메뉴 건너뛰기




Volumn 71, Issue 4, 2005, Pages 339-348

The H3/H4 histone gene cluster of land snails (Gastropoda: Stylommatophora): TS/TV Ratio, GC3 drive and signals in stylommatophoran phylogeny

Author keywords

[No Author keywords available]

Indexed keywords

SNAIL;

EID: 27144498609     PISSN: 02601230     EISSN: 14643766     Source Type: Journal    
DOI: 10.1093/mollus/eyi038     Document Type: Article
Times cited : (19)

References (45)
  • 1
    • 0031691532 scopus 로고    scopus 로고
    • Limitations of metazoa 18S rDNA sequence data: Implication for reconstructing a phylogeny of the animal kingdom and inferring the reality of the Cambrian explosion
    • ABOUHEIF, E., ZARDOYA, R. & MEYER, A. 1998. Limitations of metazoa 18S rDNA sequence data: implication for reconstructing a phylogeny of the animal kingdom and inferring the reality of the Cambrian explosion. Journal of Molecular Evolution, 47: 394-405.
    • (1998) Journal of Molecular Evolution , vol.47 , pp. 394-405
    • Abouheif, E.1    Zardoya, R.2    Meyer, A.3
  • 2
    • 0000501656 scopus 로고
    • Information theory and an extension of the maximum likelihood principle
    • B.N. Petrov & F. Csaki, eds, Akedemia Kiado, Budapest
    • AKAIKE, H. 1973. Information theory and an extension of the maximum likelihood principle. In: Proceedings of the second international symposium on information theory (B.N. Petrov & F. Csaki, eds), 267-281. Akedemia Kiado, Budapest.
    • (1973) Proceedings of the Second International Symposium on Information Theory , pp. 267-281
    • Akaike, H.1
  • 4
    • 0032738259 scopus 로고    scopus 로고
    • Potentials and limitations of histone repeat sequences for phylogenetic reconstruction of Sophophora
    • BALDO, A. M., LES, D.H. & STRAUSBAUGH, L.D. 1999. Potentials and limitations of histone repeat sequences for phylogenetic reconstruction of Sophophora. Molecular Biology and Evolution, 16: 1511-1520.
    • (1999) Molecular Biology and Evolution , vol.16 , pp. 1511-1520
    • Baldo, A.M.1    Les, D.H.2    Strausbaugh, L.D.3
  • 5
    • 0042669329 scopus 로고    scopus 로고
    • Gastropods on land: Phylogeny, diversity and adaptive morphology
    • G.M. Barker, ed., CABI Publishing, Oxford
    • BARKER, G.M. 2001. Gastropods on land: phylogeny, diversity and adaptive morphology. In: The biology of terrestrial molluscs (G.M. Barker, ed.), 1-146. CABI Publishing, Oxford.
    • (2001) The Biology of Terrestrial Molluscs , pp. 1-146
    • Barker, G.M.1
  • 6
    • 0031936015 scopus 로고    scopus 로고
    • Evolution of histone H4 and H3 genes in different ciliate lineages
    • BERNHARD, D. & SCHLEGEL, M. 1998. Evolution of histone H4 and H3 genes in different ciliate lineages. Journal of Molecular Evolution, 46: 344-354.
    • (1998) Journal of Molecular Evolution , vol.46 , pp. 344-354
    • Bernhard, D.1    Schlegel, M.2
  • 8
    • 0035986891 scopus 로고    scopus 로고
    • Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution
    • BIRDSELL, J.A. 2002. Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution. Molecular Biology and Evolution, 19: 1181-1197.
    • (2002) Molecular Biology and Evolution , vol.19 , pp. 1181-1197
    • Birdsell, J.A.1
  • 9
    • 0020327360 scopus 로고
    • Dynamics of concerted evolution of ribosomal DNA and histone gene families in the melanogaster species subgroup of Drosophila
    • COEN, E., STRACHAN, T. & DOVER, G. 1982. Dynamics of concerted evolution of ribosomal DNA and histone gene families in the melanogaster species subgroup of Drosophila. Journal of Molecular Biology, 158: 17-35.
    • (1982) Journal of Molecular Biology , vol.158 , pp. 17-35
    • Coen, E.1    Strachan, T.2    Dover, G.3
  • 10
    • 0034007922 scopus 로고    scopus 로고
    • Gastropod evolutionary rates and phylogenetic relationships assessed using partial 28S rDNA and histone H3 sequences
    • COLGAN, D.J., PONDER, W.F. & EGGLER, P.E. 2000. Gastropod evolutionary rates and phylogenetic relationships assessed using partial 28S rDNA and histone H3 sequences. Zoologica Scripta, 29: 29-63.
