-
1
-
-
0034988978
-
Distribution of nitrogen-fixing microorganisms along the Neuse River Estuary, North Carolina
-
Affourtit, J., J. P. Zehr, and H. W. Paerl. 2001. Distribution of nitrogen-fixing microorganisms along the Neuse River Estuary, North Carolina. Microb. Ecol. 41:114-123.
-
(2001)
Microb. Ecol.
, vol.41
, pp. 114-123
-
-
Affourtit, J.1
Zehr, J.P.2
Paerl, H.W.3
-
2
-
-
0038477037
-
A model of biocomplexity and its application to the analysis of some terrestrial and marsh eukaryotic microbial communities with an emphasis on amoeboid protists
-
Anderson, O. R. 2003. A model of biocomplexity and its application to the analysis of some terrestrial and marsh eukaryotic microbial communities with an emphasis on amoeboid protists. J. Eukaryot. Microbiol. 50:86-91.
-
(2003)
J. Eukaryot. Microbiol.
, vol.50
, pp. 86-91
-
-
Anderson, O.R.1
-
3
-
-
0036899896
-
Evolution of microbial genomes: Sequence acquisition and loss
-
Berg, O. G., and C. G. Kurland. 2002. Evolution of microbial genomes: Sequence acquisition and loss. Mol. Biol. Evol. 19:2265-2276.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 2265-2276
-
-
Berg, O.G.1
Kurland, C.G.2
-
4
-
-
0034058020
-
Cyanobacterial blooms in the Baltic Sea: Natural or human-induced?
-
Blanchi, T. S., E. Engelhaupt, P. Westman, T. Andren, C. Rolff, and R. Elmgren. 2000. Cyanobacterial blooms in the Baltic Sea: natural or human-induced? Limnol. Oceanogr. 45:716-726.
-
(2000)
Limnol. Oceanogr.
, vol.45
, pp. 716-726
-
-
Blanchi, T.S.1
Engelhaupt, E.2
Westman, P.3
Andren, T.4
Rolff, C.5
Elmgren, R.6
-
5
-
-
0036222111
-
Compositional changes in free-living bacterial communities along a salinity gradient in two temperate estuaries
-
Bouvier, T. C., and P. A. del Giorgio. 2002. Compositional changes in free-living bacterial communities along a salinity gradient in two temperate estuaries. Limnol. Oceanogr. 47:453-470.
-
(2002)
Limnol. Oceanogr.
, vol.47
, pp. 453-470
-
-
Bouvier, T.C.1
Del Giorgio, P.A.2
-
6
-
-
0036835633
-
Nitrogen fixing phylotypes of Chesapeake Bay and Neuse River Estuary sediments
-
Burns, J. A., J. P. Zehr, and D. G. Capone. 2002. Nitrogen fixing phylotypes of Chesapeake Bay and Neuse River Estuary sediments. Microb. Ecol. 44: 336-343.
-
(2002)
Microb. Ecol.
, vol.44
, pp. 336-343
-
-
Burns, J.A.1
Zehr, J.P.2
Capone, D.G.3
-
7
-
-
0036193078
-
Quantitative detection of microbial genes by using DNA microarrays
-
Cho, J. C., and J. M. Tiedje. 2002. Quantitative detection of microbial genes by using DNA microarrays. Appl. Environ. Microbiol. 68:1425-1430.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 1425-1430
-
-
Cho, J.C.1
Tiedje, J.M.2
-
8
-
-
0032976388
-
Phylogenetic analysis of particle-attached and free-living bacterial communities in the Columbia River, its estuary, and the adjacent coastal ocean
-
Crump, B. C., E. V. Armbrust, and J. A. Baross. 1999. Phylogenetic analysis of particle-attached and free-living bacterial communities in the Columbia River, its estuary, and the adjacent coastal ocean. Appl. Environ. Microbiol. 65:3192-3204.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 3192-3204
-
-
Crump, B.C.1
Armbrust, E.V.2
Baross, J.A.3
-
9
-
-
0036214336
-
Linking the physiologic and phylogenetic successions in free-living bacterial communities along an estuarine salinity gradient
-
del Giorgio, P. A., and T. C. Bouvier. 2002. Linking the physiologic and phylogenetic successions in free-living bacterial communities along an estuarine salinity gradient. Limnol. Oceanogr. 47:471-486.
