-
1
-
-
0037008011
-
Multiple conformational changes in enzyme catalysis
-
Hammes, G. G. (2002) Multiple conformational changes in enzyme catalysis, Biochemistry 41, 8221-8228.
-
(2002)
Biochemistry
, vol.41
, pp. 8221-8228
-
-
Hammes, G.G.1
-
2
-
-
0036088602
-
The linkage between protein folding and functional cooperativity: Two sides of the same coin?
-
Luque, I., Leavitt, S. A., and Freire, E. (2002) The linkage between protein folding and functional cooperativity: two sides of the same coin? Annu. Rev. Biophys. Biomol. Struct. 31, 235-256.
-
(2002)
Annu. Rev. Biophys. Biomol. Struct.
, vol.31
, pp. 235-256
-
-
Luque, I.1
Leavitt, S.A.2
Freire, E.3
-
3
-
-
0035937443
-
Two state allosteric behavior in single domain signaling protein
-
Volkman, B. F., Lipson, D., Wemmer, D. E., and Kern, D. (2001) Two state allosteric behavior in single domain signaling protein, Science 291, 2449-2433.
-
(2001)
Science
, vol.291
, pp. 2449-12433
-
-
Volkman, B.F.1
Lipson, D.2
Wemmer, D.E.3
Kern, D.4
-
4
-
-
0034641670
-
Tryptophan fluorescence reveals the conformational state of a dynamic loop in recombinant porcine fructose-1,6-bisphosphatase
-
Nelson, S. W., Iancu, C. V., Choe, J. Y., Honzatko, R. B., and Fromm, H. J. (2000) Tryptophan fluorescence reveals the conformational state of a dynamic loop in recombinant porcine fructose-1,6-bisphosphatase, Biochemistry 39, 11100-11106.
-
(2000)
Biochemistry
, vol.39
, pp. 11100-11106
-
-
Nelson, S.W.1
Iancu, C.V.2
Choe, J.Y.3
Honzatko, R.B.4
Fromm, H.J.5
-
5
-
-
0346220393
-
The role of dynamics in allosteric regulation
-
Kern, D., and Zuiderberg, E. R. P. (2003) The role of dynamics in allosteric regulation, Curr. Opin. Struct. Biol. 13, 748-757.
-
(2003)
Curr. Opin. Struct. Biol.
, vol.13
, pp. 748-757
-
-
Kern, D.1
Zuiderberg, E.R.P.2
-
6
-
-
0033534145
-
Determination of protein secondary structure and solvent accessibility using site-directed fluorescence labeling. Studies of T4 lysozyme using the fluorescent probe monobromobimane
-
Mansoor, S. E., McHaourab, H. S., and Farrens, D. L. (1999) Determination of protein secondary structure and solvent accessibility using site-directed fluorescence labeling. Studies of T4 lysozyme using the fluorescent probe monobromobimane, Biochemistry 38, 16383-16393.
-
(1999)
Biochemistry
, vol.38
, pp. 16383-16393
-
-
Mansoor, S.E.1
McHaourab, H.S.2
Farrens, D.L.3
-
7
-
-
0037176909
-
Mapping proximity within proteins using fluorescence spectroscopy. A study of T4 lysozyme showing that tryptophan residues quench bimane fluorescence
-
Mansoor, S. E., McHaourab, H. S., and Farrens, D. L. (2002) Mapping proximity within proteins using fluorescence spectroscopy. A study of T4 lysozyme showing that tryptophan residues quench bimane fluorescence, Biochemistry 41, 2475-2484.
-
(2002)
Biochemistry
, vol.41
, pp. 2475-2484
-
-
Mansoor, S.E.1
McHaourab, H.S.2
Farrens, D.L.3
-
8
-
-
0031765520
-
Recent advances in site-directed spin labeling of proteins
-
Hubbell, W. L., Gross, A., Langen, R., and Lietzow, M. A. (1998) Recent advances in site-directed spin labeling of proteins, Curr. Opin. Struct. Biol. 8, 649-656.
