메뉴 건너뛰기




Volumn 3578, Issue , 2005, Pages 462-469

Protein fold recognition using neural networks and support vector machines

Author keywords

[No Author keywords available]

Indexed keywords

MAPPING; MATHEMATICAL MODELS; NEURAL NETWORKS; POTENTIAL ENERGY;

EID: 26444620063     PISSN: 03029743     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1007/11508069_60     Document Type: Conference Paper
Times cited : (1)

References (16)
  • 1
    • 0026458378 scopus 로고
    • Amino-acid substitution matrices from protein blocks
    • Henikoff, S. and Henikoff, J. G.: Amino-acid substitution matrices from protein blocks. Proc. Natl. Acad. Sci. USA., 89(22): 10915-10919. (1992)
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , Issue.22 , pp. 10915-10919
    • Henikoff, S.1    Henikoff, J.G.2
  • 2
    • 0035967880 scopus 로고    scopus 로고
    • FUGUE: Sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties
    • Shi, J., Blundell, T. L. and Mizuguchi, K.: FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties. J. Mol Biol., 310:243-257. (2001)
    • (2001) J. Mol Biol. , vol.310 , pp. 243-257
    • Shi, J.1    Blundell, T.L.2    Mizuguchi, K.3
  • 3
    • 0034595501 scopus 로고    scopus 로고
    • Enhanced genome annotation using structural profiles in the program 3D-PSSM
    • Kelley, L. A., MacCallum, R. M. and Sternberg, M. J.: Enhanced Genome Annotation using Structural Profiles in the Program 3D-PSSM. J. Mol. Biol., 299(2): 501-522. (2000)
    • (2000) J. Mol. Biol. , vol.299 , Issue.2 , pp. 501-522
    • Kelley, L.A.1    MacCallum, R.M.2    Sternberg, M.J.3
  • 6
    • 0035014847 scopus 로고    scopus 로고
    • Multi-class protein fold recognition using support vector machines and neural networks
    • Ding, C. and Dubchak, I.: Multi-class protein fold recognition using support vector machines and neural networks. Bioinformatics, 17:349-358. (2001)
    • (2001) Bioinformatics , vol.17 , pp. 349-358
    • Ding, C.1    Dubchak, I.2
  • 9
    • 0036084625 scopus 로고    scopus 로고
    • SCOP database in 2002: Refinements accommodate structural genomics
    • Lo Conte, L., Brenner, S. E., Hubbard, T. J. P. et al.: SCOP database in 2002: refinements accommodate structural genomics. Nucl. Acids. Res., 30(1): 264-267. (2002)
    • (2002) Nucl. Acids. Res. , vol.30 , Issue.1 , pp. 264-267
    • Lo Conte, L.1    Brenner, S.E.2    Hubbard, T.J.P.3
  • 10
    • 0037433756 scopus 로고    scopus 로고
    • Protein structure comparison by probability-based matching of secondary structure elements
    • Shih, E. S. C. and Hwang, M. J.: Protein structure comparison by probability-based matching of secondary structure elements. Bioinformatics, 19:735-741. (2003)
    • (2003) Bioinformatics , vol.19 , pp. 735-741
    • Shih, E.S.C.1    Hwang, M.J.2
  • 13
    • 0033537993 scopus 로고    scopus 로고
    • GenTHREADER: An efficient and reliable protein fold recognition method for genomic sequences
    • Jones, D. T.: GenTHREADER: An efficient and Reliable Protein Fold recognition Method for Genomic Sequences. J. Mol. Biol., 287:797-815. (1999)
    • (1999) J. Mol. Biol. , vol.287 , pp. 797-815
    • Jones, D.T.1
  • 14
    • 0036012371 scopus 로고    scopus 로고
    • A practical method for interpretation of threading scores: An application of neural networks
    • Xu, Y., Xu, D. and Olman, V.: A practical method for interpretation of threading scores: an application of neural networks. Statistical Sinica Special Issue on Bioinformatics, 12, 159-177.(2002)
    • (2002) Statistical Sinica Special Issue on Bioinformatics , vol.12 , pp. 159-177
    • Xu, Y.1    Xu, D.2    Olman, V.3
  • 15
    • 2542631929 scopus 로고    scopus 로고
    • Single-body residue-level knowledge-based energy score combined with sequence-profile and secondary structure information for fold recognition
    • Zhou, H. and Zhou, Y.: Single-body residue-level knowledge-based energy score combined with sequence-profile and secondary structure information for fold recognition. Proteins, 55:1005-1013. (2004)
    • (2004) Proteins , vol.55 , pp. 1005-1013
    • Zhou, H.1    Zhou, Y.2
  • 16
    • 0345827718 scopus 로고    scopus 로고
    • Using evolutionary information for query and target improves fold recognition
    • Wallner, B. Fang, H. Ohlson, T. Frey-skott, J. and Elofsson, A.: Using evolutionary information for query and target improves fold recognition. Proteins, 54:342-350. (2004)
    • (2004) Proteins , vol.54 , pp. 342-350
    • Fang, W.B.1    Ohlson, H.2    Frey-Skott, T.J.3    Elofsson, A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.