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Volumn 92, Issue 3, 2005, Pages 321-335

Novel quantitative tools for engineering analysis of hepatocyte cultures in bioartificial liver systems

Author keywords

Hepatocytes; Linear programming optimization; Metabolic flux analysis

Indexed keywords

FUNCTIONS; LINEAR PROGRAMMING; METABOLISM; OPTIMIZATION; PARAMETER ESTIMATION; PATIENT TREATMENT;

EID: 27744590742     PISSN: 00063592     EISSN: None     Source Type: Journal    
DOI: 10.1002/bit.20586     Document Type: Article
Times cited : (27)

References (46)
  • 1
    • 0036772334 scopus 로고    scopus 로고
    • Engineering liver therapies for the future
    • Allen JW, Bhatia SN. 2002. Engineering liver therapies for the future. Tissue Eng 8:725-737.
    • (2002) Tissue Eng , vol.8 , pp. 725-737
    • Allen, J.W.1    Bhatia, S.N.2
  • 3
    • 0033808169 scopus 로고    scopus 로고
    • Leucine stimulates translation initiation in skeletal muscle of postabsorptive rats via a rapamycin-sensitive pathway
    • Anthony JC, Yoshizawa F, Anthony TG, Vary TC, Jefferson LS, Kimball SR. 2000. Leucine stimulates translation initiation in skeletal muscle of postabsorptive rats via a rapamycin-sensitive pathway. J Nutr 130:2413-2419.
    • (2000) J Nutr , vol.130 , pp. 2413-2419
    • Anthony, J.C.1    Yoshizawa, F.2    Anthony, T.G.3    Vary, T.C.4    Jefferson, L.S.5    Kimball, S.R.6
  • 4
    • 0034923583 scopus 로고    scopus 로고
    • Intrahepatic amino acid and glucose metabolism in a D-galactosamine- induced rat liver failure model
    • Arai K, Lee K, Berthiaume F, Tompkins RG, Yarmush ML. 2001. Intrahepatic amino acid and glucose metabolism in a D-galactosamine-induced rat liver failure model. Hepatology 34:360-371.
    • (2001) Hepatology , vol.34 , pp. 360-371
    • Arai, K.1    Lee, K.2    Berthiaume, F.3    Tompkins, R.G.4    Yarmush, M.L.5
  • 6
  • 8
    • 0000532112 scopus 로고
    • Multifactorial designs for exploring response surfaces
    • Box GEP, Hunter JS. 1957. Multifactorial designs for exploring response surfaces. Ann Math Stat 28:195-241.
    • (1957) Ann Math Stat , vol.28 , pp. 195-241
    • Box, G.E.P.1    Hunter, J.S.2
  • 9
    • 0032556891 scopus 로고    scopus 로고
    • Last chance to stop and think on risks of xenotransplants
    • Butler D. 1998. Last chance to stop and think on risks of xenotransplants. Nature 391:320-324.
    • (1998) Nature , vol.391 , pp. 320-324
    • Butler, D.1
  • 10
    • 0012959337 scopus 로고    scopus 로고
    • Metabolic flux analysis of cultured hepatocytes exposed to plasma
    • Chan C, Berthiaume F, Lee K, Yarmush ML. 2003a. Metabolic flux analysis of cultured hepatocytes exposed to plasma. Biotechnol Bioeng 81:33-49.
    • (2003) Biotechnol Bioeng , vol.81 , pp. 33-49
    • Chan, C.1    Berthiaume, F.2    Lee, K.3    Yarmush, M.L.4
  • 12
    • 0032348480 scopus 로고    scopus 로고
    • Normal-boundary intersection: A new method for generating the Pareto surface in nonlinear multicriteria optimization problems
    • Das I, Dennis JE. 1998. Normal-boundary intersection: A new method for generating the Pareto surface in nonlinear multicriteria optimization problems. Siam J Optimization 8:631-657.
    • (1998) Siam J Optimization , vol.8 , pp. 631-657
    • Das, I.1    Dennis, J.E.2
  • 14
    • 0032488276 scopus 로고    scopus 로고
    • Chinese hamster ovary cells with constitutively expressed sialidase antisense RNA produce recombinant DNase in batch culture with increased sialic acid
    • Ferrari J, Gunson J, Lofgren J, Krummen L, Warner TG. 1998. Chinese hamster ovary cells with constitutively expressed sialidase antisense RNA produce recombinant DNase in batch culture with increased sialic acid. Biotechnol Bioeng 60:589-595.
    • (1998) Biotechnol Bioeng , vol.60 , pp. 589-595
    • Ferrari, J.1    Gunson, J.2    Lofgren, J.3    Krummen, L.4    Warner, T.G.5
