Conformational transitions of nongrafted polymers near an absorbing substrate

Physical Review Letters

Volumn 95, Issue 5, 2005, Pages

  Bachmann, Michael ^a   Janke, Wolfhard ^a  

^a UNIVERSITY OF LEIPZIG   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CONFORMATIONAL TRANSITIONS; NONGRAFTED POLYMERS; TRANSITION PATH;

CHEMICAL BONDS; COMPUTER SIMULATION; CONFORMATIONS; PHASE DIAGRAMS; PHASE TRANSITIONS; SUBSTRATES;

POLYMERS;

BIOPOLYMER; PROTEIN; PROTEIN BINDING;

ABSORPTION; ALGORITHM; BINDING SITE; CHEMICAL MODEL; CHEMICAL STRUCTURE; CHEMISTRY; COMPUTER SIMULATION; ELASTICITY; PROTEIN CONFORMATION; ULTRASTRUCTURE;

ABSORPTION; ALGORITHMS; BINDING SITES; BIOPOLYMERS; COMPUTER SIMULATION; ELASTICITY; MODELS, CHEMICAL; MODELS, MOLECULAR; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEINS;

EID: 27144454853     PISSN: 00319007     EISSN: 10797114     Source Type: Journal    
DOI: 10.1103/PhysRevLett.95.058102     Document Type: Article

References (35)

1. M. Rief, H. Clausen-Schaumann, and H. Gaub, Nat. Struct. Biol. NSBIEW 1072-8368 6, 346 (1999). 10.1038/7582
2. D.E. Smith, S. Tans, S. Smith, S. Grimes, D.L. Anderson, and C. Bustamante, Nature (London) NATUAS 0028-0836 413, 748 (2001). 10.1038/35099581
3. J.J. Gray, Curr. Opin. Struct. Biol. 14, 110 (2004). COSBEF 0959-440X 10.1016/j.sbi.2003.12.001
4. E. Nakata, T. Nagase, S. Shinkai, and I. Hamachi, J. Am. Chem. Soc. 126, 490 (2004). JACSAT 0002-7863 10.1021/ja035631i
5. E. Balog, T. Becker, M. Oettl, R. Lechner, R. Daniel, J. Finney, and J.C. Smith, Phys. Rev. Lett. 93, 028103 (2004); PRLTAO 0031-9007 10.1103/PhysRevLett.93.028103
6. M. Ikeguchi, J. Ueno, M. Sato, and A. Kidera, Phys. Rev. Lett. 94, 078102 (2005). PRLTAO 0031-9007 10.1103/PhysRevLett.94.078102
7. J. Forsman and C.E. Woodward, Phys. Rev. Lett. 94, 118301 (2005); PRLTAO 0031-9007 10.1103/PhysRevLett.94.118301
8. G. Reiter, Phys. Rev. Lett. 87, 186101 (2001). PRLTAO 0031-9007 10.1103/PhysRevLett.87.186101
9. T. Bogner, A. Degenhard, and F. Schmid, Phys. Rev. Lett. 93, 268108 (2004). PRLTAO 0031-9007 10.1103/PhysRevLett.93.268108
10. G.M. Foo and R.B. Pandey, Phys. Rev. Lett. 80, 3767 (1998); PRLTAO 0031-9007 10.1103/PhysRevLett.80.3767
11. G.M. Foo R.B. Pandey Phys. Rev. E 61, 1793 (2000). PLEEE8 1063-651X 10.1103/PhysRevE.61.1793
12. R. Hegger and P. Grassberger, J. Phys. A JPHAC5 0305-4470 27, 4069 (1994). 10.1088/0305-4470/27/12/015
13. T. Vrbová and S.G. Whittington, J. Phys. A JPHAC5 0305-4470 29, 6253 (1996); 10.1088/0305-4470/29/19/011
14. T. Vrbová S.G. Whittington J. Phys. A JPHAC5 0305-4470 31, 3989 (1998); 10.1088/0305-4470/31/17/009
15. T. Vrbová and K. Procházka, J. Phys. A JPHAC5 0305-4470 32, 5469 (1999). 10.1088/0305-4470/32/29/307
16. Y. Singh, D. Giri, and S. Kumar, J. Phys. A JPHAC5 0305-4470 34, L67 (2001); 10.1088/0305-4470/34/8/102
17. R. Rajesh, D. Dhar, D. Giri, S. Kumar, and Y. Singh, Phys. Rev. E 65, 056124 (2002). PLEEE8 1063-651X 10.1103/PhysRevE.65.056124
18. M.S. Causo, J. Chem. Phys. 117, 6789 (2002). JCPSA6 0021-9606 10.1063/1.1506306
19. J. Krawczyk, T. Prellberg, A.L. Owczarek, and A. Rechnitzer, Europhys. Lett. EULEEJ 0295-5075 70, 726 (2005). 10.1209/epl/i2004-10524-7
20. J.-H. Huang and S.-J. Han, J. Zhejiang Univ. Sci. ZDXKF6 1008-9497 5, 699 (2004). 10.1631/jzus.2004.0699
21. F. Celestini, T. Frisch, and X. Oyharcabal, Phys. Rev. E 70, 012801 (2004). PLEEE8 1063-651X 10.1103/PhysRevE.70.012801
22. J. Krawczyk, T. Prellberg, A.L. Owczarek, and A. Rechnitzer, J. Stat. Mech. 1742-5468 (2004) P10004. 10.1088/1742-5468/2004/10/P10004
23. P. Benetatos and E. Frey, Phys. Rev. E 70, 051806 (2004). PLEEE8 1063-651X 10.1103/PhysRevE.70.051806
24. M. Breidenreich, R.R. Netz, and R. Lipowsky, Europhys. Lett. 49, 431 (2000); EULEEJ 0295-5075 10.1209/epl/i2000-00167-2
25. M. Breidenreich R.R. Netz R. Lipowsky Eur. Phys. J. E 5, 403 (2001). EPJSFH 1292-8941 10.1007/s101890170047
26. S. Brown, Nat. Biotechnol. NABIF9 1087-0156 15, 269 (1997). 10.1038/nbt0397-269
27. R. Braun, M. Sarikaya, and K. Schulten, J. Biomater. Sci., Polym. Ed. JBSEEA 0920-5063 13, 747 (2002). 10.1163/156856202760197384
28. S.R. Whaley, D.S. English, E.L. Hu, P.F. Barbara, and A.M. Belcher, Nature (London) NATUAS 0028-0836 405, 665 (2000). 10.1038/35015043
29. K. Goede, P. Busch, and M. Grundmann, Nano Lett. NALEFD 1530-6984 4, 2115 (2004). 10.1021/nl048829p
30. N. Gupta and A. Irbäck, J. Chem. Phys. 120, 3983 (2004). JCPSA6 0021-9606 10.1063/1.1643900
31. M. Bachmann and W. Janke, Phys. Rev. Lett. 91, 208105 (2003); PRLTAO 0031-9007 10.1103/PhysRevLett.91.208105
32. M. Bachmann W. Janke J. Chem. Phys. 120, 6779 (2004). JCPSA6 0021-9606 10.1063/1.1651055
33. P. Grassberger, Phys. Rev. E 56, 3682 (1997). PLEEE8 1063-651X 10.1103/PhysRevE.56.3682
34. For a related method, see T. Prellberg and J. Krawczyk, Phys. Rev. Lett. 92, 120602 (2004). PRLTAO 0031-9007 10.1103/PhysRevLett.92.120602
35. M. Bachmann and W. Janke (to be published).