메뉴 건너뛰기




Volumn 50, Issue 3-4, 2005, Pages 387-392

Maize genome structure and rearrangement

Author keywords

Cytogenetics; Gene rearrangement; Genome evolution; Repetitive DNA; Transposable elements

Indexed keywords

ZEA MAYS;

EID: 25844476698     PISSN: 00256153     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review
Times cited : (5)

References (46)
  • 1
    • 0031950437 scopus 로고    scopus 로고
    • Complex structure of knob DNA on maize chromosome 9: Retrotransposon invasion into heterochromatin
    • ANANIEV E.V., R.L. PHILLIPS, H.W. RINES, 1998 Complex structure of knob DNA on maize chromosome 9: retrotransposon invasion into heterochromatin. Genetics 149: 2025-2037.
    • (1998) Genetics , vol.149 , pp. 2025-2037
    • ANANIEV, E.V.1    PHILLIPS, R.L.2    RINES, H.W.3
  • 2
    • 16344372137 scopus 로고    scopus 로고
    • Higher throughput comparative genomics of wheat and related cereals
    • BENNETZEN J.L., 2003 Higher throughput comparative genomics of wheat and related cereals. Proc. Tenth Intl. Wheat Genetics Symp. 1: 215-220.
    • (2003) Proc. Tenth Intl. Wheat Genetics Symp , vol.1 , pp. 215-220
    • BENNETZEN, J.L.1
  • 3
    • 0006283087 scopus 로고
    • The generation of Mutator transposable element subfamilies in maize
    • BENNETZEN J.L., P.S. SPRINGER, 1994 The generation of Mutator transposable element subfamilies in maize. Theor. Appl. Genet. 87: 657-667.
    • (1994) Theor. Appl. Genet , vol.87 , pp. 657-667
    • BENNETZEN, J.L.1    SPRINGER, P.S.2
  • 4
    • 1842270676 scopus 로고
    • An insertion in the first intron of maize Adh1 affects transcript levels: Cloning of progenitor and mutant alleles
    • BENNETZEN J.L., J. SWANSON, W.C. TAYLOR, M. FREELING, 1984 An insertion in the first intron of maize Adh1 affects transcript levels: Cloning of progenitor and mutant alleles. Proc. Natl. Acad. Sci. USA 81: 4125-4128.
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , pp. 4125-4128
    • BENNETZEN, J.L.1    SWANSON, J.2    TAYLOR, W.C.3    FREELING, M.4
  • 5
    • 0028485631 scopus 로고
    • Active maize genes are unmodified and flanked by diverse classes of modified, highly repetitive DNA
    • BENNETZEN J.L., K. SCHRICK, P.S. SPRINGER, W.E. BROWN, P. SANMIGUEL, 1994 Active maize genes are unmodified and flanked by diverse classes of modified, highly repetitive DNA. Genome 37: 565-576.
    • (1994) Genome , vol.37 , pp. 565-576
    • BENNETZEN, J.L.1    SCHRICK, K.2    SPRINGER, P.S.3    BROWN, W.E.4    SANMIGUEL, P.5
  • 6
    • 85047683769 scopus 로고    scopus 로고
    • National Science Foundation-sponsored workshop report. Maize genome sequencing project
    • BENNETZEN J.L., V.L. CHANDLER, P. SCHNABLE, 2001 National Science Foundation-sponsored workshop report. Maize genome sequencing project. Plant Physiol. 127: 1572-1578.
    • (2001) Plant Physiol , vol.127 , pp. 1572-1578
    • BENNETZEN, J.L.1    CHANDLER, V.L.2    SCHNABLE, P.3
  • 8
    • 21644437476 scopus 로고    scopus 로고
    • Mechanisms of recent genome size variation in flowering plants
    • BENNETZEN J.L., J. MA, K.M. DEVOS, 2005 Mechanisms of recent genome size variation in flowering plants. Annals Bot. 95: 127-132.
