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Volumn 46, Issue 1, 1998, Pages 64-73

Organization and nucleotide sequence of the cluster of five histone genes in the polichaete worm Chaetopterus variopedatus: First record of a H1 histone gene in the phylum annelida

Author keywords

Annelida; C. variopedatus; H1 gene; Histone gene cluster; mRNA double termination signal; Nucleotide sequence; Phylogenesis; Polychaete

Indexed keywords

DNA; HISTONE H1; MESSENGER RNA; NUCLEOTIDE;

EID: 0031975297     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/PL00006284     Document Type: Article
Times cited : (25)

References (44)
  • 1
    • 0031051014 scopus 로고    scopus 로고
    • Two types of polyadenylated mRNAs are synthesized from Drosophila replication-dependent histone genes
    • Akhmanova A, Miedema K, Kremer H, Hennig W (1997) Two types of polyadenylated mRNAs are synthesized from Drosophila replication-dependent histone genes. Eur J Biochem 244:294-300
    • (1997) Eur J Biochem , vol.244 , pp. 294-300
    • Akhmanova, A.1    Miedema, K.2    Kremer, H.3    Hennig, W.4
  • 2
    • 0025879626 scopus 로고
    • Isolation and characterization of two human H1 histone genes within clusters of core histone genes
    • Albig W, Kardalinou E, Drabent B, Zimmer A, Doenecke D (1991) Isolation and characterization of two human H1 histone genes within clusters of core histone genes. Genomics 10:940-948
    • (1991) Genomics , vol.10 , pp. 940-948
    • Albig, W.1    Kardalinou, E.2    Drabent, B.3    Zimmer, A.4    Doenecke, D.5
  • 3
    • 0022404574 scopus 로고
    • Simultaneous expression of early and late histone messenger RNAs in individual cells during development of the sea urchin embryo
    • Angerer L, DeLeon D, Cox K, Maxson R, Kedes L, Kaumeyer J, Weinberg E, Angerer R (1985) Simultaneous expression of early and late histone messenger RNAs in individual cells during development of the sea urchin embryo. Dev Biol 112:157-166
    • (1985) Dev Biol , vol.112 , pp. 157-166
    • Angerer, L.1    DeLeon, D.2    Cox, K.3    Maxson, R.4    Kedes, L.5    Kaumeyer, J.6    Weinberg, E.7    Angerer, R.8
  • 4
    • 0020118435 scopus 로고
    • Generation of authentic 3′ termini of a H2A mRNA in vivo is dependent on a short inverted DNA repeat and on spacer sequences
    • Birchmeier C, Grosschedl R, Birnstiel L (1982) Generation of authentic 3′ termini of a H2A mRNA in vivo is dependent on a short inverted DNA repeat and on spacer sequences. Cell 28:739-745
    • (1982) Cell , vol.28 , pp. 739-745
    • Birchmeier, C.1    Grosschedl, R.2    Birnstiel, L.3
  • 5
    • 0022366770 scopus 로고
    • Transcription termination and 3′ processing: The end is in site!
