Three-dimensional solution structures of the chromodomains of cpSRP43

Journal of Biological Chemistry

Volumn 280, Issue 50, 2005, Pages 41465-41471

  Sivaraja, Vaithiyalingam ^a   Kumar, Thallapuranam Krishnaswanny Suresh ^a   Leena, Philominathan Sagaya Theresa ^a   Chang, An Ni ^b   Vidya, Chitturi ^a   Goforth, Robyn L ^a   Rajalingam, Dakshinamurthy ^a   Arvind, Kannan ^a   Ye, Jiang Liang ^c   Chou, Jonathan ^d   Henry, Ralph ^a   Yu, Chin ^a,b  

^a UNIVERSITY OF ARKANSAS   (United States)

^b NATIONAL TSING HUA UNIVERSITY   (Taiwan)

^c XIAMEN UNIVERSITY   (China)

^d Gentara Corporation   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; CALORIMETRY; CELLS; MOLECULAR STRUCTURE; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PROTEINS; RNA;

CHLOROPLASTS; HELICAL SEGMENT; SIGNAL RECOGNITION PARTICLE (CPSRP); SOLUTION STRUCTURES;

PIGMENTS;

GUANOSINE TRIPHOSPHATASE; PROTEIN CPSRP43; PROTEIN CPSRP54; PROTEIN SUBUNIT; RNA; SIGNAL RECOGNITION PARTICLE; UNCLASSIFIED DRUG;

ARTICLE; BETA SHEET; CARBOXY TERMINAL SEQUENCE; CHLOROPLAST; CYTOPLASM; GENETIC CONSERVATION; ISOTHERMAL TITRATION CALORIMETRY; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN PROTEIN INTERACTION; PROTEIN SECONDARY STRUCTURE; PROTEIN STRUCTURE;

AMINO ACID MOTIFS; AMINO ACID SEQUENCE; BINDING SITES; CALORIMETRY; CHLOROPLASTS; CYTOPLASM; ESCHERICHIA COLI; LIGHT-HARVESTING PROTEIN COMPLEXES; MAGNETIC RESONANCE SPECTROSCOPY; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PHOTOSYNTHETIC REACTION CENTER COMPLEX PROTEINS; PLANT PROTEINS; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; RNA; SEQUENCE HOMOLOGY, AMINO ACID; SIGNAL RECOGNITION PARTICLE;

EID: 29244433507     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M507077200     Document Type: Article

References (35)

1. Schnell, D. J. (2000) Essays Biochem. 36, 47-59
2. Soll, J., and Schleiff E. (2004) Nat. Rev. Mol. Cell Biol. 5, 198-208
3. Cline, K. (2003) in Light-Harvesting Antennas in Photosynthesis (Advances in Photosynthesis and Respiration) (Green B., and Parson W., eds) pp. 353-372, Kluwer Academic Publishers, Norwell, MA
4. Eichacker, L. A., and Henry, R. (2001) Biochim. Biophys. Acta 1541, 120-134
5. Schuenemann, D. (2004) Curr. Genet. 44, 295-304
6. Pool, M. R. (2005) Mol. Membr. Biol. 22, 3-15
7. Groves, M. R., Man, A., Kahn, A., Koch, J., Dubel, S., Robinson, C., and Sinning, I. (2001) J. Biol. Chem. 276, 27778-27786
8. Funke, S., Knechten, T., Ollesch, J., and Schuenemann, D. (2005) J. Biol. Chem. 280, 8912-8917
9. Jonas-Straube, E., Hutin, C., Hoffman, N. E., and Schuenemann, D. (2001) J. Biol. Chem. 276, 24654-24660
10. Goforth, R. L., Peterson, E. C., Yuan, J., Moore, M. J., Kight, A. D., Lohse, M. B., Sakon, J., and Henry, R. (2004) J. Biol. Chem. 279, 43077-43084
11. Bork, P. (1993) Proteins 17, 363-374
12. Heringa, J. (1998) Curr. Opin. Struct. Biol. 8, 338-345
13. Mosavi, L. K., Cammett, T. J., Desrosiers, D. C., and Peng, Z. (2004) Protein Sci. 13, 1435-1448
14. Eissenberg, J. C. (2001) Gene (Amst.) 275, 19-29
15. Keeler, J., Clowes, R. T., Davis, A. L., and Laue, E. D. (1994) Methods Enzymol. 239, 145-207
16. Kay, L. E., Xu, G. Y., and Yamazaki, T. (1994) J. Magn. Reson. A 109, 129-133
17. Glore, G. M., and Grononborn, A. M. (1994) Methods Enzymol. 239, 349-363
18. Bax, A., and Ikura, M. (1991) J. Biomol. NMR 1, 99-104
19. Wittekind, M., and Muller, L. (1993) J. Magn. Reson. B 101, 201-205
20. Bax, A., and Grzesiek, S. (1993) Acc. Chem. Res. 26, 131-138
21. Vuister, G. W., and Bax, A. (1993) J. Am. Chem. Soc. 115, 7772-7777
22. Wishart, D. S., Bigam, C. G., Yao, J., Abidgaard, F., Dyson, H. J., Oldfield, E., Markeley, J., and Sykes, B. D. (1995) J. Biomol. NMR 6, 135-140
23. Godderd, T. D., and Kneller, D. G. Sparky3, University of California, San Francisco
24. Brunger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kuntsleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simenson, T., and Warren, G. L. (1998) Acta Crystallogr. Sect. D Biol. Crystallogr. 54, 905-921
25. Laskowski, R. A., Rullmannn, J. A., MacArthur, M. W., Kaptein, R., and Thornton, J. M. (1996) J. Biomol. NMR 8, 477-486
26. Koradi, R., Billetier, M., and Wuthrich, K. (1996) J. Mol. Graph. 14, 51-55
27. Sreerama, N., and Woody, R. W. (2004) Methods Enzymol. 383, 318-351
28. Nielsen, P. R., Nietlispach, D., Buscaino, A., Warner, R. J., Akhtar, A., Murzin, A. G., Murzina, N. V., and Laue, E. D. (2005) J. Biol. Chem. 280, 32326-32331
29. Baumann, H., Knapp, S., Karshikoff, A., Ladenstein, R., and Hard, T. (1995) J. Mol. Biol. 247, 840-846
30. Nielsen, P. R., Nietlispach, D., Mott, H. R., Callaghen, J., Bannuster, A., Kouzarides, T., Murzin, A. G., Murzina, N., and Laue, E. D. (2002) Nature 416, 103-107
31. Horita, D. A., Ivanova, A. V., Altieri, A. S., Klar, A. J., and Byrd, R. A. (2001) J. Mol. Biol. 307, 861-870
32. Ball, L. J., Murzina, N. V., Broadburst, R. W., Raine, A. R., Archer, S. J., Stott, F. J., Murzin, A. G., Singh, P. B., Dornaille, P. J., and Laue, E. D. (1997) EMBO J. 16, 2473-2481
33. Elcock, A. H., Sept, D., and McCammon, J. A. (2001) J. Phys. Chem. 105, 1504-1518
34. Turnbull, W. B., and Daranes, A. H. (2003) J. Am. Chem. Soc. 125, 14859-14866
35. Zhang, T., and Johansson, J. S. (2003) Biophys. J. 85, 3279-3285