    • (2005) Annals Bot , vol.95 , pp. 127-132
    • BENNETZEN, J.L.1    MA, J.2    DEVOS, K.M.3
  • 9
    • 0027507739 scopus 로고
    • Characterization of the pufferfish (Fugu) genome as a compact model vertebrate genome
    • BRENNER S., G. ELGAR, R. SANDFORD, A. MACRAE, B, VENKATESHT, S. APARICIO, 1993 Characterization of the pufferfish (Fugu) genome as a compact model vertebrate genome. Nature 366: 265-268.
    • (1993) Nature , vol.366 , pp. 265-268
    • BRENNER, S.1    ELGAR, G.2    SANDFORD, R.3    MACRAE, A.4    VENKATESHT, B.5    APARICIO, S.6
  • 11
    • 0000940356 scopus 로고
    • The B chromosome of maize
    • CARLSON W.R., 1986 The B chromosome of maize. Crit. Rev. Plant Sci. 3: 201-226.
    • (1986) Crit. Rev. Plant Sci , vol.3 , pp. 201-226
    • CARLSON, W.R.1
  • 12
    • 0023408010 scopus 로고
    • Transposition of Ac from the P locus of maize into unreplicated chromosomal sites
    • CHEN J., I.M. GREENBLATT, S.L. DELLAPORTA, 1987 Transposition of Ac from the P locus of maize into unreplicated chromosomal sites. Genetics 117: 109-116.
    • (1987) Genetics , vol.117 , pp. 109-116
    • CHEN, J.1    GREENBLATT, I.M.2    DELLAPORTA, S.L.3
  • 13
    • 0028978110 scopus 로고
    • Mu1-related transposable elements of maize preferentially insert into low copy number DNA
    • CRESSE A.D., S.H. HULBERT, W.E. BROWN, J.R. LUCAS, J.L. BENNETZEN, 1995 Mu1-related transposable elements of maize preferentially insert into low copy number DNA. Genetics 140: 315-324.
    • (1995) Genetics , vol.140 , pp. 315-324
    • CRESSE, A.D.1    HULBERT, S.H.2    BROWN, W.E.3    LUCAS, J.R.4    BENNETZEN, J.L.5
  • 14
    • 0036061848 scopus 로고    scopus 로고
    • Genome size reduction through illegitimate recombination counteracts genome expansion in Arabidopsis
    • DEVOS K.M., J.K.M. BROWN, J.L. BENNETZEN, 2002 Genome size reduction through illegitimate recombination counteracts genome expansion in Arabidopsis. Genome Res. 12: 1075-1079.
    • (2002) Genome Res , vol.12 , pp. 1075-1079
    • DEVOS, K.M.1    BROWN, J.K.M.2    BENNETZEN, J.L.3
  • 15
    • 0018894384 scopus 로고
    • Selfish genes, the phenotype paradigm and genome evolution
    • DOOLITTLE W.F., C. SAPIENZA, 1980 Selfish genes, the phenotype paradigm and genome evolution. Nature 284: 601-603.
    • (1980) Nature , vol.284 , pp. 601-603
    • DOOLITTLE, W.F.1    SAPIENZA, C.2
  • 16
    • 0029976290 scopus 로고    scopus 로고
    • Characterization of four dispersed repetitive DNA sequences in Zea mays and their use in constructing contiguous DNA fragments using YAC clones
    • EDWARDS K.J., J. VEUSKENS, H. RAWLES, A. DALY, J.L. BENNETZEN, 1996 Characterization of four dispersed repetitive DNA sequences in Zea mays and their use in constructing contiguous DNA fragments using YAC clones. Genome 39: 811-817.
