-
1
-
-
0842289654
-
Molecular determinants for ATP-binding in proteins: A data mining and quantum chemical analysis
-
Mao, L., Wang, Y., Liu, Y., and Hu, X. (2004) Molecular determinants for ATP-binding in proteins: A data mining and quantum chemical analysis, J. Mol. Biol. 336, 787-807.
-
(2004)
J. Mol. Biol.
, vol.336
, pp. 787-807
-
-
Mao, L.1
Wang, Y.2
Liu, Y.3
Hu, X.4
-
2
-
-
0032614298
-
Aminoglycoside phosphotransferases: Proteins, structure, and mechanism
-
Wright, G. D., and Thompson, P. R. (1999) Aminoglycoside phosphotransferases: Proteins, structure, and mechanism, Front. Biosci. 4, D9-D21.
-
(1999)
Front. Biosci.
, vol.4
-
-
Wright, G.D.1
Thompson, P.R.2
-
3
-
-
0033103478
-
Structure of acetylcholinesterase complexed with E2020 (Aricept): Implications for the design of new anti-Alzheimer drugs
-
Kryger, G., Silman, I., and Sussman, J. L. (1999) Structure of acetylcholinesterase complexed with E2020 (Aricept): Implications for the design of new anti-Alzheimer drugs, Struct. Fold Des. 7, 297-307.
-
(1999)
Struct. Fold Des.
, vol.7
, pp. 297-307
-
-
Kryger, G.1
Silman, I.2
Sussman, J.L.3
-
4
-
-
0242417008
-
Interactions with aromatic rings in chemical and biological recognition
-
Meyer, E. A., Castellano, R. K., and Diederich, F. (2003) Interactions with aromatic rings in chemical and biological recognition, Angew. Chem. Int. Ed. 42, 1210-1250.
-
(2003)
Angew. Chem. Int. Ed.
, vol.42
, pp. 1210-1250
-
-
Meyer, E.A.1
Castellano, R.K.2
Diederich, F.3
-
5
-
-
0035979336
-
Structural analyses of nucleotide binding to an aminoglycoside phosphotransferase
-
Burk, D. L., Hon, W. C., Leung, A. K., and Berghuis, A. M. (2001) Structural analyses of nucleotide binding to an aminoglycoside phosphotransferase, Biochemistry 40, 8756-8764.
-
(2001)
Biochemistry
, vol.40
, pp. 8756-8764
-
-
Burk, D.L.1
Hon, W.C.2
Leung, A.K.3
Berghuis, A.M.4
-
6
-
-
0036851016
-
Analysis of the π-π stacking interactions between the aminoglycoside antibiotic kinase APH(3′)-IIIa and its nucleotide ligands
-
Boehr, D. D., Parley, A. R., Wright, G. D., and Cox, J. R. (2002) Analysis of the π-π stacking interactions between the aminoglycoside antibiotic kinase APH(3′)-IIIa and its nucleotide ligands, Chem. Biol. 9, 1209-1217.
-
(2002)
Chem. Biol.
, vol.9
, pp. 1209-1217
-
-
Boehr, D.D.1
Parley, A.R.2
Wright, G.D.3
Cox, J.R.4
-
7
-
-
0030830868
-
Structure of an enzyme required for aminoglycoside antibiotic resistance reveals homology to eukaryotic protein kinases
-
Hon, W. C., McKay, G. A., Thompson, P. R., Sweet, R. M., Yang, D. S., Wright, G. D., and Berghuis, A. M. (1997) Structure of an enzyme required for aminoglycoside antibiotic resistance reveals homology to eukaryotic protein kinases, Cell 89, 887-895.
-
(1997)
Cell
, vol.89
, pp. 887-895
-
-
Hon, W.C.1
McKay, G.A.2
Thompson, P.R.3
Sweet, R.M.4
Yang, D.S.5
Wright, G.D.6
Berghuis, A.M.7
-
8
-
-
0036791512
-
Latest developments in crystallography and structure-based design of protein kinase inhibitors as drug candidates
-
Williams, D. H., and Mitchell, T. (2002) Latest developments in crystallography and structure-based design of protein kinase inhibitors as drug candidates, Curr. Opin. Pharmacol. 2, 567-573.
