-
1
-
-
0031815749
-
How do small single-domain proteins fold?
-
Jackson SE. How do small single-domain proteins fold? Fold Des 1998;3:R81-R91.
-
(1998)
Fold des
, vol.3
-
-
Jackson, S.E.1
-
3
-
-
0035252683
-
Mechanisms of protein folding
-
Grantcharova V, Alm EJ, Baker D, Horwich, AL. Mechanisms of protein folding. Curr Opin Struct Biol 2001;11:70-82.
-
(2001)
Curr Opin Struct Biol
, vol.11
, pp. 70-82
-
-
Grantcharova, V.1
Alm, E.J.2
Baker, D.3
Horwich, A.L.4
-
4
-
-
0024358426
-
Mapping the transition state and pathway of protein folding by protein engineering
-
Matouschek A, Kellis JT, Serrano L, Fersht, AR. Mapping the transition state and pathway of protein folding by protein engineering. Nature 1989;340:122-126.
-
(1989)
Nature
, vol.340
, pp. 122-126
-
-
Matouschek, A.1
Kellis, J.T.2
Serrano, L.3
Fersht, A.R.4
-
5
-
-
0034604105
-
A surprising simplicity to protein folding
-
Baker D. A surprising simplicity to protein folding. Nature 2000;405:39-42.
-
(2000)
Nature
, vol.405
, pp. 39-42
-
-
Baker, D.1
-
6
-
-
0032502839
-
Contact order, transition state placement and the refolding rates of single domain proteins
-
Plaxco KW, Simons, KT, Baker, D. Contact order, transition state placement and the refolding rates of single domain proteins. J Mol Biol 1998;277:985-994.
-
(1998)
J Mol Biol
, vol.277
, pp. 985-994
-
-
Plaxco, K.W.1
Simons, K.T.2
Baker, D.3
-
7
-
-
0034687123
-
Topology, stability, sequence, and length: Defining the determinants of two-state protein folding kinetics
-
Plaxco KW, Simons KT, Ruczinski I, Baker D. Topology, stability, sequence, and length: Defining the determinants of two-state protein folding kinetics. Biochemistry 2000;39:11177-11183.
-
(2000)
Biochemistry
, vol.39
, pp. 11177-11183
-
-
Plaxco, K.W.1
Simons, K.T.2
Ruczinski, I.3
Baker, D.4
-
8
-
-
0346458804
-
Class-specific correlations between protein folding rate, structure-derived, and sequence-derived descriptors
-
Kuznetsov IB, Rackovsky S. Class-specific correlations between protein folding rate, structure-derived, and sequence-derived descriptors. Proteins 2004;54:333-341.
-
(2004)
Proteins
, vol.54
, pp. 333-341
-
-
Kuznetsov, I.B.1
Rackovsky, S.2
-
9
-
-
0035173844
-
The roles of stability and contact order in determining protein folding rates
-
Dinner AR, Karplus M. The roles of stability and contact order in determining protein folding rates. Nat Struct Biol 2001;8:21-22.
-
(2001)
Nat Struct Biol
, vol.8
, pp. 21-22
-
-
Dinner, A.R.1
Karplus, M.2
-
10
-
-
0042510944
-
Contact order revisited: Influence of protein size on the folding rate
-
Ivankov DN, Garbuzynskiy SO, Alm E, Plaxco KW, Baker D, Finkelstein AV. Contact order revisited: influence of protein size on the folding rate. Protein Sci 2003;12:2057-2062.
-
(2003)
Protein Sci
, vol.12
, pp. 2057-2062
-
-
Ivankov, D.N.1
Garbuzynskiy, S.O.2
Alm, E.3
Plaxco, K.W.4
Baker, D.5
Finkelstein, A.V.6
-
11
-
-
0035967862
-
Comparison between long-range interactions and contact order in determining the folding rate of two-state proteins: Application of long-range order to folding rate prediction
-
Gromiha MM, Selvaraj S. Comparison between long-range interactions and contact order in determining the folding rate of two-state proteins: application of long-range order to folding rate prediction. J Mol Biol 2001;310:27-32.