  • 15
    • 0020078743 scopus 로고
    • The role of amino acids in the regulation of protein synthesis in perfused rat liver. I. Reduction in rates of synthesis resulting from amino acid deprivation and recovery during flow-through perfusion
    • Flaim KE, Peavy DE, Everson WV, Jefferson LS. 1982a. The role of amino acids in the regulation of protein synthesis in perfused rat liver. I. Reduction in rates of synthesis resulting from amino acid deprivation and recovery during flow-through perfusion. J Biol Chem 257:2932-2938.
    • (1982) J Biol Chem , vol.257 , pp. 2932-2938
    • Flaim, K.E.1    Peavy, D.E.2    Everson, W.V.3    Jefferson, L.S.4
  • 16
    • 0020069645 scopus 로고
    • The role of amino acids in the regulation of protein synthesis in perfused rat liver. II. Effects of amino acid deficiency on peptide chain initiation, polysomal aggregation, and distribution of albumin mRNA
    • Flaim KE, Liao WSL, Peavy DE, Taylor JM, Jefferson LS. 1982b. The role of amino acids in the regulation of protein synthesis in perfused rat liver. II. Effects of amino acid deficiency on peptide chain initiation, polysomal aggregation, and distribution of albumin mRNA. J Biol Chem 257:2939-2946.
    • (1982) J Biol Chem , vol.257 , pp. 2939-2946
    • Flaim, K.E.1    Liao, W.S.L.2    Peavy, D.E.3    Taylor, J.M.4    Jefferson, L.S.5
  • 17
    • 0035866183 scopus 로고    scopus 로고
    • Streptogramin- and tetracycline-responsive dual regulated expression of p27(Kipl) sense and antisense enables positive and negative growth control of Chinese hamster ovary cells
    • Fux C, Moser S, Schlatter S, Rimann M, Bailey JE, Fussenegger M. 2001. Streptogramin- and tetracycline-responsive dual regulated expression of p27(Kipl) sense and antisense enables positive and negative growth control of Chinese hamster ovary cells. Nucleic Acids Res 29:E19.
    • (2001) Nucleic Acids Res , vol.29
    • Fux, C.1    Moser, S.2    Schlatter, S.3    Rimann, M.4    Bailey, J.E.5    Fussenegger, M.6
  • 18
    • 85012811498 scopus 로고
    • Integrated system identification and optimization
    • Haimes YY. 1973. Integrated system identification and optimization. Cont Dyn Sys: Adv Theory Appl 10:435.
    • (1973) Cont Dyn Sys: Adv Theory Appl , vol.10 , pp. 435
    • Haimes, Y.Y.1
  • 19
    • 0035218927 scopus 로고    scopus 로고
    • Generalized homotopy approach to multiobjective optimization
    • Hillermeier C. 2001. Generalized homotopy approach to multiobjective optimization. J Optimization Theory Appl 110:557-583.
    • (2001) J Optimization Theory Appl , vol.110 , pp. 557-583
    • Hillermeier, C.1
  • 20
    • 1542400266 scopus 로고    scopus 로고
    • Inverse modeling using multiblock PLS to determine the environmental conditions that provide optimal cellular function
    • Hwang D, Stephanopoulos G, Chan C. 2004. Inverse modeling using multiblock PLS to determine the environmental conditions that provide optimal cellular function. Biomformatics 20:487-499.
    • (2004) Biomformatics , vol.20 , pp. 487-499
    • Hwang, D.1    Stephanopoulos, G.2    Chan, C.3
  • 21
    • 0037470863 scopus 로고    scopus 로고
    • Branched chain amino acids promote albumin synthesis in rat primary hepatocytes through the mTOR signal transduction pathway
    • Ijichi C, Matsumura T, Tsuji T, Eto Y. 2003. Branched chain amino acids promote albumin synthesis in rat primary hepatocytes through the mTOR signal transduction pathway. Biochem Biophys Res Comm 303:59-64.
    • (2003) Biochem Biophys Res Comm , vol.303 , pp. 59-64
    • Ijichi, C.1    Matsumura, T.2    Tsuji, T.3    Eto, Y.4
  • 23
    • 0026072956 scopus 로고
    • Mechanism of inhibition of peptide chain initiation by amino acid deprivation in perfused rat liver. Regulation involving inhibition of eukaryotic initiation factor 2α phophatase activity