-
(2002)
Curr. Opin. Pharmacol.
, vol.2
, pp. 567-573
-
-
Williams, D.H.1
Mitchell, T.2
-
9
-
-
0034788453
-
Tyrosine kinase inhibitors: From rational design to clinical trials
-
Traxler, P., Bold, G., Buchdunger, E., Caravatti, G., Furet, P., Manley, P., O'Reilly, T., Wood, J., and Zimmermann, J. (2001) Tyrosine kinase inhibitors: From rational design to clinical trials, Med. Res. Rev. 21, 499-512.
-
(2001)
Med. Res. Rev.
, vol.21
, pp. 499-512
-
-
Traxler, P.1
Bold, G.2
Buchdunger, E.3
Caravatti, G.4
Furet, P.5
Manley, P.6
O'Reilly, T.7
Wood, J.8
Zimmermann, J.9
-
10
-
-
0036165807
-
FDA licences imatinib mesylate for CML
-
Habeck, M. (2002) FDA licences imatinib mesylate for CML, Lancet Oncol. 3, 6.
-
(2002)
Lancet Oncol.
, vol.3
, pp. 6
-
-
Habeck, M.1
-
11
-
-
0032854118
-
The structure-based design of ATP-site directed protein kinase inhibitors
-
Toledo, L. M., Lydon, N. B., and Elbaum, D. (1999) The structure-based design of ATP-site directed protein kinase inhibitors, Curr. Med. Chem. 6, 775-805.
-
(1999)
Curr. Med. Chem.
, vol.6
, pp. 775-805
-
-
Toledo, L.M.1
Lydon, N.B.2
Elbaum, D.3
-
12
-
-
19744364796
-
Structural bioinformatics-based design of selective, irreversible kinase inhibitors
-
Cohen, M. S., Zhang, C., Shokat, K. M., and Taunton, J. (2005) Structural bioinformatics-based design of selective, irreversible kinase inhibitors, Science 308, 1318-1321.
-
(2005)
Science
, vol.308
, pp. 1318-1321
-
-
Cohen, M.S.1
Zhang, C.2
Shokat, K.M.3
Taunton, J.4
-
13
-
-
21444454894
-
A second-site suppressor strategy for chemical genetic analysis of diverse protein kinases
-
Zhang, C., Kenski, D. M., Paulson, J. L., Bonshtien, A., Sessa, G., Cross, J. V., Templeton, D. J., and Shokat, K. M. (2005) A second-site suppressor strategy for chemical genetic analysis of diverse protein kinases, Nat. Methods 2, 435-441.
-
(2005)
Nat. Methods
, vol.2
, pp. 435-441
-
-
Zhang, C.1
Kenski, D.M.2
Paulson, J.L.3
Bonshtien, A.4
Sessa, G.5
Cross, J.V.6
Templeton, D.J.7
Shokat, K.M.8
-
14
-
-
0029151201
-
CH/π interaction in the packing of the adenine ring in protein structures
-
Chakrabarti, P., and Uttamkumar, S. (1995) CH/π interaction in the packing of the adenine ring in protein structures, J. Mol. Biol. 251, 9-14.
-
(1995)
J. Mol. Biol.
, vol.251
, pp. 9-14
-
-
Chakrabarti, P.1
Uttamkumar, S.2
-
15
-
-
0028358078
-
Broad spectrum aminoglycoside phosphotransferase type III from Enterococcus: Overexpression, purification, and substrate specificity
-
McKay, G. A., Thompson, P. R., and Wright, G. D. (1994) Broad spectrum aminoglycoside phosphotransferase type III from Enterococcus: Overexpression, purification, and substrate specificity, Biochemistry 33, 6936-6944.
