메뉴 건너뛰기




Volumn 79, Issue 20, 2005, Pages 12905-12913

Structural genomics of the severe acute respiratory syndrome coronavirus: Nuclear magnetic resonance structure of the protein nsP7

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN NSP7; UNCLASSIFIED DRUG; VIRUS PROTEIN;

EID: 26444459785     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.79.20.12905-12913.2005     Document Type: Article
Times cited : (53)

References (44)
  • 1
    • 0033831421 scopus 로고    scopus 로고
    • Viral mechanisms of immune evasion
    • Alcami, A., and U. H. Koszinowski. 2000. Viral mechanisms of immune evasion, Immunol. Today 21:447-455.
    • (2000) Immunol. Today , vol.21 , pp. 447-455
    • Alcami, A.1    Koszinowski, U.H.2
  • 2
    • 0034054288 scopus 로고    scopus 로고
    • Four proteins processed from the replicase gene polyprotein of mouse hepatitis virus colocalize in the cell periphery and adjacent to sites of virion assembly
    • Bost, A. G., R. H. Carnahan, X. T. Lu, and M. R. Denison. 2000. Four proteins processed from the replicase gene polyprotein of mouse hepatitis virus colocalize in the cell periphery and adjacent to sites of virion assembly. J. Virol. 74:3379-3387.
    • (2000) J. Virol. , vol.74 , pp. 3379-3387
    • Bost, A.G.1    Carnahan, R.H.2    Lu, X.T.3    Denison, M.R.4
  • 3
    • 4344572988 scopus 로고    scopus 로고
    • Viral appropriation of apoptotic and NF-κB signaling pathways
    • Bowie, A. G., J. Zhan, and W. L. Marshall. 2004. Viral appropriation of apoptotic and NF-κB signaling pathways. J. Cell. Biochem. 91:1099-1108.
    • (2004) J. Cell. Biochem. , vol.91 , pp. 1099-1108
    • Bowie, A.G.1    Zhan, J.2    Marshall, W.L.3
  • 4
    • 6344221938 scopus 로고    scopus 로고
    • Intracellular localization and protein interactions of the gene 1 protein p28 during mouse hepatitis virus replication
    • Brockway, S. M., X. T. Lu, T. R. Peters, T. S. Dermody, and M. R. Denison. 2004. Intracellular localization and protein interactions of the gene 1 protein p28 during mouse hepatitis virus replication. J. Virol. 78:11551-11562.
    • (2004) J. Virol. , vol.78 , pp. 11551-11562
    • Brockway, S.M.1    Lu, X.T.2    Peters, T.R.3    Dermody, T.S.4    Denison, M.R.5
  • 6
    • 2542445427 scopus 로고    scopus 로고
    • ConSurf: Identification of functional regions in proteins by surface-mapping of phylogenetic information
    • Glaser, F., T. Pupko, I. Paz, R. E. Bell, D. Bechor-Shental, E. Martz, and N. Ben-Tal. 2003. ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information. Bioinformatics 19:163-164.
    • (2003) Bioinformatics , vol.19 , pp. 163-164
    • Glaser, F.1    Pupko, T.2    Paz, I.3    Bell, R.E.4    Bechor-Shental, D.5    Martz, E.6    Ben-Tal, N.7
  • 7
    • 0031714689 scopus 로고    scopus 로고
    • Structure calculation of biological macromolecules from NMR data
    • Güntert, P. 1998. Structure calculation of biological macromolecules from NMR data. Q. Rev. Biophys. 31:145-237.
    • (1998) Q. Rev. Biophys. , vol.31 , pp. 145-237
    • Güntert, P.1
  • 8
    • 0035425696 scopus 로고    scopus 로고
    • Sampling of conformation space in torsion angle dynamics calculations
    • Güntert, P., and K. Wüthrich. 2001. Sampling of conformation space in torsion angle dynamics calculations. Comp. Phys. Commun. 138:155-169.