    • Kimball SR, Jefferson LS. 1991. Mechanism of inhibition of peptide chain initiation by amino acid deprivation in perfused rat liver. Regulation involving inhibition of eukaryotic initiation factor 2α phophatase activity. J Biol Chem 266:1969-1976.
    • (1991) J Biol Chem , vol.266 , pp. 1969-1976
    • Kimball, S.R.1    Jefferson, L.S.2
  • 24
    • 0029873066 scopus 로고    scopus 로고
    • Translational and pretranslational regulation of protein synthesis by amino acid availability in primary cultures of rat hepatocytes
    • Kimball SR, Yancisin M, Horetsky RL, Jefferson LS. 1996. Translational and pretranslational regulation of protein synthesis by amino acid availability in primary cultures of rat hepatocytes. Int J Biochem Cell Biol 28:285-294.
    • (1996) Int J Biochem Cell Biol , vol.28 , pp. 285-294
    • Kimball, S.R.1    Yancisin, M.2    Horetsky, R.L.3    Jefferson, L.S.4
  • 25
    • 0141644297 scopus 로고    scopus 로고
    • Cell choice for bioartificial livers
    • Kobayashi N, Okitsu T, Tanaka N. 2003. Cell choice for bioartificial livers. Keio J Med 52:151-157.
    • (2003) Keio J Med , vol.52 , pp. 151-157
    • Kobayashi, N.1    Okitsu, T.2    Tanaka, N.3
  • 26
    • 0034135676 scopus 로고    scopus 로고
    • Optimization of isoamyl acetate production by using immobilized lipase from Mucor miehei by response surface methodology
    • Krishna SH, Manohar B, Divakar S, Prapulla SG, Karanth NG. 2000. Optimization of isoamyl acetate production by using immobilized lipase from Mucor miehei by response surface methodology. Enzyme Microb Technol 26:131-136.
    • (2000) Enzyme Microb Technol , vol.26 , pp. 131-136
    • Krishna, S.H.1    Manohar, B.2    Divakar, S.3    Prapulla, S.G.4    Karanth, N.G.5
  • 27
    • 0036021408 scopus 로고    scopus 로고
    • General statistics of stochastic process of gene expression in eukaryotic cells
    • Kuznetsov VA, Knott GD, Bonner RF. 2002. General statistics of stochastic process of gene expression in eukaryotic cells. Genetics 161:1321-1332.
    • (2002) Genetics , vol.161 , pp. 1321-1332
    • Kuznetsov, V.A.1    Knott, G.D.2    Bonner, R.F.3
  • 28
    • 0026882306 scopus 로고
    • The importance of proline on long term hepatocyte function in a collagen gel sandwich configuration: Regulation of protein secretion
    • Lee J, Morgan JR, Tompkins RG, Yarmush ML. 1992. The importance of proline on long term hepatocyte function in a collagen gel sandwich configuration: Regulation of protein secretion. Biotech Bioeng 40:298-305.
    • (1992) Biotech Bioeng , vol.40 , pp. 298-305
    • Lee, J.1    Morgan, J.R.2    Tompkins, R.G.3    Yarmush, M.L.4
  • 29
    • 0027529529 scopus 로고
    • Proline-mediated enhancement of hepatocyte function in a collagen gel sandwich culture configuration
    • Lee J, Morgan JR, Tompkins RG, Yarmush ML. 1993. Proline-mediated enhancement of hepatocyte function in a collagen gel sandwich culture configuration. FASEB J 7:586-591.
    • (1993) FASEB J , vol.7 , pp. 586-591
    • Lee, J.1    Morgan, J.R.2    Tompkins, R.G.3    Yarmush, M.L.4
  • 30
    • 0032787428 scopus 로고    scopus 로고
    • Metabolic flux analysis: A powerful tool for monitoring tissue function
    • Lee K, Berthiaume F, Stephanopoulos GN, Yarmush ML. 1999. Metabolic flux analysis: A powerful tool for monitoring tissue function. Tissue Eng 5:347-368.
    • (1999) Tissue Eng , vol.5 , pp. 347-368
    • Lee, K.1    Berthiaume, F.2    Stephanopoulos, G.N.3    Yarmush, M.L.4
  • 32
    • 0028260451 scopus 로고
    • Effect of amino acid limitation on the expression of 19 genes in rat hepatoma cells
    • Marten NW, Burke EJ, Hayden JM, Straus DS. 1994. Effect of amino acid limitation on the expression of 19 genes in rat hepatoma cells. FASEB J 8:538-544.
    • (1994) FASEB J , vol.8 , pp. 538-544
    • Marten, N.W.1    Burke, E.J.2    Hayden, J.M.3    Straus, D.S.4
