-
1
-
-
84948878799
-
Periodic operation of chemical reactors: A review
-
Bailey JE. 1973, Periodic operation of chemical reactors: A review. Chem Eng Commun 1:111.
-
(1973)
Chem Eng Commun
, vol.1
, pp. 111
-
-
Bailey, J.E.1
-
2
-
-
0025895183
-
Toward a science of metabolic engineering
-
Bailey JE. 1991. Toward a science of metabolic engineering. Science 252(5013):1668-1675.
-
(1991)
Science
, vol.252
, Issue.5013
, pp. 1668-1675
-
-
Bailey, J.E.1
-
3
-
-
0031933027
-
Mathematical modeling and analysis in biochemical engineering: Past accomplishments and future opportunities
-
Bailey JE. 1998. Mathematical modeling and analysis in biochemical engineering: Past accomplishments and future opportunities. Biotechnol Progr 14(1):8-20.
-
(1998)
Biotechnol Progr
, vol.14
, Issue.1
, pp. 8-20
-
-
Bailey, J.E.1
-
5
-
-
3543003496
-
Asprey SP on the design of optimally informative experiments for dynamic crystallization process modeling
-
Chen BH, Bermingham S, Neumann AH, Kramer HJM. 2004. Asprey SP On the design of optimally informative experiments for dynamic crystallization process modeling. Ind Eng Chem Res 43(16):4889-4902.
-
(2004)
Ind Eng Chem Res
, vol.43
, Issue.16
, pp. 4889-4902
-
-
Chen, B.H.1
Bermingham, S.2
Neumann, A.H.3
Hjm, K.4
-
6
-
-
0035441714
-
Evaluation of the Princeton Ocean model using South China Sea monsoon experiment (SCSMEX) data
-
Chu PC, Lu SH, Chen YC. 2001. Evaluation of the Princeton Ocean model using South China Sea monsoon experiment (SCSMEX) data. J Atmos Oceanic Tech 18(9):1521-1539.
-
(2001)
J Atmos Oceanic Tech
, vol.18
, Issue.9
, pp. 1521-1539
-
-
Chu, P.C.1
Lu, S.H.2
Chen, Y.C.3
-
7
-
-
0033581959
-
Sustained oscillations in living cells
-
Dano S, Sorensen PG, Hynne F. 1999. Sustained oscillations in living cells. Nature 402:320-322.
-
(1999)
Nature
, vol.402
, pp. 320-322
-
-
Dano, S.1
Sorensen, P.G.2
Hynne, F.3
-
8
-
-
0029725240
-
Design of process-compatible biological agents
-
Dean JP, Dervakos GA. 1996. Design of process-compatible biological agents. Comp Chem Eng 20(Suppl):S67-S72.
-
(1996)
Comp Chem Eng
, vol.20
, Issue.SUPPL.
-
-
Dean, J.P.1
Dervakos, G.A.2
-
10
-
-
0033299463
-
Neural network modelling of surface aeration in fermenters
-
Grammatika M, Zimmerman WB. 1999. Neural network modelling of surface aeration in fermenters. IChemE Symp Ser 146:227-234.
-
(1999)
IChemE Symp Ser
, vol.146
, pp. 227-234
-
-
Grammatika, M.1
Zimmerman, W.B.2
-
11
-
-
0037457491
-
Free intracellular amino acid pools during autonomous oscillations in Saccharomyces cerevisiae
-
Hans MA, Heinzle E, Wittmann C. 2003. Free intracellular amino acid pools during autonomous oscillations in Saccharomyces cerevisiae. Biotech Bioeng 82(2):143-151.
-
(2003)
Biotech Bioeng
, vol.82
, Issue.2
, pp. 143-151
-
-
Hans, M.A.1
Heinzle, E.2
Wittmann, C.3
-
12
-
-
0037473190
-
Quantitative comparison of transient growth of Saccharomyces cerevisiae, Saccharomyces kluyveri, and Kluyveromyces lactis
-
Herwig C, von Stockar U. 2003. Quantitative comparison of transient growth of Saccharomyces cerevisiae, Saccharomyces kluyveri, and Kluyveromyces lactis. Biotechnol Bioeng 81(7):837-847.