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 649-656
-
-
Hubbell, W.L.1
Gross, A.2
Langen, R.3
Lietzow, M.A.4
-
10
-
-
0021762288
-
Purification, molecular and kinetic properties of glucosamine 6-phosphate isomerase (deaminase) from Escherichia coli
-
Calcagno, M. L., Campos, P. J., Mulliert, G., and Suástegui, J. (1984) Purification, molecular and kinetic properties of glucosamine 6-phosphate isomerase (deaminase) from Escherichia coli, Biochim. Biophys. Acta 787, 165-173.
-
(1984)
Biochim. Biophys. Acta
, vol.787
, pp. 165-173
-
-
Calcagno, M.L.1
Campos, P.J.2
Mulliert, G.3
Suástegui, J.4
-
11
-
-
0029046064
-
Asymmetric allosteric activation of Escherichia coli glucosamine-6- phosphate deaminase produced by replacements of Tyr 121
-
Altamirano, M. M., Plumbridge, J. A., Horjales, E., and Calcagno, M. L. (1995) Asymmetric allosteric activation of Escherichia coli glucosamine-6- phosphate deaminase produced by replacements of Tyr 121, Biochemistry 34, 6074-6082.
-
(1995)
Biochemistry
, vol.34
, pp. 6074-6082
-
-
Altamirano, M.M.1
Plumbridge, J.A.2
Horjales, E.3
Calcagno, M.L.4
-
12
-
-
0032568581
-
Tyr254 hydroxyl group acts as a two-way switch mechanism in the coupling of heterotropic homotropic effects in Escherichia coli glucosamine-6-phosphate deaminase
-
Montero-Morán, G. M., Horjales, E., Calcagno, M. L., and Altamirano, M. M. (1998) Tyr254 hydroxyl group acts as a two-way switch mechanism in the coupling of heterotropic homotropic effects in Escherichia coli glucosamine-6-phosphate deaminase, Biochemistry 37, 7844-7849.
-
(1998)
Biochemistry
, vol.37
, pp. 7844-7849
-
-
Montero-Morán, G.M.1
Horjales, E.2
Calcagno, M.L.3
Altamirano, M.M.4
-
13
-
-
0029646095
-
Structure and catalytic mechanism of glucosamine 6-phosphate deaminase of Escherichia coli at 2.1 Å resolution
-
Oliva, G., Fontes, M. R. M., Garrat, R. C., Altamirano, M. M., Calcagno, M. L., and Horjales, E. (1995) Structure and catalytic mechanism of glucosamine 6-phosphate deaminase of Escherichia coli at 2.1 Å resolution, Structure 3, 1323-1332.
-
(1995)
Structure
, vol.3
, pp. 1323-1332
-
-
Oliva, G.1
Fontes, M.R.M.2
Garrat, R.C.3
Altamirano, M.M.4
Calcagno, M.L.5
Horjales, E.6
-
14
-
-
0033135157
-
The allosteric transition of glucosamine 6-phosphate deaminase: The structure of T-state at 2.3 Å resolution
-
Horjales, E., Altamirano, M. M., Calcagno, M. L., Garrat, R. C., and Oliva, G. (1999) The allosteric transition of glucosamine 6-phosphate deaminase: the structure of T-state at 2.3 Å resolution, Structure 7, 527-537.
-
(1999)
Structure
, vol.7
, pp. 527-537
-
-
Horjales, E.1
Altamirano, M.M.2
Calcagno, M.L.3
Garrat, R.C.4
Oliva, G.5
-
15
-
-
0037069408
-
Isolation of a single activating allosteric interaction in phosphofructokinase from Escherichia coli
-
Fenton, A. W., and Reinhart, G. D. (2002) Isolation of a single activating allosteric interaction in phosphofructokinase from Escherichia coli, Biochemistry 41, 13410-13416.