-
(2002)
Limnol. Oceanogr.
, vol.47
, pp. 471-486
-
-
Del Giorgio, P.A.1
Bouvier, T.C.2
-
10
-
-
0037315779
-
Monitoring gene expression in mixed microbial communities by using DNA microarrays
-
Dennis, P., E. A. Edwards, S. N. Liss, and R. Fulthorpe. 2003. Monitoring gene expression in mixed microbial communities by using DNA microarrays. Appl. Environ. Microbiol. 69:769-778.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 769-778
-
-
Dennis, P.1
Edwards, E.A.2
Liss, S.N.3
Fulthorpe, R.4
-
11
-
-
0033051902
-
Spatial and temporal variation of resource limitation in Chesapeake Bay
-
Fisher, T. R., A. B. Gustafson, K. Sellner, R. Lacouture, L. W. Haas, R. L. Wetzel, R. Magnien, D. Everitt, B. Michaels, and R. Karrh. 1999. Spatial and temporal variation of resource limitation in Chesapeake Bay. Mar. Biol. 133:763-778.
-
(1999)
Mar. Biol.
, vol.133
, pp. 763-778
-
-
Fisher, T.R.1
Gustafson, A.B.2
Sellner, K.3
Lacouture, R.4
Haas, L.W.5
Wetzel, R.L.6
Magnien, R.7
Everitt, D.8
Michaels, B.9
Karrh, R.10
-
12
-
-
0002345006
-
Nutrient limitation of phytoplankton in Chesapeake Bay
-
Fisher, T. R., E. R. Peele, J. W. Ammerman, and L. W. Harding. 1992. Nutrient limitation of phytoplankton in Chesapeake Bay. Mar. Ecol. Prog. Ser. 82:51-63.
-
(1992)
Mar. Ecol. Prog. Ser.
, vol.82
, pp. 51-63
-
-
Fisher, T.R.1
Peele, E.R.2
Ammerman, J.W.3
Harding, L.W.4
-
13
-
-
0025366454
-
Genetic diversity in Sargasso Sea bacterioplankton
-
Giovannoni, S. J., T. B. Britschgi, C. L. Moyer, and K. G. Field. 1990. Genetic diversity in Sargasso Sea bacterioplankton. Nature (London) 344: 60-63.
-
(1990)
Nature (London)
, vol.344
, pp. 60-63
-
-
Giovannoni, S.J.1
Britschgi, T.B.2
Moyer, C.L.3
Field, K.G.4
-
14
-
-
0030984907
-
Oligonucleotide microchips as genosensors for determinative and environmental studies in microbiology
-
Guschin, D. Y., B. K. Mobarry, D. Proudnikov, D. A. Stahl, B. E. Rittmann, and A. D. Mirzabekov. 1997. Oligonucleotide microchips as genosensors for determinative and environmental studies in microbiology. Appl. Environ. Microbiol. 63:2397-2402.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 2397-2402
-
-
Guschin, D.Y.1
Mobarry, B.K.2
Proudnikov, D.3
Stahl, D.A.4
Rittmann, B.E.5
Mirzabekov, A.D.6
-
16
-
-
7744224797
-
Structural basis of biological nitrogen fixation
-
Howard, J. B., and D. C. Rees. 1996. Structural basis of biological nitrogen fixation. Chem. Rev. 96:2965-2982.
-
(1996)
Chem. Rev.