    • Birnstiel ML, Busslinger M, Strub K (1985) Transcription termination and 3′ processing: the end is in site! Cell 41:349-359
    • (1985) Cell , vol.41 , pp. 349-359
    • Birnstiel, M.L.1    Busslinger, M.2    Strub, K.3
  • 6
    • 0017148259 scopus 로고
    • Isolation of high-molecular-weight DNA
    • Blin N, Stafford DW (1976) Isolation of high-molecular-weight DNA. Nucleic Acids Res 3:2303
    • (1976) Nucleic Acids Res , vol.3 , pp. 2303
    • Blin, N.1    Stafford, D.W.2
  • 8
    • 0018834712 scopus 로고
    • Ubiquitous and gene-specific regulatory 5′ sequences in a sea urchin histone DNA clone coding for histone protein variants
    • Busslinger M, Portmann R, Irminger JC, Birnstiel ML (1980) Ubiquitous and gene-specific regulatory 5′ sequences in a sea urchin histone DNA clone coding for histone protein variants. Nucleic Acids Res 8:957-977
    • (1980) Nucleic Acids Res , vol.8 , pp. 957-977
    • Busslinger, M.1    Portmann, R.2    Irminger, J.C.3    Birnstiel, M.L.4
  • 9
    • 2642682124 scopus 로고
    • Different 3′-end processing produces two independently regulated mRNAs from a single H1 histone gene
    • Cheng G, Nandi A, Clerk S, Skoltchi AI (1989) Different 3′-end processing produces two independently regulated mRNAs from a single H1 histone gene. Proc Natl Acad Sci USA 86:7002-7006
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 7002-7006
    • Cheng, G.1    Nandi, A.2    Clerk, S.3    Skoltchi, A.I.4
  • 10
    • 0021694548 scopus 로고
    • Organization of the histone genes in the rainbow trout (Salmo gairdnerii)
    • Connor W, Mezquita J, Winkfein RJ, States JC, Dixon GH (1984) Organization of the histone genes in the rainbow trout (Salmo gairdnerii). J Mol Evol 20:227-235
    • (1984) J Mol Evol , vol.20 , pp. 227-235
    • Connor, W.1    Mezquita, J.2    Winkfein, R.J.3    States, J.C.4    Dixon, G.H.5
  • 11
    • 0023718158 scopus 로고
    • Histone genes in three sea star species: Cluster arrangement, transcriptional polarity and analyses of the flanking regions of H3 and H4 genes
    • Cool D, Banfield D, Honda BM, Smith MJ (1988) Histone genes in three sea star species: cluster arrangement, transcriptional polarity and analyses of the flanking regions of H3 and H4 genes. J Mol Evol 27:36-44
    • (1988) J Mol Evol , vol.27 , pp. 36-44
    • Cool, D.1    Banfield, D.2    Honda, B.M.3    Smith, M.J.4
  • 12
    • 0026450391 scopus 로고
    • Nucleotide sequence of the Urechis caupo core histone gene tandem repeat
    • Davis FC, Shelton JC, Ingham LD (1992) Nucleotide sequence of the Urechis caupo core histone gene tandem repeat. DNA Seq 2:247-256
    • (1992) DNA Seq , vol.2 , pp. 247-256
    • Davis, F.C.1    Shelton, J.C.2    Ingham, L.D.3
  • 13
    • 0020679970 scopus 로고
    • A H1 histone and a protamine molecule organize the sperm chromatin of the marine worm C. variopedatus
    • De Petrocellis B, Parente A, Tomei L, Geraci G (1983) A H1 histone and a protamine molecule organize the sperm chromatin of the marine worm C. variopedatus. Cell Differ 12:129-135
    • (1983) Cell Differ , vol.12 , pp. 129-135
    • De Petrocellis, B.1    Parente, A.2    Tomei, L.3    Geraci, G.4
  • 14
    • 0019570996 scopus 로고
    • Histone genes are clustered but not tandemly repeated in the chicken genome
    • Engel JD, Dodgson JB (1981) Histone genes are clustered but not tandemly repeated in the chicken genome. Proc Natl Acad Sci USA 78:2856-2860
    • (1981) Proc Natl Acad Sci USA , vol.78 , pp. 2856-2860