  • 34
    • 0037026503 scopus 로고    scopus 로고
    • Engineering of coordinated up- and down-regulation of two glycosyltransferases of the O-glycosylation pathway in Chinese hamster ovary (CHO) cells
    • Prati EG, Matasci M, Suter TB, Dinter A, Sburlati AR, Bailey JE. 2002. Engineering of coordinated up- and down-regulation of two glycosyltransferases of the O-glycosylation pathway in Chinese hamster ovary (CHO) cells. Biotechnol Bioeng 79:580-585.
    • (2002) Biotechnol Bioeng , vol.79 , pp. 580-585
    • Prati, E.G.1    Matasci, M.2    Suter, T.B.3    Dinter, A.4    Sburlati, A.R.5    Bailey, J.E.6
  • 35
    • 0018101626 scopus 로고
    • Effects of amino acids, ammonia and leupeptin on protein synthesis and degradation in isolated rat hepatocytes
    • Seglen PO. 1978. Effects of amino acids, ammonia and leupeptin on protein synthesis and degradation in isolated rat hepatocytes. Biochem J 174:469-474.
    • (1978) Biochem J , vol.174 , pp. 469-474
    • Seglen, P.O.1
  • 37
    • 0023786185 scopus 로고
    • Regulation of albumin mRNA in H4 rat hepatoma cells by the availability of essential amino acids
    • Straus DS, Takemoto CD. 1988. Regulation of albumin mRNA in H4 rat hepatoma cells by the availability of essential amino acids. Biochim Biophys Acta 972:33-36.
    • (1988) Biochim Biophys Acta , vol.972 , pp. 33-36
    • Straus, D.S.1    Takemoto, C.D.2
  • 38
    • 0033155962 scopus 로고    scopus 로고
    • Bioreaction network topology and metabolic flux ratio analysis by biosynthetic fractional 13C labeling and two-dimensional NMR spectroscopy
    • Szyperski T, Glaser RW, Hochuli M, Fiaux J, Sauer U, Bailey JE, Wuthrich K. 1999. Bioreaction network topology and metabolic flux ratio analysis by biosynthetic fractional 13C labeling and two-dimensional NMR spectroscopy. Metab Eng 1:189-197.
    • (1999) Metab Eng , vol.1 , pp. 189-197
    • Szyperski, T.1    Glaser, R.W.2    Hochuli, M.3    Fiaux, J.4    Sauer, U.5    Bailey, J.E.6    Wuthrich, K.7
  • 40
    • 0015781815 scopus 로고
    • Effects of hypophysectomy on amino acid metabolism and gluconeogenesis in the perfused rat liver
    • Tolman EL, Schworer CM, Jefferson LS. 1973. Effects of hypophysectomy on amino acid metabolism and gluconeogenesis in the perfused rat liver. J Biol Chem 248:4552-4560.
    • (1973) J Biol Chem , vol.248 , pp. 4552-4560
    • Tolman, E.L.1    Schworer, C.M.2    Jefferson, L.S.3
  • 41
    • 0033752395 scopus 로고    scopus 로고
    • Amino acid supplementation improves cell-specific functions of the rat hepatocytes exposed to human plasma
    • Washizu J, Chan C, Berthiaume F, Tompkins RG, Toner M, Yarmush ML. 2000. Amino acid supplementation improves cell-specific functions of the rat hepatocytes exposed to human plasma. Tissue Eng 6:497-504.
    • (2000) Tissue Eng , vol.6 , pp. 497-504
    • Washizu, J.1    Chan, C.2    Berthiaume, F.3    Tompkins, R.G.4    Toner, M.5    Yarmush, M.L.6
  • 42
    • 0000050981 scopus 로고    scopus 로고
    • Challenges in stochastic programming
    • Wets RJB. 1996. Challenges in stochastic programming. Math Programming 75:115-135.
    • (1996) Math Programming , vol.75 , pp. 115-135
    • Wets, R.J.B.1
  • 43
    • 0034741983 scopus 로고    scopus 로고
    • 13C metabolic flux analysis
    • Wiechert W. 2001. 13C metabolic flux analysis. Metab Eng Metab Eng 3:195-206.
    • (2001) Metab Eng Metab Eng , vol.3 , pp. 195-206
    • Wiechert, W.1
  • 44
    • 0642305408 scopus 로고    scopus 로고
    • Metabolic engineering: Advances in modeling and intervention in health and disease
    • Yarmush ML, Banta S. 2003. Metabolic engineering: Advances in modeling and intervention in health and disease. Annu Rev Biomed Eng 5:349-381.
    • (2003) Annu Rev Biomed Eng , vol.5 , pp. 349-381
    • Yarmush, M.L.1    Banta, S.2


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