메뉴 건너뛰기




Volumn 16, Issue 2, 2005, Pages 103-116

Isolation and enrichment of abundant microsatellites from a channel catfish (Ictalurus punctatus) brain cDNA library

Author keywords

Brain; Channel catfish; Expressed sequences; Microsatellites

Indexed keywords

ASSEMBLY; BRAIN; DNA;

EID: 27844507077     PISSN: 10495398     EISSN: None     Source Type: Journal    
DOI: 10.1080/10495390500262908     Document Type: Article
Times cited : (17)

References (28)
  • 1
    • 0032954497 scopus 로고    scopus 로고
    • Utilization of gene mapping information in livestock animals
    • Kappes SM. Utilization of gene mapping information in livestock animals. Theriogenol 1999; 51:135-147.
    • (1999) Theriogenol , vol.51 , pp. 135-147
    • Kappes, S.M.1
  • 2
    • 0033374722 scopus 로고    scopus 로고
    • Towards marker assisted selection in livestock
    • Georges M. Towards marker assisted selection in livestock. Reprod Nutri Develop 1999; 39:555-561.
    • (1999) Reprod Nutri Develop , vol.39 , pp. 555-561
    • Georges, M.1
  • 6
    • 0034750926 scopus 로고    scopus 로고
    • Mapping of 93 porcine ESTs preferentially expressed in liver
    • Ponsuksili S, Wimmers K, Yerle M, Schellander K. Mapping of 93 porcine ESTs preferentially expressed in liver. Mamm Genome 2001; 12:869-872.
    • (2001) Mamm Genome , vol.12 , pp. 869-872
    • Ponsuksili, S.1    Wimmers, K.2    Yerle, M.3    Schellander, K.4
  • 8
    • 0032052946 scopus 로고    scopus 로고
    • Developing microsatellite markers from cDNA: A tool for adding expressed sequence tags to the genetic linkage map of the chicken
    • Ruyter-Spira CP, de Koning DJ, van der Poel JJ, Crooijmans RP, Dijkhof RJ, Groenen M.A. Developing microsatellite markers from cDNA: A tool for adding expressed sequence tags to the genetic linkage map of the chicken. Anim Genet 1998; 29:85-90.
    • (1998) Anim Genet , vol.29 , pp. 85-90
    • Ruyter-Spira, C.P.1    De Koning, D.J.2    Van Der Poel, J.J.3    Crooijmans, R.P.4    Dijkhof, R.J.5    Groenen, M.A.6
  • 9
    • 0036221676 scopus 로고    scopus 로고
    • Use of bovine EST data and human genomic sequences to map 100 gene-specific bovine markers
    • Stone RT, Grosse WM, Casas E, Smith TP, Keele JW, Bennett GL. Use of bovine EST data and human genomic sequences to map 100 gene-specific bovine markers. Mamm Genome 2002; 13:211-215.
    • (2002) Mamm Genome , vol.13 , pp. 211-215
    • Stone, R.T.1    Grosse, W.M.2    Casas, E.3    Smith, T.P.4    Keele, J.W.5    Bennett, G.L.6
  • 10
    • 0027178849 scopus 로고
    • Microsatellite repeats in pig (Sus domestica) and chicken (Gallus domesticus) genomes
    • Moran C. Microsatellite repeats in pig (Sus domestica) and chicken (Gallus domesticus) genomes. J Hered 1993; 84:274-280.
    • (1993) J Hered , vol.84 , pp. 274-280
    • Moran, C.1
  • 11
    • 0034123642 scopus 로고    scopus 로고
    • Linkage mapping and comparative analysis of bovine expressed sequence tags (ESTs)
    • Grosse WM, Kappes SM, McGraw RA. Linkage mapping and comparative analysis of bovine expressed sequence tags (ESTs). Anim Genet 2000; 31:171-177.
    • (2000) Anim Genet , vol.31 , pp. 171-177
    • Grosse, W.M.1    Kappes, S.M.2    McGraw, R.A.3
  • 14
    • 0034977074 scopus 로고    scopus 로고
    • A microsatellite-based genetic linkage map for channel catfish, Ictalurus punctatus
    • Waldbieser GC, Bosworth BG, Nonneman DJ, Wolters WR. A microsatellite-based genetic linkage map for channel catfish, Ictalurus punctatus. Genetics 2001; 158:727-734.
    • (2001) Genetics , vol.158 , pp. 727-734
    • Waldbieser, G.C.1    Bosworth, B.G.2    Nonneman, D.J.3    Wolters, W.R.4
  • 15
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing B, Millier L, Wendl MC, Green P. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 1998; 8:175-185.
    • (1998) Genome Res , vol.8 , pp. 175-185
    • Ewing, B.1    Millier, L.2    Wendl, M.C.3    Green, P.4
  • 16
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • Ewing B, Green P. Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 1998; 8:186-194.
