메뉴 건너뛰기




Volumn 71, Issue 12, 2005, Pages 8042-8048

Microarray-based detection and typing of the rhizobium nodulation gene nodC: Potential of DNA arrays to diagnose biological functions of interest

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; DIAGNOSIS; DNA; GENETIC ENGINEERING; PROTEINS; STATISTICAL METHODS;

EID: 29144459277     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.71.12.8042-8048.2005     Document Type: Article
Times cited : (24)

References (39)
  • 1
    • 4544269622 scopus 로고    scopus 로고
    • Analysis of Rhizobium etli and of its symbiosis with wild Phaseolus vulgaris supports coevolution in centers of host diversification
    • Aguilar, O. M., O. Riva, and E. Peltzer. 2004. Analysis of Rhizobium etli and of its symbiosis with wild Phaseolus vulgaris supports coevolution in centers of host diversification. Proc. Natl. Acad. Sci. USA 101:13548-13553.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 13548-13553
    • Aguilar, O.M.1    Riva, O.2    Peltzer, E.3
  • 2
    • 0037614638 scopus 로고    scopus 로고
    • Rapid identification of Escherichia coli pathotypes by virulence gene detection with DNA microarrays
    • Bekal, S., R. Brousseau, L. Masson, G. Prefontaine, J. Fairbrother, and J. Harel. 2003. Rapid identification of Escherichia coli pathotypes by virulence gene detection with DNA microarrays. J. Clin. Microbiol. 41:2113-2125.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 2113-2125
    • Bekal, S.1    Brousseau, R.2    Masson, L.3    Prefontaine, G.4    Fairbrother, J.5    Harel, J.6
  • 4
    • 2942527326 scopus 로고    scopus 로고
    • Oligonucleotide microarrays in microbial diagnostics
    • Bodrossy, L., and A. Sessitsch. 2004. Oligonucleotide microarrays in microbial diagnostics. Curr. Opin. Microbiol. 7:245-254.
    • (2004) Curr. Opin. Microbiol. , vol.7 , pp. 245-254
    • Bodrossy, L.1    Sessitsch, A.2
  • 5
    • 0034047378 scopus 로고    scopus 로고
    • Identification of Sinorhizobium meliloti genes regulated during symbiosis
    • Cabanes, D., P. Boistard, and J. Batut. 2000. Identification of Sinorhizobium meliloti genes regulated during symbiosis. J. Bacteriol. 182:3632-3637.
    • (2000) J. Bacteriol. , vol.182 , pp. 3632-3637
    • Cabanes, D.1    Boistard, P.2    Batut, J.3
  • 6
    • 0037224655 scopus 로고    scopus 로고
    • Genomic comparison of Salmonella enterica serovars and Salmonella bongori by use of an S. enterica serovar Typhimurium DNA microarray
    • Chan, K., S. Baker, C. C. Kim, C. S. Detweiler, G. Dougan, and S. Falkow. 2003. Genomic comparison of Salmonella enterica serovars and Salmonella bongori by use of an S. enterica serovar Typhimurium DNA microarray. J. Bacteriol. 185:553-563.
    • (2003) J. Bacteriol. , vol.185 , pp. 553-563
    • Chan, K.1    Baker, S.2    Kim, C.C.3    Detweiler, C.S.4    Dougan, G.5    Falkow, S.6
  • 7
    • 0034801924 scopus 로고    scopus 로고
    • Ralstonia taiwanensis sp. nov., isolated from root nodules of Mimosa species and sputum of a cystic fibrosis patient
    • Chen, W. M., S. Laevens, T. M. Lee, T. Coenye, P. De Vos, M. Mergeay, and P. Vandamme. 2001. Ralstonia taiwanensis sp. nov., isolated from root nodules of Mimosa species and sputum of a cystic fibrosis patient. Int. J. Syst. Evol. Microbiol. 51:1729-1735.
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 1729-1735
    • Chen, W.M.1    Laevens, S.2    Lee, T.M.3    Coenye, T.4    De Vos, P.5    Mergeay, M.6    Vandamme, P.7
  • 8
  • 9
    • 0027215943 scopus 로고