    • Engel, J.D.1    Dodgson, J.B.2
  • 15
    • 0000209031 scopus 로고
    • Numerical methods for inferring evolutionary tree
    • Felsenstein J (1982) Numerical methods for inferring evolutionary tree. Q Rev Biol 57:379-404
    • (1982) Q Rev Biol , vol.57 , pp. 379-404
    • Felsenstein, J.1
  • 16
    • 0024152983 scopus 로고
    • Phylogenies from molecular sequences: Inference and reliability
    • Felsenstein J (1988) Phylogenies from molecular sequences: inference and reliability. Annu Rev Genet 22:521-565
    • (1988) Annu Rev Genet , vol.22 , pp. 521-565
    • Felsenstein, J.1
  • 17
    • 0023875830 scopus 로고
    • Purification and characterization of OTF-1, a transcription factor regulating cell cycle expression of a human histone H2B gene
    • Fletcher C, Heintz N, Roeder RG (1987) Purification and characterization of OTF-1, a transcription factor regulating cell cycle expression of a human histone H2B gene. Cell 51:773-781
    • (1987) Cell , vol.51 , pp. 773-781
    • Fletcher, C.1    Heintz, N.2    Roeder, R.G.3
  • 18
    • 0020480813 scopus 로고
    • Independently evolving chicken histone H2B genes: Identification of a ubiquitous H2B-specific 5′ element
    • Harvey RP, Rohins AJ, Wells JR (1982) Independently evolving chicken histone H2B genes: identification of a ubiquitous H2B-specific 5′ element. Nucleic Acids Res 10:7851-7863
    • (1982) Nucleic Acids Res , vol.10 , pp. 7851-7863
    • Harvey, R.P.1    Rohins, A.J.2    Wells, J.R.3
  • 19
    • 0019827286 scopus 로고
    • The organization and expression of histone gene families
    • Hentschel CC, Birnstiel ML (1981) The organization and expression of histone gene families. Cell 25:301-313
    • (1981) Cell , vol.25 , pp. 301-313
    • Hentschel, C.C.1    Birnstiel, M.L.2
  • 20
    • 15444342531 scopus 로고
    • Organization and unusual expression of histone genes in the sea star Pisaster ochraceus
    • Howell AM, Cool D, Hewitt J, Ydenberg B, Smith MJ, Honda BM (1987) Organization and unusual expression of histone genes in the sea star Pisaster ochraceus. J Mol Evol 25:29-36
    • (1987) J Mol Evol , vol.25 , pp. 29-36
    • Howell, A.M.1    Cool, D.2    Hewitt, J.3    Ydenberg, B.4    Smith, M.J.5    Honda, B.M.6
  • 21
    • 0023795503 scopus 로고
    • Cloning and characterization of a core histone gene tandem repeat in Urechis caupo
    • Ingham LD, Davis FC (1988) Cloning and characterization of a core histone gene tandem repeat in Urechis caupo. Mol Cell Biol 8: 4425-4432
    • (1988) Mol Cell Biol , vol.8 , pp. 4425-4432
    • Ingham, L.D.1    Davis, F.C.2
  • 22
    • 0020824452 scopus 로고
    • Primary structure of histone H2A from nucleated erythrocyte of the marine worm Sipunculus nudus. Presence of two forms of H2A in the sipunculid chromatin
    • Kmiecik D, Couppez M, Belaiche D, Sautiere P (1983) Primary structure of histone H2A from nucleated erythrocyte of the marine worm Sipunculus nudus. Presence of two forms of H2A in the sipunculid chromatin. Eur J Biochem 135:113-121
    • (1983) Eur J Biochem , vol.135 , pp. 113-121
    • Kmiecik, D.1    Couppez, M.2    Belaiche, D.3    Sautiere, P.4
  • 23
    • 0025763675 scopus 로고
    • Complete sequence of Sipunculus nudus erythrocyte histone H2B and its gene. Identification of an N,N-dimethylproline residue at the amino-terminus
    • Kmiecik D, Belaiche D, Sautiere P, Loucheux-Lefebvre MH, Kerckaert JP (1991) Complete sequence of Sipunculus nudus erythrocyte histone H2B and its gene. Identification of an N,N-dimethylproline residue at the amino-terminus. Eur J Biochem 198:275-283