, vol.96
, pp. 2965-2982
-
-
Howard, J.B.1
Rees, D.C.2
-
17
-
-
0035516087
-
Recovery and phylogenetic analysis of nifH sequences from diazotrophic bacteria associated with dead aboveground biomass of Spartina alterniflora
-
Lovell, C. R., M. J. Friez, J. W. Longshore, and C. E. Bagwell. 2001. Recovery and phylogenetic analysis of nifH sequences from diazotrophic bacteria associated with dead aboveground biomass of Spartina alterniflora. Appl. Environ. Microbiol. 67:5308-5314.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 5308-5314
-
-
Lovell, C.R.1
Friez, M.J.2
Longshore, J.W.3
Bagwell, C.E.4
-
18
-
-
0036795787
-
Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment
-
Loy, A., A. Lehner, N. Lee, J. Adamczyk, H. Meier, J. Ernst, K. H. Schleifer, and M. Wagner. 2002. Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment. Appl. Environ. Microbiol. 68:5064-5081.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 5064-5081
-
-
Loy, A.1
Lehner, A.2
Lee, N.3
Adamczyk, J.4
Meier, H.5
Ernst, J.6
Schleifer, K.H.7
Wagner, M.8
-
19
-
-
0035210527
-
Microbiological, molecular biological and stable isotopic evidence for nitrogen fixation in the open waters of Lake Michigan
-
MacGregor, B. J., B. Van Mooy, B. J. Baker, M. Mellon, P. H. Moisander, H. W. Paerl, J. Zehr, D. Hollander, and D. A. Stahl. 2001. Microbiological, molecular biological and stable isotopic evidence for nitrogen fixation in the open waters of Lake Michigan. Environ. Microbiol. 3:205-219.
-
(2001)
Environ. Microbiol.
, vol.3
, pp. 205-219
-
-
MacGregor, B.J.1
Van Mooy, B.2
Baker, B.J.3
Mellon, M.4
Moisander, P.H.5
Paerl, H.W.6
Zehr, J.7
Hollander, D.8
Stahl, D.A.9
-
20
-
-
0029669769
-
Scales of nutrient-limited phytoplankton productivity in Chesapeake Bay
-
Malone, T. C., D. J. Conley, T. R. Fisher, P. M. Glibert, L. W. Harding, and K. G. Sellner. 1996. Scales of nutrient-limited phytoplankton productivity in Chesapeake Bay. Estuaries 19:371-385.
-
(1996)
Estuaries
, vol.19
, pp. 371-385
-
-
Malone, T.C.1
Conley, D.J.2
Fisher, T.R.3
Glibert, P.M.4
Harding, L.W.5
Sellner, K.G.6
-
21
-
-
0031838852
-
Contrasts between marine and freshwater bacterial community composition: Analyses of communities in Lake George, N. Y. and six other Adirondack lakes
-
Methe, B. A., W. D. Hiorns, and J. P. Zehr. 1998. Contrasts between marine and freshwater bacterial community composition: analyses of communities in Lake George, N. Y. and six other Adirondack lakes. Limnol. Oceanogr. 43:368-374.
-
(1998)
Limnol. Oceanogr.
, vol.43
, pp. 368-374
-
-
Methe, B.A.1
Hiorns, W.D.2
Zehr, J.P.3
-
22
-
-
0033831328
-
Growth, primary productivity, and nitrogen fixation potential of Nodularia spp. (Cyanophyceae) in water from a subtropical estuary in the United States
-
Moisander, P. H., and H. W. Paerl. 2000. Growth, primary productivity, and nitrogen fixation potential of Nodularia spp. (Cyanophyceae) in water from a subtropical estuary in the United States. J. Phycol. 36:645-658.
-
(2000)
J. Phycol.
, vol.36
, pp. 645-658
-
-
Moisander, P.H.1
Paerl, H.W.2
-
23
-
-
0030036446
-
Phylogenetic compositions of bacterioplankton from two California estuaries compared by denaturing gradient gel electrophoresis of 16S rDNA fragments
-
Murray, A. E., J. T. Hollibaugh, and C. Orrego. 1996. Phylogenetic compositions of bacterioplankton from two California estuaries compared by denaturing gradient gel electrophoresis of 16S rDNA fragments. Appl. Environ. Microbiol. 62:2676-2680.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 2676-2680
-
-
Murray, A.E.1
Hollibaugh, J.T.2
Orrego, C.3
-
24
-
-
0030982247
-
A molecular view of microbial diversity and the biosphere
-
Pace, N. R. 1997. A molecular view of microbial diversity and the biosphere. Science 276:734-740.