-
(2003)
Biotechnol Bioeng
, vol.81
, Issue.7
, pp. 837-847
-
-
Herwig, C.1
Von Stockar, U.2
-
13
-
-
0037342537
-
The systems biology markup language (SBML): A medium for representation and exchange of biochemical network models
-
Hucka M, Finney A, Sauro HM, Bolouri H, Doyle JC, Kitano H, Arkin AP, Bornstein BJ, Bray D, Cornish-Bowden A, Cuellar AA, Dronov S, Gilles ED, Ginkel M, Gor V, Goryanin II, Hedley WJ, Hodgman TC, Hofmeyr JH, Hunter PJ, Juty NS, Kasberger JL, Kremling A, Kummer U, Le Novere N, Loew LM, Lucio D, Mendes P, Minch E, Mjolsness ED, Nakayama Y, Nelson MR, Nielsen PF, Sakurada T, Schaff JC, Shapiro BE, Shimizu TS, Spence HD, Stelling J, Takahashi K, Tomita M, Wagner J, Wang J. 2003. The systems biology markup language (SBML): A medium for representation and exchange of biochemical network models. Bioinformatics 19(4):524-531.
-
(2003)
Bioinformatics
, vol.19
, Issue.4
, pp. 524-531
-
-
Hucka, M.1
Finney, A.2
Sauro, H.M.3
Bolouri, H.4
Doyle, J.C.5
Kitano, H.6
Arkin, A.P.7
Bornstein, B.J.8
Bray, D.9
Cornish-Bowden, A.10
Cuellar, A.A.11
Dronov, S.12
Gilles, E.D.13
Ginkel, M.14
Gor, V.15
Goryanin, I.I.16
Hedley, W.J.17
Hodgman, T.C.18
Hofmeyr, J.H.19
Hunter, P.J.20
Juty, N.S.21
Kasberger, J.L.22
Kremling, A.23
Kummer, U.24
Le Novere, N.25
Loew, L.M.26
Lucio, D.27
Mendes, P.28
Minch, E.29
Mjolsness, E.D.30
Nakayama, Y.31
Nelson, M.R.32
Nielsen, P.F.33
Sakurada, T.34
Schaff, J.C.35
Shapiro, B.E.36
Shimizu, T.S.37
Spence, H.D.38
Stelling, J.39
Takahashi, K.40
Tomita, M.41
Wagner, J.42
Wang, J.43
more..
-
14
-
-
0036699323
-
Direct flow-pattern identification using electrical capacitance tomography
-
Jeanmeure LFC, Dyakowski T, Zimmerman WBJ, Clark W. 2002. Direct flow-pattern identification using electrical capacitance tomography. Exp Therm Fluid Sci 26(6-7):763-773.
-
(2002)
Exp Therm Fluid Sci
, vol.26
, Issue.6-7
, pp. 763-773
-
-
Jeanmeure, L.F.C.1
Dyakowski, T.2
Zimmerman, W.B.J.3
Clark, W.4
-
15
-
-
0038288533
-
Assimilation of satellite altimetry into a Western North Pacific operational model
-
Kamachi M, Kuragano T, Yoshioka N, Zhu J, Uboldi F. 2001. Assimilation of satellite altimetry into a Western North Pacific operational model. Adv Atmos Sci 18(5):767-786.
-
(2001)
Adv Atmos Sci
, vol.18
, Issue.5
, pp. 767-786
-
-
Kamachi, M.1
Kuragano, T.2
Yoshioka, N.3
Zhu, J.4
Uboldi, F.5
-
16
-
-
0347719314
-
Anatomy of a chaotic attractor: Subtle model-predicted patterns revealed in population data
-
King AA, Costantino RF, Cushing JM, Henson SM, Desharnais RA, Dennis B. 2004. Anatomy of a chaotic attractor: Subtle model-predicted patterns revealed in population data. Proc Nat Acad Sci USA 101(1):408-413.
-
(2004)
Proc Nat Acad Sci USA
, vol.101
, Issue.1
, pp. 408-413
-
-
King, A.A.1
Costantino, R.F.2
Cushing, J.M.3
Henson, S.M.4
Desharnais, R.A.5
Dennis, B.6
-
17
-
-
0021758869
-
Chaotic dynamics in yeast glycolysis under periodic substrate input flux
-
Markus M, Kuschmitz D, Hess B. 1994. Chaotic dynamics in yeast glycolysis under periodic substrate input flux. FEBS Lett 172(2):235-238.
-
(1994)
FEBS Lett
, vol.172
, Issue.2
, pp. 235-238
-
-
Markus, M.1
Kuschmitz, D.2
Hess, B.3
-
18
-
-
0032406131
-
Non-linear optimization of biochemical pathways: Applications to metabolic engineering and parameter estimation
-
Mendes P, Kell DB. 1998. Non-linear optimization of biochemical pathways: Applications to metabolic engineering and parameter estimation. Bioinformatics 14(10):869-883.