    • (2001) Comp. Phys. Commun. , vol.138 , pp. 155-169
    • Güntert, P.1    Wüthrich, K.2
  • 9
    • 0031576336 scopus 로고    scopus 로고
    • Torsion angle dynamics for NMR structure calculation with the new program DYANA
    • Güntert, P., C. Mumenthaler, and K. Wüthrich. 1997. Torsion angle dynamics for NMR structure calculation with the new program DYANA. J. Mol. Biol. 273:283-298.
    • (1997) J. Mol. Biol. , vol.273 , pp. 283-298
    • Güntert, P.1    Mumenthaler, C.2    Wüthrich, K.3
  • 10
    • 0036308102 scopus 로고    scopus 로고
    • Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA
    • Herrmann, T., P. Güntert, and K. Wüthrich. 2002. Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA. J. Mol. Biol. 319:209-227.
    • (2002) J. Mol. Biol. , vol.319 , pp. 209-227
    • Herrmann, T.1    Güntert, P.2    Wüthrich, K.3
  • 11
    • 0036873589 scopus 로고    scopus 로고
    • Protein NMR structure determination with automated NOE-identification in NOESY spectra using the new software ATNOS
    • Herrmann, T., P. Güntert, and K. Wüthrich. 2002. Protein NMR structure determination with automated NOE-identification in NOESY spectra using the new software ATNOS. J. Biomol. NMR 24:171-189.
    • (2002) J. Biomol. NMR , vol.24 , pp. 171-189
    • Herrmann, T.1    Güntert, P.2    Wüthrich, K.3
  • 12
    • 0027440362 scopus 로고
    • Protein structure comparison by alignment of distance matrices
    • Holm, L., and C. Sander. 1993. Protein structure comparison by alignment of distance matrices. J. Mol. Biol. 233:123-138.
    • (1993) J. Mol. Biol. , vol.233 , pp. 123-138
    • Holm, L.1    Sander, C.2
  • 13
    • 2442679084 scopus 로고    scopus 로고
    • Multiple enzymatic activities associated with severe acute respiratory syndrome coronavirus helicase
    • Ivanov, K. A., V. Thiel, J. C. Dobbe, Y. van der Meer, E. J. Snijder, and J. Ziebuhr. 2004. Multiple enzymatic activities associated with severe acute respiratory syndrome coronavirus helicase. J. Virol. 78:5619-5632.
    • (2004) J. Virol. , vol.78 , pp. 5619-5632
    • Ivanov, K.A.1    Thiel, V.2    Dobbe, J.C.3    Van Der Meer, Y.4    Snijder, E.J.5    Ziebuhr, J.6
  • 14
    • 0034140558 scopus 로고    scopus 로고
    • Point-centered domain decomposition for parallel molecular dynamics simulation
    • Koradi, R., M. Billeter, and P. Güntert. 2000. Point-centered domain decomposition for parallel molecular dynamics simulation. Comp. Phys. Commun. 124:139-147.
    • (2000) Comp. Phys. Commun. , vol.124 , pp. 139-147
    • Koradi, R.1    Billeter, M.2    Güntert, P.3
  • 15
    • 0029881007 scopus 로고    scopus 로고
    • MOLMOL: A program for display and analysis of macromolecular structures
    • Koradi, R., M. Billeter, and K. Wüthrich. 1996. MOLMOL: a program for display and analysis of macromolecular structures. J. Mol. Graphics 14:51-55.
    • (1996) J. Mol. Graphics , vol.14 , pp. 51-55
    • Koradi, R.1    Billeter, M.2    Wüthrich, K.3
  • 18
    • 0030236215 scopus 로고    scopus 로고
    • The new program OPAL for molecular dynamics simulations and energy refinements of biological macromolecules
    • Luginbühl, P., P. Güntert, M. Billeter, and K. Wüthrich. 1996. The new program OPAL for molecular dynamics simulations and energy refinements of biological macromolecules. J. Biomol. NMR 8:136-146.