-
(1997)
Science
, vol.276
, pp. 734-740
-
-
Pace, N.R.1
-
25
-
-
0037335692
-
Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes
-
Peplies, J., F. O. Glockner, and R. Amann. 2003. Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes. Appl. Environ. Microbiol. 69:1397-1407.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 1397-1407
-
-
Peplies, J.1
Glockner, F.O.2
Amann, R.3
-
26
-
-
0035171848
-
The role of nutrient loading and eutrophication in estuarine ecology
-
Pinckney, J. L, H. W. Paerl, P. Tester, and T. L. Richardson. 2001. The role of nutrient loading and eutrophication in estuarine ecology. Environ. Health Perspect. 109:699-706.
-
(2001)
Environ. Health Perspect.
, vol.109
, pp. 699-706
-
-
Pinckney, J.L.1
Paerl, H.W.2
Tester, P.3
Richardson, T.L.4
-
27
-
-
13944281842
-
The spatial and seasonal distribution of two diazotrophic bacteria in the Chesapeake Bay
-
in press
-
Short, S. M., B. D. Jenkins, and J. P. Zehr. The spatial and seasonal distribution of two diazotrophic bacteria in the Chesapeake Bay. Appl. Environ. Microbiol., in press.
-
Appl. Environ. Microbiol.
-
-
Short, S.M.1
Jenkins, B.D.2
Zehr, J.P.3
-
28
-
-
0035007459
-
Diazotrophy in modern marine Bahamian stromatolites
-
Steppe, T. F., J. L. Pinckney, J. Dyble, and H. W. Paerl. 2001. Diazotrophy in modern marine Bahamian stromatolites. Microb. Ecol. 41:36-44.
-
(2001)
Microb. Ecol.
, vol.41
, pp. 36-44
-
-
Steppe, T.F.1
Pinckney, J.L.2
Dyble, J.3
Paerl, H.W.4
-
30
-
-
1642546612
-
Vertical distribution of nitrogen-fixing phylotypes in a meromictic, hypersaline lake
-
in press
-
Steward, G. F., J. P. Zehr, R. P. Jellison, J. P. Montoya, and J. T. Hollibaugh. Vertical distribution of nitrogen-fixing phylotypes in a meromictic, hypersaline lake. Microb. Ecol., in press.
-
Microb. Ecol.
-
-
Steward, G.F.1
Zehr, J.P.2
Jellison, R.P.3
Montoya, J.P.4
Hollibaugh, J.T.5
-
31
-
-
0037278290
-
Characterization of microbial communities from coastal waters using microarrays
-
Stine, O. C., A. Carnahan, R. Singh, J. Powell, J. P. Furuno, A. Dorsey, E. Silbergeld, H. N. Williams, and J. G. Morris. 2003. Characterization of microbial communities from coastal waters using microarrays. Environ. Monit. Assess. 81:327-336.
-
(2003)
Environ. Monit. Assess.
, vol.81
, pp. 327-336
-
-
Stine, O.C.1
Carnahan, A.2
Singh, R.3
Powell, J.4
Furuno, J.P.5
Dorsey, A.6
Silbergeld, E.7
Williams, H.N.8
Morris, J.G.9
-
32
-
-
0031790538
-
Kinetic bias in estimates of coastal picoplankton community structure obtained by measurements of small-subunit rRNA gene PCR amplicon length heterogeneity
-
Suzuki, M., M. S. Rappe, and S. J. Giovannoni. 1998. Kinetic bias in estimates of coastal picoplankton community structure obtained by measurements of small-subunit rRNA gene PCR amplicon length heterogeneity. Appl. Environ. Microbiol. 64:4522-4529.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 4522-4529
-
-
Suzuki, M.1
Rappe, M.S.2
Giovannoni, S.J.3
-
33
-
-
0037316061
-
Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment
-
Taroncher-Oldenburg, G., E. M. Griner, C. A. Francis, and B. B. Ward. 2003. Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment. Appl. Environ. Microbiol. 69:1159-1171.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 1159-1171
-
-
Taroncher-Oldenburg, G.1
Griner, E.M.2
Francis, C.A.3
Ward, B.B.4
-
34
-
-
0036245011
-
High-density microarray of small-subunit ribosomal DNA probes
-