-
(2002)
Biochemistry
, vol.41
, pp. 13410-13416
-
-
Fenton, A.W.1
Reinhart, G.D.2
-
16
-
-
0347724018
-
Disentangling the web of allosteric communication in a homotetramer: Heterotropic inhibition of phosphofructokinase from Bacillus stearothermophilus
-
Ortigosa, A. D., Kimmel, J. L., and Reinhart, G. D. (2004) Disentangling the web of allosteric communication in a homotetramer: heterotropic inhibition of phosphofructokinase from Bacillus stearothermophilus, Biochemistry 43, 577-586.
-
(2004)
Biochemistry
, vol.43
, pp. 577-586
-
-
Ortigosa, A.D.1
Kimmel, J.L.2
Reinhart, G.D.3
-
17
-
-
0026030632
-
Secondary structure of Escherichia coli glucosamine-6-phosphate deaminase from an amino acid sequence and circular dichroism spectroscopy
-
Altamirano, M. M., Plumbridge, J. A., Hernandez-Arana, A., and Calcagno, M. (1991) Secondary structure of Escherichia coli glucosamine-6-phosphate deaminase from an amino acid sequence and circular dichroism spectroscopy, Biochim. Biophys. Acta 1076, 266-277.
-
(1991)
Biochim. Biophys. Acta
, vol.1076
, pp. 266-277
-
-
Altamirano, M.M.1
Plumbridge, J.A.2
Hernandez-Arana, A.3
Calcagno, M.4
-
18
-
-
0022186670
-
Measurement of protein using bicinchoninic acid
-
Smith, P. K., Krohn, R. I., Hermanson, G. T., Mallia, A. K., Gartner, F. H., Provenzano, M. D., Fujimoto, E. K., Goeke, N. M., Olson, B. J., and Klenk, D. C. (1985) Measurement of protein using bicinchoninic acid, Anal. Biochem. 150, 76-85.
-
(1985)
Anal. Biochem.
, vol.150
, pp. 76-85
-
-
Smith, P.K.1
Krohn, R.I.2
Hermanson, G.T.3
Mallia, A.K.4
Gartner, F.H.5
Provenzano, M.D.6
Fujimoto, E.K.7
Goeke, N.M.8
Olson, B.J.9
Klenk, D.C.10
-
19
-
-
0023084127
-
Thiol labeling with bromobimanes
-
William, B. J., Owen, W. G., Ed. Academic Press, New York
-
Kosower, N. S., and Kosower, E. M. (1987) Thiol labeling with bromobimanes, in Methods in Enzymology (William, B. J., Owen, W. G., Ed.) pp 76-84, Academic Press, New York.
-
(1987)
Methods in Enzymology
, pp. 76-84
-
-
Kosower, N.S.1
Kosower, E.M.2
-
20
-
-
78651189765
-
On the nature of allosteric transitions: A plausible model
-
Monod, J., Wyman, J., and Changeux, J. P. (1965) On the nature of allosteric transitions: a plausible model, J. Mol. Biol. 12, 88-118.
-
(1965)
J. Mol. Biol.
, vol.12
, pp. 88-118
-
-
Monod, J.1
Wyman, J.2
Changeux, J.P.3
-
21
-
-
49749177569
-
A colorimetric method for determining low concentrations of mercaptans
-
Ellman, G. L. (1958) A colorimetric method for determining low concentrations of mercaptans, Arch. Biochem. Biophys. 74, 443-450.
-
(1958)
Arch. Biochem. Biophys.
, vol.74
, pp. 443-450
-
-
Ellman, G.L.1
-
22
-
-
0013850513
-
Fluorescence quantum yield measurements: Vitamin B6 compounds
-
Chen, R. (1965) Fluorescence quantum yield measurements: vitamin B6 compounds, Science 150, 1593-1595.
-
(1965)
Science
, vol.150
, pp. 1593-1595
-
-
Chen, R.1
-
24
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimization, and dynamics calculations
-
Brooks, B. R., Bruccoleri, R. E., Olafson, B. D., States, D. J., Swaminathan, S., and Karplus, M. (1983) CHARMM: a program for macromolecular energy, minimization, and dynamics calculations, J. Comput. Chem. 4, 187-217.
-
(1983)
J. Comput. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
25
-
-
27944473518
-
-
'NACCESS', computer program, Department of Biochemistry and Molecular Biology, University College London, London, U.K.