    • (2000) Zoologica Scripta , vol.29 , pp. 29-63
    • Colgan, D.J.1    Ponder, W.F.2    Eggler, P.E.3
  • 11
    • 0031975297 scopus 로고    scopus 로고
    • Organization and nucleotide sequence of the cluster of five histone genes in the polychaete worm Chaetopterus variopedatus: First record of a H1 histone gene in the phylum Annelida
    • DEL GAUDIO, R., POTENZA, N., STEFANONI, P., CHIUSANO, M.L. & GERACI, G. 1998. Organization and nucleotide sequence of the cluster of five histone genes in the polychaete worm Chaetopterus variopedatus: first record of a H1 histone gene in the phylum Annelida. Journal of Molecular Evolution, 46: 64-73.
    • (1998) Journal of Molecular Evolution , vol.46 , pp. 64-73
    • Del Gaudio, R.1    Potenza, N.2    Stefanoni, P.3    Chiusano, M.L.4    Geraci, G.5
  • 12
    • 0010027121 scopus 로고
    • Polygyrid relations: A phylogenetic analysis of 17 subfamilies of land snails
    • EMBERTON, K.C. 1991. Polygyrid relations: a phylogenetic analysis of 17 subfamilies of land snails. Zoological Journal of the Linnean Society, 103: 207-224.
    • (1991) Zoological Journal of the Linnean Society , vol.103 , pp. 207-224
    • Emberton, K.C.1
  • 13
    • 0000355369 scopus 로고
    • Comparison of recent classification of stylommatophoran land-snail families, and evaluation of large-ribosomal-RNA sequencing for their phylogenetics
    • EMBERTON, K.C., KUNCIO, G.S., DAVIS, G.M., PHILLIPS, S.M., MONDEREWICZ, K.M. & GUO, Y.H. 1990. Comparison of recent classification of stylommatophoran land-snail families, and evaluation of large-ribosomal-RNA sequencing for their phylogenetics. Malacologia, 31: 327-352.
    • (1990) Malacologia , vol.31 , pp. 327-352
    • Emberton, K.C.1    Kuncio, G.S.2    Davis, G.M.3    Phillips, S.M.4    Monderewicz, K.M.5    Guo, Y.H.6
  • 14
    • 0037303814 scopus 로고    scopus 로고
    • Gene conversion drives GC content evolution in mammalian histones
    • GALTIER, N. 2003. Gene conversion drives GC content evolution in mammalian histones. Trends in Genetics, 19: 65-68.
    • (2003) Trends in Genetics , vol.19 , pp. 65-68
    • Galtier, N.1
  • 15
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogeny
    • HUELSENBECK, J.P. & RONQUIST, F. 2001. MrBayes: Bayesian inference of phylogeny. Biometrics, 17: 754-755.
    • (2001) Biometrics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 16
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences
    • KIMURA, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16: 111-120.
    • (1980) Journal of Molecular Evolution , vol.16 , pp. 111-120
    • Kimura, M.1
  • 18
    • 0004238344 scopus 로고    scopus 로고
    • Oxford University Press, Oxford
    • LEWIN, B. 2000. Genes VII. Oxford University Press, Oxford.
    • (2000) Genes VII
    • Lewin, B.1
  • 19
    • 0033360956 scopus 로고    scopus 로고
    • Concerted evolution: Molecular mechanism and biological implications
    • LIAO, D. 1999. Concerted evolution: molecular mechanism and biological implications. American Journal of Human Genetics, 64: 24-30.
    • (1999) American Journal of Human Genetics , vol.64 , pp. 24-30
    • Liao, D.1
  • 20
    • 0027261105 scopus 로고
    • Nucleotide sequence of the histone gene cluster in the coral Acropora formosa (Cnidaria; Scleractinia): Features of histone gene structure and organization are common to diploblastic and triploblastic metazoans
    • MILLER, D.J., HARRISON, P.L., MAHONY, T.J., MCMILLAN, J.P., MILES, A., ODORICO, D.M. & TEN LOHUIS, M.R. 1993. Nucleotide sequence of the histone gene cluster in the coral Acropora formosa (Cnidaria; Scleractinia): features of histone gene structure and organization are common to diploblastic and triploblastic metazoans. Journal of Molecular Evolution, 37: 245-253.
    • (1993) Journal of Molecular Evolution , vol.37 , pp. 245-253
    • Miller, D.J.1    Harrison, P.L.2    Mahony, T.J.3    Mcmillan, J.P.4    Miles, A.5    Odorico, D.M.6    Ten Lohuis, M.R.7
  • 21
    • 0002532062 scopus 로고
    • The system of the Stylommatophora (Gastropoda), with special regard to the systematic position of the Clausiliidae, I. Importance of the excretory and genital systems
