Methods to estimate the conformation of proteins and polypeptides from circular dichroism data

Analytical Biochemistry

Volumn 235, Issue 1, 1996, Pages 1-10

  Greenfield, Norma J ^a  

^a RUTGERS ROBERT WOOD JOHNSON MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DATA ACQUISITION; DICHROISM;

ADVANTAGES AND PITFALLS; CIRCULAR DICHROISM DATA; COMPUTER RESOURCES; DETERMINATION OF PROTEINS; PROTEIN CONCENTRATIONS; STRUCTURAL INFORMATION; WAVELENGTH RANGES;

PROTEINS;

CIRCULAR DICHROISM; DIAGNOSTIC ACCURACY; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN DETERMINATION; REVIEW; STRUCTURE ANALYSIS;

EID: 0030042763     PISSN: 00032697     EISSN: None     Source Type: Journal    
DOI: 10.1006/abio.1996.0084     Document Type: Review

References (44)

1. Adler, A. J., Greenfield, N. J., and Fasman, G. D. (1972) Methods. Enzymol. 27, 675-735.
2. Woody, R. W. (1985) Peptides 7, 15-114.
3. Yang, J. T., Wu, C-S. C., and Martinez, H. M. (1986) Methods Enzymol. 130, 208-269.
4. Johnson, W. C., Jr. (1985) Methods Biochem. Anal. 31, 61-163.
5. Johnson, W. C., Jr. (1988) Annu. Rev. Biophys. Chem. 17, 145-166.
6. Johnson, W. C., Jr. (1990) Proteins Struct. Funct. Genet. 7, 205-214.
7. Woody, R. W. (1992) Adv. Biophys. Chem. 2, 37-79.
8. Sreerama, N., and Woody, R. W. (1993) Anal. Biochem. 209, 32-44.
9. Tourmadje, A., Alcorn, S. W., and Johnson, W. C., Jr. (1992) Anal. Biochem. 200, 321-331.
10. Bradford, M. M. (1976) Anal. Biochem. 72, 248-254.
11. Goa, J. (1953) Scand. J. Clin. Lab. Invest. 5, 218-222.
12. Lang, C. A. (1958) Anal. Chem. 30, 1692-1694.
13. Edelhoch, H. (1967) Biochemistry 6, 1948-1954.
14. Gill, S. C., and von Hipple, P. H. (1989) Anal. Biochem. 182, 319-326.
15. Greenfield, N., and Fasman, G. D. (1969) Biochemistry 8, 4108-4116.
16. Saxena, V. P., and Wetlaufer, D. B. (1971) Proc. Natl. Acad. Sci. USA 68, 969-972.
17. Chen, Y-H., and Yang, J. T. (1971) Biochem. Biophys. Res. Commun. 44, 1285-1291.
18. Chang, C. T., Wu, C-S. C., and Yang, J. T. (1978) Anal. Biochem. 91, 13-31.
19. Brahms, S., and Brahms, J. (1980) J. Mol. Biol. 138, 149-178.
20. Hennessey, J. P., and Johnson, W. C., Jr. (1981) Biochemistry 20, 1085-1094.
21. Manavalan, P., and Johnson, W. C., Jr. (1987). Anal. Biochem. 167, 76-85.
22. Provencher, S. W., and Glöckner, J. (1981) Biochemistry 20, 33-37.
23. Perczel, A., Hollósi, M., Tusnády, G., and Fasman, G. D. (1991) Protein Eng. 4, 669-679.
24. Perczel, A., Park, K., and Fasman, G. D. (1992) Proteins Struct. Funct. Genet. 13, 57-69.
25. Perczel, A., Park, K., and Fasman, G. D. (1992) Anal. Biochem. 203, 83-93.
26. Böhm, G., Muhr, R., and Jaenicke, R. (1992) Protein Eng. 5, 191-195.
27. Andrade, M. A., Chacón, P., Merolo, J. J., and Morán, F. (1993) Protein Eng. 6, 383-390.
28. Merolo, J. J., Andrade, M. A., Prieto, A., and Morán, F. (1994) Neurocomputing 6, 443-454.
29. Sreerama, N., and Woody, R. W. (1994) Biochemistry 33, 10022-10025.
30. Sreerama, N., and Woody, R. W. (1994) J. Mol. Biol. 242, 497-507.
31. Kabsch, W., and Sander, C. (1983) Biopolymers 22, 2577-2637.
32. Levitt, M., and Greer, J. (1977) J. Mol. Biol. 114, 181-293.
33. Scholtz, J. M., Qian, H., York, E. J., Stewart, J. M., and Baldwin, R. L. (1991) Biopolymers 31, 1463-1470.
34. Chakrabartty, A., Kortemme, T., Padmanabhan, S., and Baldwin, R. L. (1993) Biochemistry 32, 5560-5565.
35. Bolotina, I. A., and Lugauskas, V. Y. (1986) Mol. Biol. 19, 1154-1166.
36. Woody, R. W. (1974) in Peptides, Polypeptides and Proteins (Blout, E. R., Bovey, F. A., Goodman, M., and Lotan, N., Eds.), pp. 338-360, Wiley, New York.
37. Perczel, A., and Fasman, G. D. (1992) Protein Sci. 1, 378-395.
38. Venyaminov, S. Y., Baikalov, K. A., Wu, C-S. C., and Yang, J. T. (1991) Anal. Biochem. 198, 250-255.
39. Venyaminov, S. Y., Baikalov, I. A., Shen, Z. M., Wu, C-S. C., and Yang, J. T.(1993) Anal. Biochem. 214, 17-24.
40. van Stokkum, I. H. M., Spoelder, H. J. W., Bloemendal, M., van Grondelle, R., and Groen, F. C. A. (1990) Anal. Biochem. 191, 110-118.
41. Hirst, J. D., and Sternberg, M. J. E. (1992) Biochemistry 31, 7211-7218.
42. Manavalan, P., and Johnson, W. C., Jr. (1983) Nature 305, 831-832.
43. Venyaminov, S. Y., and Vassilenko, K. S. (1994) Anal. Biochem. 222, 176-184.
44. Levitt, M., and Chothia, C. (1976) Nature 261, 552-558.