-
Hubbard, S. J., and Thornton, J. M. (1993) 'NACCESS', computer program, Department of Biochemistry and Molecular Biology, University College London, London, U.K.
-
(1993)
-
-
Hubbard, S.J.1
Thornton, J.M.2
-
26
-
-
0026590508
-
Identification of two cysteine residues forming a pair of vicinal thiols in glucosamine-6-phosphate deaminase from Escherichia coli and a study of their functional role by site-directed mutagenesis
-
Altamirano, M. M., Plumbridge, J. A., and Calcagno, M. L. (1992) Identification of two cysteine residues forming a pair of vicinal thiols in glucosamine-6-phosphate deaminase from Escherichia coli and a study of their functional role by site-directed mutagenesis, Biochemistry 31, 1153-1158.
-
(1992)
Biochemistry
, vol.31
, pp. 1153-1158
-
-
Altamirano, M.M.1
Plumbridge, J.A.2
Calcagno, M.L.3
-
27
-
-
0008527363
-
Bimanes 22. Flexible fluorescent molecules. Solvent effects on the photophysical properties of synbimanes (1,5-diazabicyclo[3.3.0]octa-3,6-diene-2, 8-diones)
-
Kosower, E. M., Giniger, R., Radkowsky, A., Hebel, D., and Shusterman, A. (1986) Bimanes 22. Flexible fluorescent molecules. Solvent effects on the photophysical properties of synbimanes (1,5-diazabicyclo[3.3.0]octa-3,6-diene-2, 8-diones), J. Phys. Chem. 90, 5552-5557.
-
(1986)
J. Phys. Chem.
, vol.90
, pp. 5552-5557
-
-
Kosower, E.M.1
Giniger, R.2
Radkowsky, A.3
Hebel, D.4
Shusterman, A.5
-
28
-
-
13444267354
-
Evidence for two different mechanisms triggering the change in quaternary structure of the allosteric enzyme, glucosamine-6-phosphate deaminase
-
Bustos-Jaimes, I., Ramírez-Costa, M., De-Anda-Aguilar, L., Hinojosa-Ocaña, P., and Calcagno, M. L. (2005) Evidence for two different mechanisms triggering the change in quaternary structure of the allosteric enzyme, glucosamine-6-phosphate deaminase, Biochemistry 44, 1127-1135.
-
(2005)
Biochemistry
, vol.44
, pp. 1127-1135
-
-
Bustos-Jaimes, I.1
Ramírez-Costa, M.2
De-Anda-Aguilar, L.3
Hinojosa-Ocaña, P.4
Calcagno, M.L.5
-
29
-
-
5144223974
-
New insights into allosteric mechanisms from trapping unstable protein conformations in silica gels
-
Viappiani, C., Bettati, S., Bruno, S., Ronda, L., Abruzzetti, S., Mozzarelli, A., and Eaton, W. A. (2004) New insights into allosteric mechanisms from trapping unstable protein conformations in silica gels, Proc. Natl. Acad. Sci. U.S.A. 101, 14414-14419.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 14414-14419
-
-
Viappiani, C.1
Bettati, S.2
Bruno, S.3
Ronda, L.4
Abruzzetti, S.5
Mozzarelli, A.6
Eaton, W.A.7
-
30
-
-
4344612865
-
Monitoring the transition from the T to the R state in E. coli aspartate transcarbamylase by X-ray crystallography: Crystal structures of the E50A mutant enzyme in four distinct allosteric states
-
Stieglitz, K., Stec, B., Baker, D. P., and Kantrowitz, E. R. (2004) Monitoring the transition from the T to the R state in E. coli aspartate transcarbamylase by X-ray crystallography: crystal structures of the E50A mutant enzyme in four distinct allosteric states, J. Mol. Biol. 341, 853-868.
-
(2004)
J. Mol. Biol.
, vol.341
, pp. 853-868
-
-
Stieglitz, K.1
Stec, B.2
Baker, D.P.3
Kantrowitz, E.R.4
|