    • NORDSIECK, H. 1985. The system of the Stylommatophora (Gastropoda), with special regard to the systematic position of the Clausiliidae, I. Importance of the excretory and genital systems. Archiv für Molluskenkunde, 116: 1-24.
    • (1985) Archiv für Molluskenkunde , vol.116 , pp. 1-24
    • Nordsieck, H.1
  • 22
    • 0003166866 scopus 로고
    • Phylogeny and system of the Pulmonata (Gastropoda)
    • NORDSIECK, H. 1990. Phylogeny and system of the Pulmonata (Gastropoda). Archiv für Molluskenkunde, 121: 31-52.
    • (1990) Archiv für Molluskenkunde , vol.121 , pp. 31-52
    • Nordsieck, H.1
  • 25
    • 0036094816 scopus 로고    scopus 로고
    • Purifying selection and birth-and-death evolution in the histone H4 gene family
    • PIONTKIVSKA, H., ROONEY, A. & NEI, M. 2002. Purifying selection and birth-and-death evolution in the histone H4 gene family. Molecular Biology and Evolution, 19: 689-697.
    • (2002) Molecular Biology and Evolution , vol.19 , pp. 689-697
    • Piontkivska, H.1    Rooney, A.2    Nei, M.3
  • 26
    • 0005752849 scopus 로고
    • On the mono(?)phyly and classification of the Orthurethra/Pupilloidea (Gastropoda: Pulmonata: Stylommatophora)
    • POKRYSZKO, B. 1994. On the mono(?)phyly and classification of the Orthurethra/Pupilloidea (Gastropoda: Pulmonata: Stylommatophora). Genus, 5: 371-390.
    • (1994) Genus , vol.5 , pp. 371-390
    • Pokryszko, B.1
  • 27
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • POSADA, D. & CRANDALL, K.A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics, 14: 817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 28
    • 0344719420 scopus 로고    scopus 로고
    • Testing the utility of partial COI sequences for phylogenetic estimates of gastropod relationships
    • REMIGIO, E.A. & HEBERT, P.D.N. 2003. Testing the utility of partial COI sequences for phylogenetic estimates of gastropod relationships. Molecular Phylogenetics and Evolution, 29: 641-647.
    • (2003) Molecular Phylogenetics and Evolution , vol.29 , pp. 641-647
    • Remigio, E.A.1    Hebert, P.D.N.2
  • 29
    • 0036135442 scopus 로고    scopus 로고
    • Molecular evolution of the nontandemly repeated genes of the histone 3 multigene family
    • ROONEY, A.P., PIONTKIVSKA, H. & NEI, M. 2002. Molecular evolution of the nontandemly repeated genes of the histone 3 multigene family. Molecular Biology and Evolution, 19: 68-75.
    • (2002) Molecular Biology and Evolution , vol.19 , pp. 68-75
    • Rooney, A.P.1    Piontkivska, H.2    Nei, M.3
  • 30
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • SAITOU, N. & NEI, M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4: 406-425.
    • (1987) Molecular Biology and Evolution , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 31
    • 0037598353 scopus 로고    scopus 로고
    • Treatise on recent terrestrial pulmonate molluscs. Part 1
    • SCHILEYKO, A.A. (1998a). Treatise on recent terrestrial pulmonate molluscs. Part 1. Ruthenica, Suppl. 2: 94-104.
    • (1998) Ruthenica, Suppl. , vol.2 , pp. 94-104
    • Schileyko, A.A.1
  • 32
    • 27144522901 scopus 로고    scopus 로고
    • Treatise on recent terrestrial pulmonate molluscs. Part 2
    • SCHILEYKO, A.A. (1998b). Treatise on recent terrestrial pulmonate molluscs. Part 2. Ruthenica, Suppl. 2: 129-143.
    • (1998) Ruthenica, Suppl. , vol.2 , pp. 129-143
    • Schileyko, A.A.1
  • 34
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X window interlace: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • THOMPSON, J.D., GIBSON, T.J., PLEWNIAK, F., JEANMOUGIN, F. & HIGGINS, D.G. 1997. The Clustal X window interlace: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 24: 4876-4882.
    • (1997) Nucleic Acids Research , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 35
    • 0001832722 scopus 로고
    • Comparative morphology, phylogeny and classification of land slugs and snails (Gastropoda: Pulmonata: Stylommatophora)