    • (1991) Eur J Biochem , vol.198 , pp. 275-283
    • Kmiecik, D.1    Belaiche, D.2    Sautiere, P.3    Loucheux-Lefebvre, M.H.4    Kerckaert, J.P.5
  • 24
    • 0021227288 scopus 로고
    • Formation of the 3′ end of histone mRNA by post-transcriptional processing
    • Krieg PA, Melton DA (1984) Formation of the 3′ end of histone mRNA by post-transcriptional processing. Nature 308:203-206
    • (1984) Nature , vol.308 , pp. 203-206
    • Krieg, P.A.1    Melton, D.A.2
  • 25
    • 0017584322 scopus 로고
    • The organization of the histone genes in Drosophila melanogaster: Functions and evolutionary implication
    • Lifton RP, Goldberg ML, Karp RW, Hogness DS (1977) The organization of the histone genes in Drosophila melanogaster: functions and evolutionary implication. Cold Spring Harb Symp Quant Biol 42:1047-1051
    • (1977) Cold Spring Harb Symp Quant Biol , vol.42 , pp. 1047-1051
    • Lifton, R.P.1    Goldberg, M.L.2    Karp, R.W.3    Hogness, D.S.4
  • 27
    • 0024395794 scopus 로고
    • H2A.X a histone isoprotein with a conserved C-terminal sequence, is encoded by a novel mRNA with both DNA replication type and polya 3′ processing signals
    • Mannironi C, Bonner WM, Hatch CL (1989) H2A.X a histone isoprotein with a conserved C-terminal sequence, is encoded by a novel mRNA with both DNA replication type and polyA 3′ processing signals. Nucleic Acids Res 17:9113-9126
    • (1989) Nucleic Acids Res , vol.17 , pp. 9113-9126
    • Mannironi, C.1    Bonner, W.M.2    Hatch, C.L.3
  • 28
    • 0020993619 scopus 로고
    • Expression and organization of histone genes
    • Maxson R, Cohn R, Kedes L, Mohun T (1983a) Expression and organization of histone genes. Annu Rev Genet 17:239-277
    • (1983) Annu Rev Genet , vol.17 , pp. 239-277
    • Maxson, R.1    Cohn, R.2    Kedes, L.3    Mohun, T.4
  • 29
    • 0020700665 scopus 로고
    • Distinct organizations and patterns of expression of early and late histone gene sets in the sea urchin
    • Maxson R, Mohun T, Gormezano G, Childs G, Kcdes L (1983b) Distinct organizations and patterns of expression of early and late histone gene sets in the sea urchin. Nature 301:120-125
    • (1983) Nature , vol.301 , pp. 120-125
    • Maxson, R.1    Mohun, T.2    Gormezano, G.3    Childs, G.4    Kcdes, L.5
  • 30
    • 0027261105 scopus 로고
    • Nucleotide sequence of the histone gene cluster in the Coral Acropora formosa (Cnidaria; Scleractinia): Features of histone gene structure and organization are common to diploblastic and triploblastic metazoans
    • Miller DJ, Harrison PL, Mahony TJ, McMillan JP, Miles A, Odorico DM, ten Lohuis MR (1993) Nucleotide sequence of the histone gene cluster in the Coral Acropora formosa (Cnidaria; Scleractinia): features of histone gene structure and organization are common to diploblastic and triploblastic metazoans. J Mol Evol 37: 245-253
    • (1993) J Mol Evol , vol.37 , pp. 245-253
    • Miller, D.J.1    Harrison, P.L.2    Mahony, T.J.3    McMillan, J.P.4    Miles, A.5    Odorico, D.M.6    Ten Lohuis, M.R.7
  • 32
    • 0025863511 scopus 로고
    • The regulation of histone synthesis in the cell cycle
    • Osley MA (1991) The regulation of histone synthesis in the cell cycle. Annu Rev Biochem 60:827-861
    • (1991) Annu Rev Biochem , vol.60 , pp. 827-861
    • Osley, M.A.1
  • 33
    • 0023645113 scopus 로고