-
(1994)
Biochemistry
, vol.33
, pp. 6936-6944
-
-
McKay, G.A.1
Thompson, P.R.2
Wright, G.D.3
-
16
-
-
0024356301
-
Rapid measurement of binding constants and heats of binding using a new titration calorimeter
-
Wiseman, T., Williston, S., Brandts, J. F., and Lin, L. N. (1989) Rapid measurement of binding constants and heats of binding using a new titration calorimeter, Anal. Biochem. 179, 131-137.
-
(1989)
Anal. Biochem.
, vol.179
, pp. 131-137
-
-
Wiseman, T.1
Williston, S.2
Brandts, J.F.3
Lin, L.N.4
-
17
-
-
0021324488
-
Deaza analogues of adenosine as inhibitors of platelet aggregation
-
Antonini, I., Cristalli, G., Franchetti, P., Grifantini, M., Martelli, S., and Petrelli, F. (1984) Deaza analogues of adenosine as inhibitors of platelet aggregation, J. Pharm. Sci. 73, 3666-3669.
-
(1984)
J. Pharm. Sci.
, vol.73
, pp. 3666-3669
-
-
Antonini, I.1
Cristalli, G.2
Franchetti, P.3
Grifantini, M.4
Martelli, S.5
Petrelli, F.6
-
18
-
-
0023190232
-
Improved synthesis and antitumor activity of 1-deazaadenosine
-
Cristalli, G., Franchetti, P., Grifantini, M., Vittori, S., Bordoni, T., and Geroni, C. (1987) Improved synthesis and antitumor activity of 1-deazaadenosine, J. Med. Chem. 30, 1686-1688.
-
(1987)
J. Med. Chem.
, vol.30
, pp. 1686-1688
-
-
Cristalli, G.1
Franchetti, P.2
Grifantini, M.3
Vittori, S.4
Bordoni, T.5
Geroni, C.6
-
20
-
-
0026034685
-
Hydrogen bonds involving sulfur atoms in proteins
-
Gregoret, L. M., Rader, S. D., Fletterick, R. J., and Cohen, F. E. (1991) Hydrogen bonds involving sulfur atoms in proteins, Proteins 9, 99-107.
-
(1991)
Proteins
, vol.9
, pp. 99-107
-
-
Gregoret, L.M.1
Rader, S.D.2
Fletterick, R.J.3
Cohen, F.E.4
-
21
-
-
0028882693
-
Kinetic mechanism of aminoglycoside phosphotransferase type IIIa. Evidence for a Theorell-Chance mechanism
-
McKay, G. A., and Wright, G. D. (1995) Kinetic mechanism of aminoglycoside phosphotransferase type IIIa. Evidence for a Theorell-Chance mechanism, J. Biol. Chem. 270, 24686-24692.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 24686-24692
-
-
McKay, G.A.1
Wright, G.D.2
-
22
-
-
0029941909
-
Catalytic mechanism of enterococcal kanamycin kinase (APH(3′)-IIIa) : Viscosity, thio, and solvent isotope effects support a Theorell-Chance mechanism
-
McKay, G. A., and Wright, G. D. (1996) Catalytic mechanism of enterococcal kanamycin kinase (APH(3′)-IIIa): Viscosity, thio, and solvent isotope effects support a Theorell-Chance mechanism, Biochemistry 35, 8680-8685.
-
(1996)
Biochemistry
, vol.35
, pp. 8680-8685
-
-
McKay, G.A.1
Wright, G.D.2
-
23
-
-
8744252619
-
Thermodynamics of aminoglycoside binding to aminoglycoside-3′- phosphotransferase Ilia studied by isothermal titration calorimetry
-
Özen, C., and Serpersu, E. H. (2004) Thermodynamics of aminoglycoside binding to aminoglycoside-3′-phosphotransferase Ilia studied by isothermal titration calorimetry, Biochemistry 43, 14667-14675.