    • (1996) Genome , vol.39 , pp. 811-817
    • EDWARDS, K.J.1    VEUSKENS, J.2    RAWLES, H.3    DALY, A.4    BENNETZEN, J.L.5
  • 17
    • 0037047037 scopus 로고    scopus 로고
    • Intraspecific violation of genetic colinearity and its implications in maize
    • FU H., H.K. DOONER, 2002 Intraspecific violation of genetic colinearity and its implications in maize. Proc. Natl. Acad. Sci. USA 99: 9573-9578.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 9573-9578
    • FU, H.1    DOONER, H.K.2
  • 18
    • 0142059819 scopus 로고    scopus 로고
    • A complex history of rearrangement in an orthologous region of the maize, sorghum and rice genomes
    • ILIC K., P.J. SANMIGUEL, J.L. BENNETZEN, 2003 A complex history of rearrangement in an orthologous region of the maize, sorghum and rice genomes. Proc. Natl. Acad. Sci. USA 100: 12265-12270.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 12265-12270
    • ILIC, K.1    SANMIGUEL, P.J.2    BENNETZEN, J.L.3
  • 19
    • 4944239027 scopus 로고    scopus 로고
    • Pack-MULE transposable elements mediate gene evolution in plants
    • JIANG N., Z. BAO, X. ZHANG, S.R. EDDY, S.R. WESSLER, 2004 Pack-MULE transposable elements mediate gene evolution in plants. Nature 431: 569-573.
    • (2004) Nature , vol.431 , pp. 569-573
    • JIANG, N.1    BAO, Z.2    ZHANG, X.3    EDDY, S.R.4    WESSLER, S.R.5
  • 20
    • 0028485954 scopus 로고
    • Integration and nonrandom mutation of a plasma membrane proton ATPase gene fragment within the Bs1 retroelement of maize
    • JIN Y.-K., J.L. BENNETZEN, 1994 Integration and nonrandom mutation of a plasma membrane proton ATPase gene fragment within the Bs1 retroelement of maize. Plant Cell 6: 1177-1186.
    • (1994) Plant Cell , vol.6 , pp. 1177-1186
    • JIN, Y.-K.1    BENNETZEN, J.L.2
  • 21
    • 0022066036 scopus 로고
    • A low copy number, copia-like transposon in maize
    • JOHNS M.A., J. MOTTINGER, M. FREELING, 1985 A low copy number, copia-like transposon in maize. EMBO J. 4: 1093-1102.
    • (1985) EMBO J , vol.4 , pp. 1093-1102
    • JOHNS, M.A.1    MOTTINGER, J.2    FREELING, M.3
  • 24
    • 84966162827 scopus 로고
    • Nuclear DNA content in the genera Zea and Sorghum. Intergeneric, interspecific and intraspecific variation
    • LAURIE D.A., M.D. BENNETT, 1985 Nuclear DNA content in the genera Zea and Sorghum. Intergeneric, interspecific and intraspecific variation. Heredity 55: 307-313.
    • (1985) Heredity , vol.55 , pp. 307-313
    • LAURIE, D.A.1    BENNETT, M.D.2
  • 25
    • 0032126220 scopus 로고    scopus 로고
    • Amplicons of maize zein genes are conserved within genic but expanded and constricted in intergenic regions
    • LLACA V., J. MESSING, 1998 Amplicons of maize zein genes are conserved within genic but expanded and constricted in intergenic regions. Plant J. 15: 211-220.
    • (1998) Plant J , vol.15 , pp. 211-220
    • LLACA, V.1    MESSING, J.2
  • 26
    • 0001398460 scopus 로고
    • Chromosomes in maize and maize relatives
    • LONGLEY A.E., 1924 Chromosomes in maize and maize relatives. J. Agr. Res. 28: 673-682.
    • (1924) J. Agr. Res , vol.28 , pp. 673-682
    • LONGLEY, A.E.1
  • 27
    • 0000036765 scopus 로고
    • Chromosomes of maize from North American Indians
    • LONGLEY A.E., 1938 Chromosomes of maize from North American Indians. J. Agr. Res. 57: 177-196.