    • (1996) J. Biomol. NMR , vol.8 , pp. 136-146
    • Luginbühl, P.1    Güntert, P.2    Billeter, M.3    Wüthrich, K.4
  • 21
    • 0028961335 scopus 로고
    • SCOP: A structural classification of proteins database for the investigation of sequences and structures
    • Murzin, A. G., S. E. Brenner, T. Hubbard, and C. Chothia. 1995. SCOP: a structural classification of proteins database for the investigation of sequences and structures. J. Mol. Biol. 247:536-540.
    • (1995) J. Mol. Biol. , vol.247 , pp. 536-540
    • Murzin, A.G.1    Brenner, S.E.2    Hubbard, T.3    Chothia, C.4
  • 22
    • 0037384952 scopus 로고    scopus 로고
    • Murine coronavirus-induced hepatitis: JHM genetic background eliminates A59 spike-determined hepatotropism
    • Navas, S., and S. R. Weiss. 2003. Murine coronavirus-induced hepatitis: JHM genetic background eliminates A59 spike-determined hepatotropism. J. Virol. 77:4972-4978.
    • (2003) J. Virol. , vol.77 , pp. 4972-4978
    • Navas, S.1    Weiss, S.R.2
  • 23
    • 0035699445 scopus 로고    scopus 로고
    • Further identification and characterization of products processed from the coronavirus avian infectious bronchitis virus (IBV) 1a polyprotein by the 3C-like proteinase
    • Ng, L. F. P., H. Y. Xu, and D. X. Liu. 2001. Further identification and characterization of products processed from the coronavirus avian infectious bronchitis virus (IBV) 1a polyprotein by the 3C-like proteinase. Adv. Exp. Med. Biol. 494:291-298.
    • (2001) Adv. Exp. Med. Biol. , vol.494 , pp. 291-298
    • Ng, L.F.P.1    Xu, H.Y.2    Liu, D.X.3
  • 24
    • 0030635055 scopus 로고    scopus 로고
    • Ambiguous distance data in the calculation of NMR structures
    • Nilges, M. 1997. Ambiguous distance data in the calculation of NMR structures. Folding Design 2:S53-S57.
    • (1997) Folding Design , vol.2
    • Nilges, M.1
  • 27
    • 0026331267 scopus 로고
    • X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil
    • O'Shea, E. K., J. D. Klemm, P. S. Kim, and T. Alber. 1991. X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil. Science 254:539-544.
    • (1991) Science , vol.254 , pp. 539-544
    • O'Shea, E.K.1    Klemm, J.D.2    Kim, P.S.3    Alber, T.4
  • 29
    • 13844311014 scopus 로고    scopus 로고
    • NMR screening and crystal quality of bacterially expressed prokaryotic and eukaryotic proteins in a structural genomics pipeline
    • Page, R., W. Peti, I. A. Wilson, R. C. Stevens, and K. Wüthrich. 2005. NMR screening and crystal quality of bacterially expressed prokaryotic and eukaryotic proteins in a structural genomics pipeline. Proc. Natl. Acad. Sci. USA 102:1901-1905.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 1901-1905
    • Page, R.1    Peti, W.2    Wilson, I.A.3    Stevens, R.C.4    Wüthrich, K.5
  • 31
    • 4444246734 scopus 로고    scopus 로고
    • Identification and characterization of severe acute respiratory syndrome coronavirus replicase proteins
    • Prentice, E., J. McAuliffe, X. Lu, K. Subbarao, and M. R. Denison. 2004. Identification and characterization of severe acute respiratory syndrome coronavirus replicase proteins. J. Virol. 78:9977-9986.
    • (2004) J. Virol. , vol.78 , pp. 9977-9986
    • Prentice, E.1    McAuliffe, J.2    Lu, X.3    Subbarao, K.4    Denison, M.R.5
  • 32
    • 0347722841 scopus 로고    scopus 로고
    • Heteronuclear multidimensional NMR experiments for the structure determination of proteins in solution employing pulsed field gradients
    • Sattler, J., J. Schleucher, and C. Griesinger. 1999. Heteronuclear multidimensional NMR experiments for the structure determination of proteins in solution employing pulsed field gradients. Prog. NMR Spectr. 34:93-158.
