Amyloid fibril formation by the CAD domain of caspase-activated DNase

Biopolymers

Volumn 79, Issue 1, 2005, Pages 39-47

  Uegaki, Koichi ^a   Nakamura, Tsutomu ^a   Yamamoto, Hitoshi ^b   Kobayashi, Atsuko ^a   Odahara, Takayuki ^a   Harata, Kazuaki ^a   Hagihara, Yoshihisa ^a   Ueyama, Norikazu ^b   Yamazaki, Toshio ^c   Yumoto, Noboru ^a  

^a NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^b OSAKA UNIVERSITY   (Japan)

^c RIKEN YOKOHAMA INSTITUTE   (Japan)

Author keywords

Amyloid fibril; Caspase activated DNase; CD; FTIR; X ray fiber diffraction

Indexed keywords

AROMATIC COMPOUNDS; CELL CULTURE; DNA; FABRICATION; FOURIER TRANSFORM INFRARED SPECTROSCOPY; HYDROPHOBICITY; X RAY DIFFRACTION;

AMYLOID FIBRIL; CASPASE-ACTIVATED DNASE; CD; X-RAY FIBER DIFFRACTION;

PROTEINS;

AMYLOID; CASPASE; CASPASE ACTIVATED DEOXYRIBONUCLEASE; DEOXYRIBONUCLEASE; UNCLASSIFIED DRUG;

ALPHA HELIX; AMINO TERMINAL SEQUENCE; ARTICLE; BETA SHEET; CONTROLLED STUDY; ENZYME ACTIVATION; HYDROPHOBICITY; INFRARED SPECTROSCOPY; NONHUMAN; PROTEIN DOMAIN; PROTEIN SECONDARY STRUCTURE; X RAY DIFFRACTION;

AMYLOID; ANIONS; DEOXYRIBONUCLEASES; HYDROGEN-ION CONCENTRATION; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; SPECTROSCOPY, FOURIER TRANSFORM INFRARED; X-RAY DIFFRACTION;

EID: 26844519472     PISSN: 00063525     EISSN: None     Source Type: Journal    
DOI: 10.1002/bip.20327     Document Type: Article

References (36)

1. Kelly, J. W. Curr Opin Struct Biol 1996, 6, 11-17.
2. Kelly, J. W. Curr Opin Struct Biol 1998, 8, 101-106.
3. Sigurdsson, E. M.; Wisniewski, T.; Frangione, B. Trends Mol Med 2002, 8, 411-413.
4. Chiti, F.; Webster, P.; Taddei, N.; Clark, A.; Stefani, M.; Ramponi, G.; Dobson, C. M. Proc Natl Acad Sci USA 1999, 96, 3590-3594.
5. Guijarro, J. I.; Sunde, M.; Jones, J. A.; Campbell, I. D.; Dobson, C. M. Proc Natl Acad Sci U S A 1998, 95, 4224-4228.
6. Gross, M.; Wilkins, D. K.; Pitkeathly, M. C.; Chung, E. W.; Higham, C.; Clark, A.; Dobson, C. M. Protein Sci 1999, 8, 1350-1357.
7. Fezoui, Y.; Hartley, D. M.; Walsh, D. M.; Selkoe, D. J.; Osterhout, J. J.; Teplow, D. B. Nat Struct Biol 2000, 7, 1095-1099.
8. Serpell, L. C.; Sunde, M.; Blake, C. C. Cell Mol Life Sci 1997, 53, 871-887.
9. Sunde, M.; Serpell, L. C.; Bartlam, M.; Fraser, P. E.; Pepys, M. B.; Blake, C. C. J Mol Biol 1997, 273, 729-739.
10. Missmakl, H. P. Amyloidosis; Excerpta Media: Amsterdam, 1968.
11. Sunde, M.; Blake, C. Adv Protein Chem 1997, 50, 123-159.
12. Shirahama, T.; Cohen, A. S. J Cell Biol 1967, 33, 679-708.
13. Bousset, L.; Thomson, N. H.; Radford, S. E.; Melki, R. Embo J 2002, 21, 2903-2911.
14. Sadqi, M.; Hernandez, F.; Pan, U.; Perez, M.; Schaberle, M. D.; Avila, J.; Munoz, V. Biochemistry 2002, 41, 7150-7155.
15. Sakahira, H.; Enari, M.; Nagata, S. Nature 1998, 391, 96-99.
16. Otomo, T.; Sakahira, H.; Uegaki, K.; Nagata, S.; Yamazaki, T. Nat Struct Biol 2000, 7, 658-662.
17. Uegaki, K.; Otomo, T.; Sakahira, H.; Shimizu, M.; Yumoto, N.; Kyogoku, Y.; Nagata, S.; Yamazaki, T. J Mol Biol 2000, 297, 1121-1128.
18. Orengo, C. A.; Jones, D. T.; Thornton, J. M. Nature 1994, 372, 631-634.
19. Edelhoch, H. Biochemistry 1967, 6, 1948-1954.
20. Greenfield, N. J. Anal Biochem 1996, 235, 1-10.
21. Bouchard, M.; Zurdo, J.; Nettleton, E. J.; Dobson, C. M.; Robinson, C. V. Protein Sci 2000, 9, 1960-1967.
22. Seshadri, S.; Khurana, R.; Fink, A. L. Methods Enzymol 1999, 309, 559-576.
23. Gasset, M.; Baldwin, M. A.; Fletterick, R. J.; Prusiner, S. B. Proc Natl Acad Sci U S A 1993, 90, 1-5.
24. Susi, H.; Byler, D. M. Methods Enzymol 1986, 130, 290-311.
25. Naiki, H.; Higuchi, K.; Hosokawa, M.; Takeda, T. Anal Biochem 1989, 177, 244-249.
26. Kelly, J. W. Nat Struct Biol 2000, 7, 824-826.
27. Serpell, L. C.; Fraser, P. E.; Sunde, M. Methods Enzymol 1999, 309, 526-536.
28. Pauling, L.; Corey, R. B. Proc Natl Acad Sci USA 1951, 37, 235-240.
29. Goto, Y.; Takahashi, N.; Fink, A. L. Biochemistry 1990, 29, 3480-3488.
30. Goto, Y.; Aimoto, S. J Mol Biol 1991, 218, 387-396.
31. Goto, Y.; Hagihara, Y. Biochemistry 1992, 31, 732-738.
32. McParland, V. J.; Kad, N. M.; Kalverda, A. P.; Brown, A.; Kirwin-Jones, P.; Hunter, M. G.; Sunde, M.; Radford, S. E. Biochemistry 2000, 39, 8735-8746.
33. Yutani, K.; Takayama, G.; Goda, S.; Yamagata, Y.; Maki, S.; Namba, K.; Tsunasawa, S.; Ogasahara, K. Biochemistry 2000, 39, 2769-2777.
34. Khurana, R.; Gillespie, J. R.; Talapatra, A.; Minert, L. J.; Ionescu-Zanetti, C.; Millett, I.; Fink, A. L. Biochemistry 2001, 40, 3525-3535.
35. Booth, D. R.; Sunde, M.; Bellotti, V.; Robinson, C. V.; Hutchinson, W. L.; Fraser, P. E.; Hawkins, P. N.; Dobson, C. M.; Radford, S. E.; Blake, C. C.; Pepys, M. B. Nature 1997, 385, 787-793.
36. Guijarro, J. I.; Sunde, M.; Jones, J. A.; Campbell, I. D.; Dobson, C. M. Proc Natl Acad Sci U S A 1998, 95, 4224-4228.