    • (1938) J. Agr. Res , vol.57 , pp. 177-196
    • LONGLEY, A.E.1
  • 28
    • 4344616881 scopus 로고    scopus 로고
    • Rapid recent growth and divergence of rice nuclear genomes
    • MA J., J.L. BENNETZEN, 2004 Rapid recent growth and divergence of rice nuclear genomes. Proc. Natl. Acad. Sci. USA 101: 12404-12410.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 12404-12410
    • MA, J.1    BENNETZEN, J.L.2
  • 29
    • 2342466982 scopus 로고    scopus 로고
    • Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice
    • MA J., K.M. DEVOS, J.L. BENNETZEN, 2004 Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice. Genome Res. 14: 860-869.
    • (2004) Genome Res , vol.14 , pp. 860-869
    • MA, J.1    DEVOS, K.M.2    BENNETZEN, J.L.3
  • 30
    • 0031154028 scopus 로고    scopus 로고
    • Retrotransposon insertion into the maize waxy gene results in tissue-specific RNA processing
    • MARILLONNET S., S.R. WESSLER, 1997 Retrotransposon insertion into the maize waxy gene results in tissue-specific RNA processing. Plant Cell 9: 967-978.
    • (1997) Plant Cell , vol.9 , pp. 967-978
    • MARILLONNET, S.1    WESSLER, S.R.2
  • 31
    • 0011353308 scopus 로고
    • Genetic and cytological studies of maize
    • MCCLINTOCK B., 1959 Genetic and cytological studies of maize. Carnegie Inst. Wash. Year Book 58: 452-456.
    • (1959) Carnegie Inst. Wash. Year Book , vol.58 , pp. 452-456
    • MCCLINTOCK, B.1
  • 32
    • 0034755894 scopus 로고    scopus 로고
    • Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome
    • MEYERS B.C., S.V. TINGEY, M. MORGANTE, 2001 Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome. Genome Res. 11: 1660-1676.
    • (2001) Genome Res , vol.11 , pp. 1660-1676
    • MEYERS, B.C.1    TINGEY, S.V.2    MORGANTE, M.3
  • 33
    • 0018857680 scopus 로고
    • Selfish DNA: The ultimate parasite
    • ORGEL L.E., F.H. CRICK, 1980 Selfish DNA: the ultimate parasite. Nature 284: 604-607.
    • (1980) Nature , vol.284 , pp. 604-607
    • ORGEL, L.E.1    CRICK, F.H.2
  • 35
    • 4043053778 scopus 로고    scopus 로고
    • PHELPS-DURR T.L., J.A. BIRCHLER, 2004 An asymptotic determination of minimum centromere size for the maize B chromosome. Cytogen. Genome Res. 106: 309-313.
    • PHELPS-DURR T.L., J.A. BIRCHLER, 2004 An asymptotic determination of minimum centromere size for the maize B chromosome. Cytogen. Genome Res. 106: 309-313.
  • 36
    • 0036910539 scopus 로고    scopus 로고
    • Sequence and physical map analyses of the maize Rp1 complex uncovers numerous sites and unexpected mechanisms of local rearrangement
    • RAMAKRISHNA W., J. EMBERTON, M. OGDEN, P. SANMIGUEL, J.L. BENNETZEN, 2002 Sequence and physical map analyses of the maize Rp1 complex uncovers numerous sites and unexpected mechanisms of local rearrangement. Plant Cell 14: 3213-3223.
    • (2002) Plant Cell , vol.14 , pp. 3213-3223
    • RAMAKRISHNA, W.1    EMBERTON, J.2    OGDEN, M.3    SANMIGUEL, P.4    BENNETZEN, J.L.5
  • 37
    • 0000042154 scopus 로고
    • C-band heterochromatin and DNA content in Zea mays
    • RAYBURN A.L., H.J. PRICE, J.D. SMITH, J.R. GOLD, 1985 C-band heterochromatin and DNA content in Zea mays. Amer. J. Bot. 71: 1610-1617.