    • TILLIER, S. 1989. Comparative morphology, phylogeny and classification of land slugs and snails (Gastropoda: Pulmonata: Stylommatophora). Malacologia, 30: 1-303.
    • (1989) Malacologia , vol.30 , pp. 1-303
    • Tillier, S.1
  • 36
    • 21844497261 scopus 로고
    • The anatomy and systematics of the New Caledonian land snail genus Draparnaudia Montrouzier, 1859 (Pulmonata: Orthurethra)
    • TILLIER, S. & MORDAN, P. 1995. The anatomy and systematics of the New Caledonian land snail genus Draparnaudia Montrouzier, 1859 (Pulmonata: Orthurethra). Zoological Journal of the Linnean Society, 113: 47-91.
    • (1995) Zoological Journal of the Linnean Society , vol.113 , pp. 47-91
    • Tillier, S.1    Mordan, P.2
  • 38
    • 0001936098 scopus 로고    scopus 로고
    • Phylogenetic relationships of the pulmonate gastropods from rRNA sequences, and tempo and age of the stylommatophoran radiation
    • J.D. Taylor, ed., Oxford University Press, Oxford
    • TILLIER, S., MASSELOT, M. & TILLIER, A. 1996. Phylogenetic relationships of the pulmonate gastropods from rRNA sequences, and tempo and age of the stylommatophoran radiation. In: Origin and evolutionary radiation of the Mollusca (J.D. Taylor, ed.), 267-284. Oxford University Press, Oxford.
    • (1996) Origin and Evolutionary Radiation of the Mollusca , pp. 267-284
    • Tillier, S.1    Masselot, M.2    Tillier, A.3
  • 39
    • 0344326700 scopus 로고
    • Biodiversity of the Mollusca: Time for a new approach
    • A.C. van Bruggen, S.M. Wells & T.C.M. Kemperman, eds, Backhuys Publishers, Oegstgeest-Leiden
    • VAN BRUGGEN, A.C. 1995. Biodiversity of the Mollusca: time for a new approach. In: Biodiversity and conservation of the Mollusca (A.C. van Bruggen, S.M. Wells & T.C.M. Kemperman, eds), 1-19. Backhuys Publishers, Oegstgeest-Leiden.
    • (1995) Biodiversity and Conservation of the Mollusca , pp. 1-19
    • Van Bruggen, A.C.1
  • 40
    • 0028509254 scopus 로고
    • TREECON for Windows: A software package for the construction and drawing of evolutionary trees for Microsoft Windows environment
    • VAN DE PEER, Y. & DE WACHTER, R. 1994. TREECON for Windows: a software package for the construction and drawing of evolutionary trees for Microsoft Windows environment. Computer Applications in the Biosciences, 10: 569-570.
    • (1994) Computer Applications in the Biosciences , vol.10 , pp. 569-570
    • Van De Peer, Y.1    De Wachter, R.2
  • 41
    • 0033711097 scopus 로고    scopus 로고
    • Evolution within the gastropod molluscs; using the ribosomal RNA gene-cluster as an indicator of phylogenetic relationships
    • WADE, C.M. & MORDAN, P.E. 2000. Evolution within the gastropod molluscs; using the ribosomal RNA gene-cluster as an indicator of phylogenetic relationships. Journal of Molluscan Studies, 66: 565-570.
    • (2000) Journal of Molluscan Studies , vol.66 , pp. 565-570
    • Wade, C.M.1    Mordan, P.E.2
  • 43
    • 0029810308 scopus 로고    scopus 로고
    • Common features of analogous replacement histone H3 genes in animals and plants
    • WATERBORG, J.H. & ROBERTSON, A.J. 1996. Common features of analogous replacement histone H3 genes in animals and plants. Journal of Molecular Evolution, 43: 194-206.
    • (1996) Journal of Molecular Evolution , vol.43 , pp. 194-206
    • Waterborg, J.H.1    Robertson, A.J.2
  • 44
    • 0024550346 scopus 로고
    • A comprehensive compilation and alignment of histones and histone genes
    • WELLS, D. & MCBRIDE, C. 1989. A comprehensive compilation and alignment of histones and histone genes. Nucleic Acids Research, 17 (Suppl.): r311-r346.
    • (1989) Nucleic Acids Research , vol.17 , Issue.SUPPL.
    • Wells, D.1    Mcbride, C.2
  • 45
    • 0034609292 scopus 로고    scopus 로고
    • Phylogeny of some gastropod mollusks derived from 18S rDNA sequences with emphasis on the Euthyneura
    • YOON, S.H. & KIM, W. 2000. Phylogeny of some gastropod mollusks derived from 18S rDNA sequences with emphasis on the Euthyneura. Nautilus, 114: 84-92.
    • (2000) Nautilus , vol.114 , pp. 84-92
    • Yoon, S.H.1    Kim, W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.