-
(1998)
Bioinformatics
, vol.14
, Issue.10
, pp. 869-883
-
-
Mendes, P.1
Kell, D.B.2
-
19
-
-
0000238336
-
A simplex method for function minimization
-
Nelder JA, Mead R. 1965. A simplex method for function minimization. Comp J 7:308-313.
-
(1965)
Comp J
, vol.7
, pp. 308-313
-
-
Nelder, J.A.1
Mead, R.2
-
21
-
-
1242283920
-
In silico biotechnology: Era of reconstruction and interrogation
-
Palsson BO. 2004. In silico biotechnology: era of reconstruction and interrogation. Curr Opin Biotechnol 15:50-51.
-
(2004)
Curr Opin Biotechnol
, vol.15
, pp. 50-51
-
-
Palsson, B.O.1
-
22
-
-
0022715626
-
Induction and elimination of oscillations in continuous cultures of Saccharomyces-cerevisiae
-
Parulekar SJ, Semones GB, Rolf MJ, Lievense JC, Lim HC. 1986. Induction and elimination of oscillations in continuous cultures of Saccharomyces- cerevisiae. Biotech Bioeng 28:700-710.
-
(1986)
Biotech Bioeng
, vol.28
, pp. 700-710
-
-
Parulekar, S.J.1
Semones, G.B.2
Rolf, M.J.3
Lievense, J.C.4
Lim, H.C.5
-
23
-
-
0343035686
-
Stoichiometric model of Escherichia coli metabolism: Incorporation of growth-rate dependent biomass composition and mechanistic energy requirements
-
Pramanik J, Keasling JD. 1997. Stoichiometric model of Escherichia coli metabolism: Incorporation of growth-rate dependent biomass composition and mechanistic energy requirements. Biotechnol Bioeng 56(4):398-421.
-
(1997)
Biotechnol Bioeng
, vol.56
, Issue.4
, pp. 398-421
-
-
Pramanik, J.1
Keasling, J.D.2
-
24
-
-
0036038886
-
Schemes of flux control in a model of Saccharomyces cerevisiae glycolysis
-
Pritchard L, Kell DB. 2002. Schemes of flux control in a model of Saccharomyces cerevisiae glycolysis. Eur J Biochem 269(16):3894-3904.
-
(2002)
Eur J Biochem
, vol.269
, Issue.16
, pp. 3894-3904
-
-
Pritchard, L.1
Kell, D.B.2
-
25
-
-
0006298175
-
-
Chance B, Pye EK, Ghosh AK, Hess B, editors. New York: Academic Press
-
Pye EK. 1973. In: Biochemical and Biological Oscillators. Chance B, Pye EK, Ghosh AK, Hess B, editors. New York: Academic Press. pp 269-283.
-
(1973)
Biochemical and Biological Oscillators
, pp. 269-283
-
-
Pye, E.K.1
-
26
-
-
0036216077
-
Control analysis for autonomously oscillating biochemical networks
-
Reijenga KA, Westerhoff HV, Kholodenko BN, Snoep JL. 2002. Control analysis for autonomously oscillating biochemical networks. Biophys J 82(1):99-108.
-
(2002)
Biophys J
, vol.82
, Issue.1
, pp. 99-108
-
-
Reijenga, K.A.1
Westerhoff, H.V.2
Kholodenko, B.N.3
Snoep, J.L.4
-
27
-
-
0141783646
-
The rhythm of yeast
-
Richard P. 2003. The rhythm of yeast. FEMS Microbiol Rev 27:547-557.
-
(2003)
FEMS Microbiol Rev
, vol.27
, pp. 547-557
-
-
Richard, P.1
-
28
-
-
0041744850
-
On the deduction of chemical reaction pathways from measurements of time series concentrations
-
Samoilov M, Arkin A, Ross J. 2001. On the deduction of chemical reaction pathways from measurements of time series concentrations. Chaos 11(1):108.
-
(2001)
Chaos
, vol.11
, Issue.1
, pp. 108
-
-
Samoilov, M.1
Arkin, A.2
Ross, J.3
-
29
-
-
0028052437
-
Ethanol-production in bakers-yeast-application of experimental perturbation techniques for model development and resultant changes in flux control analysis
-
Schlosser PM, Riedy TG, Bailey JE. 1994. Ethanol-production in bakers-yeast-application of experimental perturbation techniques for model development and resultant changes in flux control analysis. Biotechnol Prog 10(2):141-154.