    • Molecular characterization of the histone gene family of Caenorhabditis elegans
    • Roberts SB, Sanicola M, Emmons SW, Childs G (1987) Molecular characterization of the histone gene family of Caenorhabditis elegans. J Mol Biol 196:27-38
    • (1987) J Mol Biol , vol.196 , pp. 27-38
    • Roberts, S.B.1    Sanicola, M.2    Emmons, S.W.3    Childs, G.4
  • 35
    • 0023375195 scopus 로고
    • The neighbor-joining methods: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining methods: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 36
    • 0023880529 scopus 로고
    • Identification and purification of a human lymphoid-specific octamer-binding protein (OTF-2) that activates transcription of an immunoglobulin promoter in vitro
    • Scheidereit C, Heguy A, Roeder RG (1987) Identification and purification of a human lymphoid-specific octamer-binding protein (OTF-2) that activates transcription of an immunoglobulin promoter in vitro. Cell 51:783-793
    • (1987) Cell , vol.51 , pp. 783-793
    • Scheidereit, C.1    Heguy, A.2    Roeder, R.G.3
  • 37
    • 0022539023 scopus 로고
    • Cell-cycle regulation of histone gene expression
    • Schumperli D (1986) Cell-cycle regulation of histone gene expression. Cell 45:471-472
    • (1986) Cell , vol.45 , pp. 471-472
    • Schumperli, D.1
  • 38
    • 0025371551 scopus 로고
    • Organization and complete nucleotide sequence of the core-histone-gene cluster of the annelid Platynereis dumerilii
    • Sellos D, Krawetz SA, Dixon GH (1990) Organization and complete nucleotide sequence of the core-histone-gene cluster of the annelid Platynereis dumerilii. Eur J Biochem 190:21-29
    • (1990) Eur J Biochem , vol.190 , pp. 21-29
    • Sellos, D.1    Krawetz, S.A.2    Dixon, G.H.3
  • 40
    • 0022800602 scopus 로고
    • Multiple sequences elements are required for maximal in vitro transcription of a human histone H2B gene
    • Sive HL, Heintz N, Roeder RG (1986) Multiple sequences elements are required for maximal in vitro transcription of a human histone H2B gene. Mol Cell Biol 6:3329-3340
    • (1986) Mol Cell Biol , vol.6 , pp. 3329-3340
    • Sive, H.L.1    Heintz, N.2    Roeder, R.G.3
  • 41
    • 0019467225 scopus 로고
    • Characterization of a cloned histone gene cluster of the newt Notophthalmus viridiscens
    • Stephenson EC, Erba HP, Gall JG (1981) Characterization of a cloned histone gene cluster of the newt Notophthalmus viridiscens. Nucleic Acids Res 9:2282-2295
    • (1981) Nucleic Acids Res , vol.9 , pp. 2282-2295
    • Stephenson, E.C.1    Erba, H.P.2    Gall, J.G.3
  • 42
    • 0018987975 scopus 로고
    • Leader sequences of Strongylocentrotus purpuratus histone mRNAs start at a unique heptanucleotide common to all five histone genes
    • Sures I, Levy S, Kedes LH (1980) Leader sequences of Strongylocentrotus purpuratus histone mRNAs start at a unique heptanucleotide common to all five histone genes. Proc Natl Acad Sci USA 77: 1265-1269
    • (1980) Proc Natl Acad Sci USA , vol.77 , pp. 1265-1269
    • Sures, I.1    Levy, S.2    Kedes, L.H.3
  • 43
    • 0027968068 scopus 로고
    • Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 44
    • 0019195487 scopus 로고
    • Xenopus laevis histone gene: Variant H1 genes are present in different clusters
    • Zernik J (1980) Xenopus laevis histone gene: variant H1 genes are present in different clusters. Cell 22:807-815
    • (1980) Cell , vol.22 , pp. 807-815
    • Zernik, J.1


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