    • (1985) Amer. J. Bot , vol.71 , pp. 1610-1617
    • RAYBURN, A.L.1    PRICE, H.J.2    SMITH, J.D.3    GOLD, J.R.4
  • 38
    • 0000532143 scopus 로고
    • The effect of abnormal chromosome 10 on preferential segregation and crossing over in maize
    • RHOADES M.M., E. DEMPSEY, 1966 The effect of abnormal chromosome 10 on preferential segregation and crossing over in maize. Genetics 53: 989-1020.
    • (1966) Genetics , vol.53 , pp. 989-1020
    • RHOADES, M.M.1    DEMPSEY, E.2
  • 42
    • 0024692289 scopus 로고
    • Mu transposable elements are structurally diverse and distributed across the genus Zea
    • TALBERT L.E., G.I. PATTERSON, V.L. CHANDLER, 1989 Mu transposable elements are structurally diverse and distributed across the genus Zea. J. Mol. Evol. 29: 28-39.
    • (1989) J. Mol. Evol , vol.29 , pp. 28-39
    • TALBERT, L.E.1    PATTERSON, G.I.2    CHANDLER, V.L.3
  • 44
    • 0034143275 scopus 로고    scopus 로고
    • Structural domains and matrix attachment regions along colinear chromosomal segments of maize and sorghum
    • TIKHONOV A.P., J.L. BENNETZEN, Z. AVRAMOVA, 2000 Structural domains and matrix attachment regions along colinear chromosomal segments of maize and sorghum. Plant Cell 12: 249-264.
    • (2000) Plant Cell , vol.12 , pp. 249-264
    • TIKHONOV, A.P.1    BENNETZEN, J.L.2    AVRAMOVA, Z.3
  • 45
    • 0345731466 scopus 로고    scopus 로고
    • WHITELAW C.A., W.B. BARBAZUK, G. PERTEA, A.P. CHAN, F. CHEUNG, Y. LEE, L. ZHENG, S. VAN HEERINGEN, S. KARAMYCHEV1, J.L. BENNETZEN, P. SANMIGUEL, N. LAKEY, J. BEDELL, Y. YUAN, M.A. BUDIMAN, A. RESNICK, S. VAN AKEN, T. UTTERBACK, S. RIEDMULLER, M. WILLIAMS, T. FELDBLYUM, K. SCHUBERT, R. BEACHY, C.M. FRASER, J. QUACKENBUSH, 2003 Enrichment of gene-coding sequences in maize by genome filtration. Science 302: 2118-2120.
    • WHITELAW C.A., W.B. BARBAZUK, G. PERTEA, A.P. CHAN, F. CHEUNG, Y. LEE, L. ZHENG, S. VAN HEERINGEN, S. KARAMYCHEV1, J.L. BENNETZEN, P. SANMIGUEL, N. LAKEY, J. BEDELL, Y. YUAN, M.A. BUDIMAN, A. RESNICK, S. VAN AKEN, T. UTTERBACK, S. RIEDMULLER, M. WILLIAMS, T. FELDBLYUM, K. SCHUBERT, R. BEACHY, C.M. FRASER, J. QUACKENBUSH, 2003 Enrichment of gene-coding sequences in maize by genome filtration. Science 302: 2118-2120.
  • 46
    • 0033951447 scopus 로고    scopus 로고
    • Recent, extensive, and preferential insertion of members of the miniature inverted-repeat transposable element family Heartbreaker into genic regions of maize
    • ZHANG Q., J. ARBUCKLE, S.R. WESSLER, 2000 Recent, extensive, and preferential insertion of members of the miniature inverted-repeat transposable element family Heartbreaker into genic regions of maize. Proc. Natl. Acad. Sci. USA 97: 1160-1165.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 1160-1165
    • ZHANG, Q.1    ARBUCKLE, J.2    WESSLER, S.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.