-
(1994)
Biotechnol Prog
, vol.10
, Issue.2
, pp. 141-154
-
-
Schlosser, P.M.1
Riedy, T.G.2
Bailey, J.E.3
-
30
-
-
0030226444
-
On the topological features of optimal metabolic pathway regimes
-
See SM, Dean JP, Dervakos GA. 1996. On the topological features of optimal metabolic pathway regimes. Appl Biochem Biotechnol 60(3):251-301.
-
(1996)
Appl Biochem Biotechnol
, vol.60
, Issue.3
, pp. 251-301
-
-
See, S.M.1
Dean, J.P.2
Dervakos, G.A.3
-
31
-
-
27844484782
-
-
Systems Biology Workbench Developement Group, California Institute of Technology
-
Shapiro BE. 2004. MathSMBL.m: The Mathematica SBML Reader. Systems Biology Workbench Developement Group, California Institute of Technology, http://www.sbml.org.
-
(2004)
MathSMBL.m: The Mathematica SBML Reader
-
-
Shapiro, B.E.1
-
32
-
-
4444322221
-
Robustness properties of circadian clock architectures
-
Stelling J, Gilles ED, Doyle FJ. 2004. Robustness properties of circadian clock architectures. PNAS 101(36):13210-13215.
-
(2004)
PNAS
, vol.101
, Issue.36
, pp. 13210-13215
-
-
Stelling, J.1
Gilles, E.D.2
Doyle, F.J.3
-
34
-
-
0033857139
-
Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochem
-
Teusink B, Passarge J, Reijenga CA, Esgalhado E, van der Weijden CC, Schepper M, Walsh MC, Bakker BM, van Dam K, Westerhoff HV, Snoep JL. 2000. Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochem Eur J Biochem 267(17):5313-5329.
-
(2000)
Eur J Biochem
, vol.267
, Issue.17
, pp. 5313-5329
-
-
Teusink, B.1
Passarge, J.2
Reijenga, C.A.3
Esgalhado, E.4
Van Der Weijden, C.C.5
Schepper, M.6
Walsh, M.C.7
Bakker, B.M.8
Van Dam, K.9
Westerhoff, H.V.10
Snoep, J.L.11
-
35
-
-
0042693078
-
Advantages of external periodic events to the evolution of biochemical oscillatory reactions
-
Tsuchiya M, Ross J. 2003. Advantages of external periodic events to the evolution of biochemical oscillatory reactions. PNAS 100(17):9691-9695.
-
(2003)
PNAS
, vol.100
, Issue.17
, pp. 9691-9695
-
-
Tsuchiya, M.1
Ross, J.2
-
36
-
-
0033662290
-
Tendency modeling: A new approach to obtain simplified kinetic models of metaoblism applied to Saccharomyces cerevisiae
-
Visser D, van der Heijden R, Mauch K, Reuss M, Heijnen S. 2000. Tendency modeling: a new approach to obtain simplified kinetic models of metaoblism applied to Saccharomyces cerevisiae. Metab Eng 2:252-275.
-
(2000)
Metab Eng
, vol.2
, pp. 252-275
-
-
Visser, D.1
Van Der Heijden, R.2
Mauch, K.3
Reuss, M.4
Heijnen, S.5
-
37
-
-
27844444883
-
Cheating Nyquist: Nonlinear model reconstruction with undersampled frequency response of a forced, damped, nonlinear oscillator
-
in press
-
Zimmerman WB. 2004a. Cheating Nyquist: Nonlinear model reconstruction with undersampled frequency response of a forced, damped, nonlinear oscillator. Chem Eng Sci (in press).
-
(2004)
Chem Eng Sci
-
-
Zimmerman, W.B.1
-
38
-
-
27844560281
-
Nonlinear model reconstruction by frequency and amplitude response for a heterogeneous binary reaction in a chemostat
-
in press
-
Zimmerman WB. 2004b. Nonlinear model reconstruction by frequency and amplitude response for a heterogeneous binary reaction in a chemostat. Chem Eng Sci (in press).
-
(2004)
Chem Eng Sci
-
-
Zimmerman, W.B.1
-
39
-
-
3042586697
-
Process Modeling and simulation with finite element methods
-
Guran A, Cloud M, Zimmerman WB, eds. Singapore: World Scientific
-
Zimmerman WB. 2004. Process Modeling and simulation with finite element methods. In: Guran A, Cloud M, Zimmerman WB, eds. World Scientific Series on Stability, Vibration, and Control of Systems. Singapore: World Scientific.
-
(2004)
World Scientific Series on Stability, Vibration, and Control of Systems
-
-
Zimmerman, W.B.1
|