Wilson, K. H., W. J. Wilson, J. L. Radosevich, T. Z. DeSantis, V. S. Viswanathan, T. A. Kuczmarski, and G. L. Andersen. 2002. High-density microarray of small-subunit ribosomal DNA probes. Appl. Environ. Microbiol. 68:2535-2541.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 2535-2541
-
-
Wilson, K.H.1
Wilson, W.J.2
Radosevich, J.L.3
DeSantis, T.Z.4
Viswanathan, V.S.5
Kuczmarski, T.A.6
Andersen, G.L.7
-
35
-
-
0035656126
-
Development and evaluation of functional gene arrays for detection of selected genes in the environment
-
Wu, L. Y., D. K. Thompson, G. S. Li, R. A. Hurt, J. M. Tiedje, and J. Z. Zhou. 2001. Development and evaluation of functional gene arrays for detection of selected genes in the environment. Appl. Environ. Microbiol. 67:5780-5790.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 5780-5790
-
-
Wu, L.Y.1
Thompson, D.K.2
Li, G.S.3
Hurt, R.A.4
Tiedje, J.M.5
Zhou, J.Z.6
-
36
-
-
0033916012
-
Expression of nifH genes in natural microbial assemblages in Lake George, N.Y., detected with reverse transcription-PCR
-
Zani, S., M. T. Mellon, J. L. Collier, and J. P. Zehr. 2000. Expression of nifH genes in natural microbial assemblages in Lake George, N.Y., detected with reverse transcription-PCR. Appl. Environ. Microbiol. 66:3119-3124.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 3119-3124
-
-
Zani, S.1
Mellon, M.T.2
Collier, J.L.3
Zehr, J.P.4
-
37
-
-
0038234799
-
Nitrogenase gene diversity and microbial community structure: A cross-system comparison
-
Zehr, J. P., B. D. Jenkins, S. M. Short, and G. F. Steward. 2003. Nitrogenase gene diversity and microbial community structure: a cross-system comparison. Environ. Microbiol. 5:539-554.
-
(2003)
Environ. Microbiol.
, vol.5
, pp. 539-554
-
-
Zehr, J.P.1
Jenkins, B.D.2
Short, S.M.3
Steward, G.F.4
-
38
-
-
0024746373
-
Use of degenerate oligonucleotides for amplification of the nifH gene from the marine cyanobacterium Trichodesmium spp.
-
Zehr, J. P., and L. A. McReynolds. 1989. Use of degenerate oligonucleotides for amplification of the nifH gene from the marine cyanobacterium Trichodesmium spp. Appl. Environ. Microbiol. 55:2522-2526.
-
(1989)
Appl. Environ. Microbiol.
, vol.55
, pp. 2522-2526
-
-
Zehr, J.P.1
McReynolds, L.A.2
-
39
-
-
0035833470
-
Unicellular cyanobacteria fix N-2 in the subtropical North Pacific Ocean
-
Zehr, J. P., J. B. Waterbury, P. J. Turner, J. P. Montoya, E. Omoregie, G. F. Steward, A. Hansen, and D. M. Karl. 2001. Unicellular cyanobacteria fix N-2 in the subtropical North Pacific Ocean. Nature 412:635-638.
-
(2001)
Nature
, vol.412
, pp. 635-638
-
-
Zehr, J.P.1
Waterbury, J.B.2
Turner, P.J.3
Montoya, J.P.4
Omoregie, E.5
Steward, G.F.6
Hansen, A.7
Karl, D.M.8
-
40
-
-
0032432257
-
Near-identical 16S rRNA sequences recovered from lakes in North America and Europe indicate the existence of clades of freshwater bacteria with global distribution
-
Zwart, G., W. D. Hiorns, B. A. Methe', M. P. Agterveld, R. Huismans, S. C. Nold, J. P. Zehr, and H. J. Laanbroek. 1998. Near-identical 16S rRNA sequences recovered from lakes in North America and Europe indicate the existence of clades of freshwater bacteria with global distribution. Syst. Appl. Microbiol. 21:546-556.
-
(1998)
Syst. Appl. Microbiol.
, vol.21
, pp. 546-556
-
-
Zwart, G.1
Hiorns, W.D.2
Methe', B.A.3
Agterveld, M.P.4
Huismans, R.5
Nold, S.C.6
Zehr, J.P.7
Laanbroek, H.J.8
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