    • A simple and rapid method for the preparation of gram-negative bacterial genomic DNA
    • Chen, W. P., and T. T. Kuo. 1993. A simple and rapid method for the preparation of gram-negative bacterial genomic DNA. Nucleic Acids Res. 21:2260.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 2260
    • Chen, W.P.1    Kuo, T.T.2
  • 10
    • 0035433897 scopus 로고    scopus 로고
    • Bacterial species determination from DNA-DNA hybridization by using genome fragments and DNA microarrays
    • Cho, J. C., and J. M. Tiedje. 2001. Bacterial species determination from DNA-DNA hybridization by using genome fragments and DNA microarrays. Appl. Environ. Microbiol. 67:3677-3682.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 3677-3682
    • Cho, J.C.1    Tiedje, J.M.2
  • 11
    • 0034799370 scopus 로고    scopus 로고
    • Whole genome plasticity in pathogenic bacteria
    • Dobrindt, U., and J. Hacker. 2001. Whole genome plasticity in pathogenic bacteria. Curr. Opin. Microbiol. 4:550-557.
    • (2001) Curr. Opin. Microbiol. , vol.4 , pp. 550-557
    • Dobrindt, U.1    Hacker, J.2
  • 13
    • 1642321120 scopus 로고    scopus 로고
    • Fingerprinting diazotroph communities in the Chesapeake Bay by using a DNA macroarray
    • Jenkins, B. D., G. F. Steward, S. M. Short, B. B. Ward, and J. P. Zehr. 2004. Fingerprinting diazotroph communities in the Chesapeake Bay by using a DNA macroarray. Appl. Environ. Microbiol. 70:1767-1776.
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 1767-1776
    • Jenkins, B.D.1    Steward, G.F.2    Short, S.M.3    Ward, B.B.4    Zehr, J.P.5
  • 16
    • 0034659898 scopus 로고    scopus 로고
    • Genomics, gene expression and DNA arrays
    • Lockhart, D. J., and E. A. Winzeler. 2000. Genomics, gene expression and DNA arrays. Nature 405:827-836.
    • (2000) Nature , vol.405 , pp. 827-836
    • Lockhart, D.J.1    Winzeler, E.A.2
  • 18
  • 19
    • 2942617054 scopus 로고    scopus 로고
    • Performance of phaseolus bean rhizobia in soils from the major production sites in the Nile Delta
    • Moawad, H., W. M. Abd El-Rahim, and D. Abd El-Haleem. 2004. Performance of phaseolus bean rhizobia in soils from the major production sites in the Nile Delta. C. R. Biol. 327:445-453.
    • (2004) C. R. Biol. , vol.327 , pp. 445-453
    • Moawad, H.1    Abd El-Rahim, W.M.2    Abd El-Haleem, D.3
  • 20
    • 10744219797 scopus 로고    scopus 로고
    • Phylogenetic analyses of symbiotic nodulation genes support vertical and lateral gene co-transfer within the Bradyrhizobium genus
    • Moulin, L., G. Bena, C. Boivin-Masson, and T. Stepkowski. 2004. Phylogenetic analyses of symbiotic nodulation genes support vertical and lateral gene co-transfer within the Bradyrhizobium genus. Mol. Phylogenet. Evol. 30: 720-732.
    • (2004) Mol. Phylogenet. Evol. , vol.30 , pp. 720-732
    • Moulin, L.1    Bena, G.2    Boivin-Masson, C.3    Stepkowski, T.4
  • 21
    • 0035927646 scopus 로고    scopus 로고
    • Nodulation of legumes by members of the beta-subclass of Proteobacteria
    • Moulin, L., A. Munive, B. Dreyfus, and C. Boivin-Masson. 2001. Nodulation of legumes by members of the beta-subclass of Proteobacteria. Nature 411: 948-950.
    • (2001) Nature , vol.411 , pp. 948-950
    • Moulin, L.1    Munive, A.2    Dreyfus, B.3    Boivin-Masson, C.4
  • 22
    • 0035843908 scopus 로고    scopus 로고
    • Genes lost and genes found: Evolution of bacterial pathogenesis and symbiosis
    • Ochman, H., and N. A. Moran. 2001. Genes lost and genes found: evolution of bacterial pathogenesis and symbiosis. Science 292:1096-1099.