    • (1999) Prog. NMR Spectr. , vol.34 , pp. 93-158
    • Sattler, J.1    Schleucher, J.2    Griesinger, C.3
  • 35
    • 0347610773 scopus 로고
    • 13C nuclear magnetic resonance chemical shifts
    • 13C nuclear magnetic resonance chemical shifts. J. Am. Chem. Soc. 113:5490-5492.
    • (1991) J. Am. Chem. Soc. , vol.113 , pp. 5490-5492
    • Spera, S.1    Bax, A.2
  • 36
    • 0037424601 scopus 로고    scopus 로고
    • A model for statistical significance of local similarities in structure
    • Stark, A., S. Sunyaev, and R. B. Russell. 2003. A model for statistical significance of local similarities in structure. J. Mol. Biol. 326:1307-1316.
    • (2003) J. Mol. Biol. , vol.326 , pp. 1307-1316
    • Stark, A.1    Sunyaev, S.2    Russell, R.B.3
  • 37
    • 10044235725 scopus 로고    scopus 로고
    • Overexpression of 7a, a protein specifically encoded by the severe acute respiratory syndrome coronavirus, induces apoptosis via a caspase-dependent pathway
    • Tan, Y.-J., B. C. Fielding, P.-Y. Goh, S. Shen, T. H. P. Tan, S. G. Lim, and W. Hong. 2004. Overexpression of 7a, a protein specifically encoded by the severe acute respiratory syndrome coronavirus, induces apoptosis via a caspase-dependent pathway. J. Virol. 78:14043-14047.
    • (2004) J. Virol. , vol.78 , pp. 14043-14047
    • Tan, Y.-J.1    Fielding, B.C.2    Goh, P.-Y.3    Shen, S.4    Tan, T.H.P.5    Lim, S.G.6    Hong, W.7
  • 39
    • 0041852685 scopus 로고    scopus 로고
    • Equine arteritis virus non-structural protein 1, an essential factor for viral subgenomic mRNA synthesis, interacts with the cellular transcription co-factor p100
    • Tijms, M. A., and E. J. Snijder. 2003. Equine arteritis virus non-structural protein 1, an essential factor for viral subgenomic mRNA synthesis, interacts with the cellular transcription co-factor p100. J. Gen. Virol. 84:2317-2322.
    • (2003) J. Gen. Virol. , vol.84 , pp. 2317-2322
    • Tijms, M.A.1    Snijder, E.J.2
  • 42
    • 0041524259 scopus 로고    scopus 로고
    • NMR studies of structure and function of biological macromolecules
    • Wüthrich, K. 2003. NMR studies of structure and function of biological macromolecules. J. Biomol. NMR 27:13-39.
    • (2003) J. Biomol. NMR , vol.27 , pp. 13-39
    • Wüthrich, K.1
  • 43
    • 3042581007 scopus 로고    scopus 로고
    • Flexible structure alignment by chaining aligned fragment pairs allowing twists
    • Ye, Y., and A. Godzik. 2003. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics 19(Suppl. 2):II246-II255.
    • (2003) Bioinformatics , vol.19 , Issue.SUPPL. 2
    • Ye, Y.1    Godzik, A.2
  • 44
    • 0032888958 scopus 로고    scopus 로고
    • Processing of the human coronavirus 229E replicase polyproteins by the virus-encoded 3C-like proteinase: Identification of proteolytic products and cleavage sites common to pp1a and pp1ab
    • Ziebuhr, J., and S. G. Siddell. 1999. Processing of the human coronavirus 229E replicase polyproteins by the virus-encoded 3C-like proteinase: identification of proteolytic products and cleavage sites common to pp1a and pp1ab. J. Virol. 73:177-185.
    • (1999) J. Virol. , vol.73 , pp. 177-185
    • Ziebuhr, J.1    Siddell, S.G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.