-
1
-
-
0026458378
-
Amino-acid substitution matrices from protein blocks
-
Henikoff, S. and Henikoff, J. G.: Amino-acid substitution matrices from protein blocks. Proc. Natl. Acad. Sci. USA., 89(22): 10915-10919. (1992)
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, Issue.22
, pp. 10915-10919
-
-
Henikoff, S.1
Henikoff, J.G.2
-
2
-
-
0035967880
-
FUGUE: Sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties
-
Shi, J., Blundell, T. L. and Mizuguchi, K.: FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties. J. Mol Biol., 310:243-257. (2001)
-
(2001)
J. Mol Biol.
, vol.310
, pp. 243-257
-
-
Shi, J.1
Blundell, T.L.2
Mizuguchi, K.3
-
3
-
-
0034595501
-
Enhanced genome annotation using structural profiles in the program 3D-PSSM
-
Kelley, L. A., MacCallum, R. M. and Sternberg, M. J.: Enhanced Genome Annotation using Structural Profiles in the Program 3D-PSSM. J. Mol. Biol., 299(2): 501-522. (2000)
-
(2000)
J. Mol. Biol.
, vol.299
, Issue.2
, pp. 501-522
-
-
Kelley, L.A.1
MacCallum, R.M.2
Sternberg, M.J.3
-
6
-
-
0035014847
-
Multi-class protein fold recognition using support vector machines and neural networks
-
Ding, C. and Dubchak, I.: Multi-class protein fold recognition using support vector machines and neural networks. Bioinformatics, 17:349-358. (2001)
-
(2001)
Bioinformatics
, vol.17
, pp. 349-358
-
-
Ding, C.1
Dubchak, I.2
-
9
-
-
0036084625
-
SCOP database in 2002: Refinements accommodate structural genomics
-
Lo Conte, L., Brenner, S. E., Hubbard, T. J. P. et al.: SCOP database in 2002: refinements accommodate structural genomics. Nucl. Acids. Res., 30(1): 264-267. (2002)
-
(2002)
Nucl. Acids. Res.
, vol.30
, Issue.1
, pp. 264-267
-
-
Lo Conte, L.1
Brenner, S.E.2
Hubbard, T.J.P.3
-
10
-
-
0037433756
-
Protein structure comparison by probability-based matching of secondary structure elements
-
Shih, E. S. C. and Hwang, M. J.: Protein structure comparison by probability-based matching of secondary structure elements. Bioinformatics, 19:735-741. (2003)
-
(2003)
Bioinformatics
, vol.19
, pp. 735-741
-
-
Shih, E.S.C.1
Hwang, M.J.2
-
11
-
-
0030310317
-
Assessing the performance of fold recognition methods by means of a comprehensive benchmark
-
Fischer, D., Elofsson, A., Rice, D. W. et al.: Assessing the performance of fold recognition methods by means of a comprehensive benchmark. Proceedings of the Pacific Symposium on Biocomputing, 300-318. (1996)
-
(1996)
Proceedings of the Pacific Symposium on Biocomputing
, pp. 300-318
-
-
Fischer, D.1
Elofsson, A.2
Rice, D.W.3
-
13
-
-
0033537993
-
GenTHREADER: An efficient and reliable protein fold recognition method for genomic sequences
-
Jones, D. T.: GenTHREADER: An efficient and Reliable Protein Fold recognition Method for Genomic Sequences. J. Mol. Biol., 287:797-815. (1999)
-
(1999)
J. Mol. Biol.
, vol.287
, pp. 797-815
-
-
Jones, D.T.1
-
14
-
-
0036012371
-
A practical method for interpretation of threading scores: An application of neural networks
-
Xu, Y., Xu, D. and Olman, V.: A practical method for interpretation of threading scores: an application of neural networks. Statistical Sinica Special Issue on Bioinformatics, 12, 159-177.(2002)
-
(2002)
Statistical Sinica Special Issue on Bioinformatics
, vol.12
, pp. 159-177
-
-
Xu, Y.1
Xu, D.2
Olman, V.3
-
15
-
-
2542631929
-
Single-body residue-level knowledge-based energy score combined with sequence-profile and secondary structure information for fold recognition
-
Zhou, H. and Zhou, Y.: Single-body residue-level knowledge-based energy score combined with sequence-profile and secondary structure information for fold recognition. Proteins, 55:1005-1013. (2004)
-
(2004)
Proteins
, vol.55
, pp. 1005-1013
-
-
Zhou, H.1
Zhou, Y.2
-
16
-
-
0345827718
-
Using evolutionary information for query and target improves fold recognition
-
Wallner, B. Fang, H. Ohlson, T. Frey-skott, J. and Elofsson, A.: Using evolutionary information for query and target improves fold recognition. Proteins, 54:342-350. (2004)
-
(2004)
Proteins
, vol.54
, pp. 342-350
-
-
Fang, W.B.1
Ohlson, H.2
Frey-Skott, T.J.3
Elofsson, A.4
|