    • (2001) Science , vol.292 , pp. 1096-1099
    • Ochman, H.1    Moran, N.A.2
  • 23
    • 0142259152 scopus 로고    scopus 로고
    • Plant biology: Locks, keys and symbioses
    • Parniske, M., and J. A. Downie. 2003. Plant biology: locks, keys and symbioses. Nature 425:569-570.
    • (2003) Nature , vol.425 , pp. 569-570
    • Parniske, M.1    Downie, J.A.2
  • 26
    • 0043122986 scopus 로고    scopus 로고
    • CODEHOP (COnsensus-DEgenerate Hybrid Oligonucleotide Primer) PCR primer design
    • Rose, T. M., J. G. Henikoff, and S. Henikoff. 2003. CODEHOP (COnsensus-DEgenerate Hybrid Oligonucleotide Primer) PCR primer design. Nucleic Acids Res. 31:3763-3766.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3763-3766
    • Rose, T.M.1    Henikoff, J.G.2    Henikoff, S.3
  • 27
    • 0141590419 scopus 로고    scopus 로고
    • Changing concepts in the systematics of bacterial nitrogen-fixing legume symbionts
    • Sawada, H., L. D. Kuykendall, and J. M. Young. 2003. Changing concepts in the systematics of bacterial nitrogen-fixing legume symbionts. J Gen. Appl. Microbiol. 49:155-179.
    • (2003) J Gen. Appl. Microbiol. , vol.49 , pp. 155-179
    • Sawada, H.1    Kuykendall, L.D.2    Young, J.M.3
  • 30
    • 0037316061 scopus 로고    scopus 로고
    • Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment
    • Taroncher-Oldenburg, G., E. M. Griner, C. A. Francis, and B. B. Ward. 2003. Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment. Appl. Environ. Microbiol. 69:1159-1171.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 1159-1171
    • Taroncher-Oldenburg, G.1    Griner, E.M.2    Francis, C.A.3    Ward, B.B.4
  • 31
    • 0035823170 scopus 로고    scopus 로고
    • Advances in the analysis of DNA sequence variations using Oligonucleotide microchip technology
    • Tillib, S. V., and A. D. Mirzabekov. 2001. Advances in the analysis of DNA sequence variations using Oligonucleotide microchip technology. Curr. Opin. Biotechnol. 12:53-58.
    • (2001) Curr. Opin. Biotechnol. , vol.12 , pp. 53-58
    • Tillib, S.V.1    Mirzabekov, A.D.2
  • 32
    • 0037356816 scopus 로고    scopus 로고
    • Internal telomeric repeats and 'TCP domain' protein-binding sites co-operate to regulate gene expression in Arabidopsis thaliana cycling cells
    • Tremousaygue, D., L. Garnier, C. Bardet, P. Dabos, C. Herve, and B. Lescure. 2003. Internal telomeric repeats and 'TCP domain' protein-binding sites co-operate to regulate gene expression in Arabidopsis thaliana cycling cells. Plant J. 33:957-966.
    • (2003) Plant J. , vol.33 , pp. 957-966
    • Tremousaygue, D.1    Garnier, L.2    Bardet, C.3    Dabos, P.4    Herve, C.5    Lescure, B.6
  • 33
    • 0028891109 scopus 로고
    • Nonpigmented and bacteriochlorophyll-containing bradyrhizobia isolated from Aeschynomene indica
    • Van Berkhum, P., R. E. Tully, and D. L. Keister. 1995. Nonpigmented and bacteriochlorophyll-containing bradyrhizobia isolated from Aeschynomene indica. Appl. Environ. Microbiol. 61:623-629.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 623-629
    • Van Berkhum, P.1    Tully, R.E.2    Keister, D.L.3
  • 39
    • 0037772204 scopus 로고    scopus 로고
    • Microarrays for bacterial detection and microbial community analysis
    • Zhou, J. 2003. Microarrays for bacterial detection and microbial community analysis. Curr. Opin. Microbiol. 6:288-294.
    • (2003) Curr. Opin. Microbiol. , vol.6 , pp. 288-294
    • Zhou, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.