    • (1998) Genome Res , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 17
    • 0036137277 scopus 로고    scopus 로고
    • DNA sequence quality trimming and vector removal
    • Chou H-H, Holmes MH. DNA sequence quality trimming and vector removal. Bioinformatics 2001; 17:1093-1104.
    • (2001) Bioinformatics , vol.17 , pp. 1093-1104
    • Chou, H.-H.1    Holmes, M.H.2
  • 19
    • 0004222748 scopus 로고    scopus 로고
    • Rozen S, Skaletsky HJ. Primer3. 1998. Code available at http://www-genome.wi.mit. edu/genome_software/other/primer3.html.
    • (1998) Primer3
    • Rozen, S.1    Skaletsky, H.J.2
  • 20
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen S, Skaletsky HJ. Primer3 on the WWW for general users and for biologist programmers. Methods Molec Biol 2000; 132:365-386.
    • (2000) Methods Molec Biol , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.J.2
  • 21
    • 0037138401 scopus 로고    scopus 로고
    • Transcriptome analysis of channel catfish (Ictalurus punctatus): Initial analysis of gene expression and microsatellite-containing cDNAs in the skin
    • Karsi A, Cao D, Li P, Patterson A, Kocabas A, Feng J, Ju Z, Mickett KD, Liu Z. Transcriptome analysis of channel catfish (Ictalurus punctatus): Initial analysis of gene expression and microsatellite-containing cDNAs in the skin. Gene 2002; 285:157-168.
    • (2002) Gene , vol.285 , pp. 157-168
    • Karsi, A.1    Cao, D.2    Li, P.3    Patterson, A.4    Kocabas, A.5    Feng, J.6    Ju, Z.7    Mickett, K.D.8    Liu, Z.9
  • 22
    • 0033609390 scopus 로고    scopus 로고
    • Transcribed dinucleotide microsatellites and their associated genes from channel catfish Ictalurus punctatus
    • Liu Z, Tan G, Li P, Dunham RA. Transcribed dinucleotide microsatellites and their associated genes from channel catfish Ictalurus punctatus. Biochem Biophys Res Comm 1999; 259:190-194.
    • (1999) Biochem Biophys Res Comm , vol.259 , pp. 190-194
    • Liu, Z.1    Tan, G.2    Li, P.3    Dunham, R.A.4
  • 23
    • 0035976794 scopus 로고    scopus 로고
    • Microsatellite-containing genes from the channel catfish brain: Evidence of trinucleotide repeat expansion in the coding region of nucleotide excision repair gene RAD23B
    • Liu Z, Li P, Kocabas A, Karsi A, Ju Z. Microsatellite-containing genes from the channel catfish brain: Evidence of trinucleotide repeat expansion in the coding region of nucleotide excision repair gene RAD23B. Biochem Biophys Res Comm 2001; 289:317-324.
    • (2001) Biochem Biophys Res Comm , vol.289 , pp. 317-324
    • Liu, Z.1    Li, P.2    Kocabas, A.3    Karsi, A.4    Ju, Z.5
  • 26
    • 0034242619 scopus 로고    scopus 로고
    • Decreased growth in angus steers with a short TG-microsatellite allele in the PI promoter of the growth hormone receptor gene
    • Hale CS, Herring WO, Shibuya H, Lucy MC, Lubahn DB, Keisler DH, Johnson GS. Decreased growth in angus steers with a short TG-microsatellite allele in the PI promoter of the growth hormone receptor gene. J Anim Sci 2000; 78:2099-2104.
    • (2000) J Anim Sci , vol.78 , pp. 2099-2104
    • Hale, C.S.1    Herring, W.O.2    Shibuya, H.3    Lucy, M.C.4    Lubahn, D.B.5    Keisler, D.H.6    Johnson, G.S.7
  • 27
    • 0036366727 scopus 로고    scopus 로고
    • Microsatellite variation associated with prolactin expression and growth of salt-challenged tilapia
    • Streelman JT, Kocher TD. Microsatellite variation associated with prolactin expression and growth of salt-challenged tilapia. Physiol Genom 2002; 9:1-4.
    • (2002) Physiol Genom , vol.9 , pp. 1-4
    • Streelman, J.T.1    Kocher, T.D.2
  • 28
    • 0028814547 scopus 로고
    • Differential effects of simple repeating DNA sequences on gene expression from the SV40 early promoter
    • Amirhaeri S, Wohlrab F, Wells RD. Differential effects of simple repeating DNA sequences on gene expression from the SV40 early promoter. J Biol Chem 1995; 270:3313-3319.
    • (1995) J Biol Chem , vol.270 , pp. 3313-3319
    • Amirhaeri, S.1    Wohlrab, F.2    Wells, R.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.