-
0028825369
-
Divergent seven transmembrane receptors are candidate chemosensory receptors in C. elegans
-
Troemel E.R. Chou J.H. Dwyer N.D. Colbert H.A. Bargmann C.I. Divergent seven transmembrane receptors are candidate chemosensory receptors in C. elegans Cell 83 1995 207-218
-
(1995)
Cell
, vol.83
, pp. 207-218
-
-
Troemel, E.R.1
Chou, J.H.2
Dwyer, N.D.3
Colbert, H.A.4
Bargmann, C.I.5
-
41
-
-
0037490793
-
Functional mapping of neurons that control locomotory behavior in Caenorhabditis elegans
-
Tsalik E.L. Hobert O. Functional mapping of neurons that control locomotory behavior in Caenorhabditis elegans J. Neurobiol. 56 2003 178-197
-
(2003)
J. Neurobiol.
, vol.56
, pp. 178-197
-
-
Tsalik, E.L.1
Hobert, O.2
-
42
-
-
0142074784
-
LIM homeobox gene-dependent expression of biogenic amine receptors in restricted regions of the C. elegans nervous system
-
Tsalik E.L. Niacaris T. Wenick A.S. Pau K. Avery L. Hobert O. LIM homeobox gene-dependent expression of biogenic amine receptors in restricted regions of the C. elegans nervous system Dev. Biol. 263 2003 81-102
-
(2003)
Dev. Biol.
, vol.263
, pp. 81-102
-
-
Tsalik, E.L.1
Niacaris, T.2
Wenick, A.S.3
Pau, K.4
Avery, L.5
Hobert, O.6
-
44
-
-
0029960055
-
Transfac: A database on transcription factors and their dna binding sites
-
Wingender E. Dietze P. Karas H. Knuppel R. Transfac: a database on transcription factors and their dna binding sites Nucleic Acids Res. 24 1996 238-241
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 238-241
-
-
Wingender, E.1
Dietze, P.2
Karas, H.3
Knuppel, R.4
-
45
-
-
0037130197
-
Identification of genes expressed in C. elegans touch receptor neurons
-
Zhang Y. Ma C. Delohery T. Nasipak B. Foat B.C. Bounoutas A. Bussemaker H.J. Kim S.K. Chalfie M. Identification of genes expressed in C. elegans touch receptor neurons Nature 418 2002 331-335
-
(2002)
Nature
, vol.418
, pp. 331-335
-
-
Zhang, Y.1
Ma, C.2
Delohery, T.3
Nasipak, B.4
Foat, B.C.5
Bounoutas, A.6
Bussemaker, H.J.7
Kim, S.K.8
Chalfie, M.9
|