-
(2004)
Biochemistry
, vol.43
, pp. 14667-14675
-
-
Özen, C.1
Serpersu, E.H.2
-
24
-
-
0035442411
-
Direct measurement of protein binding energetics by isothermal titration calorimetry
-
Leavitt, S., and Freire, E. (2001) Direct measurement of protein binding energetics by isothermal titration calorimetry, Curr. Opin. Struct. Biol. 11, 560-566.
-
(2001)
Curr. Opin. Struct. Biol.
, vol.11
, pp. 560-566
-
-
Leavitt, S.1
Freire, E.2
-
25
-
-
1642323740
-
Protein kinase inhibitors: Insights into drug design from structure
-
Noble, M. E., Endicott, J. A., and Johnson, L. N. (2004) Protein kinase inhibitors: Insights into drug design from structure, Science 303, 1800-1805.
-
(2004)
Science
, vol.303
, pp. 1800-1805
-
-
Noble, M.E.1
Endicott, J.A.2
Johnson, L.N.3
-
26
-
-
0035312350
-
Magic bullets for protein kinases
-
Bishop, A. C., Buzko, O., and Shokat, K. M. (2001) Magic bullets for protein kinases, Trends Cell Biol. 11, 167-172.
-
(2001)
Trends Cell Biol.
, vol.11
, pp. 167-172
-
-
Bishop, A.C.1
Buzko, O.2
Shokat, K.M.3
-
27
-
-
0037047423
-
Protein engineering of protein kinase a catalytic subunits results in the acquisition of novel inhibitor sensitivity
-
Niswender, C. M., Ishihara, R. W., Judge, L. M., Zhang, C., Shokat, K. M., and McKnight, G. S. (2002) Protein engineering of protein kinase A catalytic subunits results in the acquisition of novel inhibitor sensitivity, J. Biol. Chem. 277, 28916-28922.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 28916-28922
-
-
Niswender, C.M.1
Ishihara, R.W.2
Judge, L.M.3
Zhang, C.4
Shokat, K.M.5
McKnight, G.S.6
-
28
-
-
0034678016
-
Mimicking the structure and function of DNA: Insights into DNA stability and replication
-
Kool, E. T., Morales, J. C., and Guckian, K. M. (2000) Mimicking the structure and function of DNA: Insights into DNA stability and replication, Angew. Chem. Int. Ed. 39, 990-1009.
-
(2000)
Angew. Chem. Int. Ed.
, vol.39
, pp. 990-1009
-
-
Kool, E.T.1
Morales, J.C.2
Guckian, K.M.3
-
29
-
-
0034654495
-
Factors contributing to aromatic stacking in water: Evaluation in the context of DNA
-
Guckian, K. M., Schweitzer, B. A., Ren, R. X.-F., Sheils, C. J., Tahmassebi, D. C., and Kool, E. T. (2000) Factors contributing to aromatic stacking in water: Evaluation in the context of DNA, J. Am. Chem. Soc. 122, 2213-2222.
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 2213-2222
-
-
Guckian, K.M.1
Schweitzer, B.A.2
Ren, R.X.-F.3
Sheils, C.J.4
Tahmassebi, D.C.5
Kool, E.T.6
-
30
-
-
0035132660
-
The physical basis of nucleic acid base stacking in water
-
Luo, R., Gilson, H. S. R., Potter, M. J., and Gilson, M. K. (2001) The physical basis of nucleic acid base stacking in water, Biophys. J. 80, 140-148.
-
(2001)
Biophys. J.
, vol.80
, pp. 140-148
-
-
Luo, R.1
Gilson, H.S.R.2
Potter, M.J.3
Gilson, M.K.4
-
31
-
-
0029118487
-
A free energy analysis of nucleic acid base stacking in aqueous solution
-
Friedman, R. A., and Honig, B. (1995) A free energy analysis of nucleic acid base stacking in aqueous solution, Biophys. J. 69, 1528-1535.
-
(1995)
Biophys. J.
, vol.69
, pp. 1528-1535
-
-
Friedman, R.A.1
Honig, B.2
|