-
(2001)
J Mol Biol
, vol.310
, pp. 27-32
-
-
Gromiha, M.M.1
Selvaraj, S.2
-
12
-
-
0037133574
-
How the folding rate constant of simple, single-domain proteins depends on the number of native contacts
-
Makarov DE, Keller CA, Plaxco KW, Metiu H. How the folding rate constant of simple, single-domain proteins depends on the number of native contacts. Proc Natl Acad Sci USA 2002;99:3535-3539.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 3535-3539
-
-
Makarov, D.E.1
Keller, C.A.2
Plaxco, K.W.3
Metiu, H.4
-
13
-
-
0036385839
-
Elastic properties of proteins: Insight on the folding process and evolutionary selection of native structures
-
Micheletti C, Lattanzi G, Maritan A. Elastic properties of proteins: insight on the folding process and evolutionary selection of native structures. J Mol Biol 2002;321:909-921.
-
(2002)
J Mol Biol
, vol.321
, pp. 909-921
-
-
Micheletti, C.1
Lattanzi, G.2
Maritan, A.3
-
14
-
-
0037375366
-
Prediction of folding rates and transition-state placement from native-state geometry
-
Micheletti C. Prediction of folding rates and transition-state placement from native-state geometry. Proteins 2003;51:74-84.
-
(2003)
Proteins
, vol.51
, pp. 74-84
-
-
Micheletti, C.1
-
15
-
-
0037432567
-
Local secondary structure content predicts folding rates for simple, two-state proteins
-
Gong HP, Isom DG, Srinivasan R, Rose GD. Local secondary structure content predicts folding rates for simple, two-state proteins. J Mol Biol 2003;327:1149-1154.
-
(2003)
J Mol Biol
, vol.327
, pp. 1149-1154
-
-
Gong, H.P.1
Isom, D.G.2
Srinivasan, R.3
Rose, G.D.4
-
16
-
-
0038693127
-
Structural determinants of the rate of protein folding
-
Nolting B, Schalike W, Hampel P, Grundig F, Gantert S, Sips N, Bandlow W, Qi PX. Structural determinants of the rate of protein folding. J Theo Biol 2003;223:299-307.
-
(2003)
J Theo Biol
, vol.223
, pp. 299-307
-
-
Nolting, B.1
Schalike, W.2
Hampel, P.3
Grundig, F.4
Gantert, S.5
Sips, N.6
Bandlow, W.7
Qi, P.X.8
-
17
-
-
0033613255
-
Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures
-
Alm E, Baker D. Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures. Proc Natl Acad Sci USA 1999;96:11305-11310.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 11305-11310
-
-
Alm, E.1
Baker, D.2
-
18
-
-
0033613165
-
A simple model for calculating the kinetics of protein folding from three-dimensional structures
-
Muñoz V, Eaton WA. A simple model for calculating the kinetics of protein folding from three-dimensional structures. Proc Natl Acad Sci USA 1999;96:11311-11316.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 11311-11316
-
-
Muñoz, V.1
Eaton, W.A.2
-
19
-
-
0033613131
-
A theoretical search for folding/unfolding nuclei in three-dimensional protein structures
-
Galzitskaya OV, Finkelstein AV. A theoretical search for folding/unfolding nuclei in three-dimensional protein structures. Proc Natl Acad Sci USA 1999;96:11299-11304.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 11299-11304
-
-
Galzitskaya, O.V.1
Finkelstein, A.V.2
-
20
-
-
0034671177
-
The SH3-fold family: Experimental evidence and prediction of variations in the folding pathways
-
Guerois R, Serrano L. The SH3-fold family: experimental evidence and prediction of variations in the folding pathways. J Mol Biol 2000;304:967-982.
-
(2000)
J Mol Biol
, vol.304
, pp. 967-982
-
-
Guerois, R.1
Serrano, L.2
-
21
-
-
0035928731
-
Theoretical study of a landscape of protein folding-unfolding pathways. Folding rates at midtransition
-
Ivankov DN, Finkelstein AV. Theoretical study of a landscape of protein folding-unfolding pathways. Folding rates at midtransition. Biochemistry 2001;40:9957-9961.
-
(2001)
Biochemistry
, vol.40
, pp. 9957-9961
-
-
Ivankov, D.N.1
Finkelstein, A.V.2
-
22
-
-
0036384269
-
Simple physical models connect theory and experiment in protein folding kinetics
-
Alm E, Morozov AV, Kortemme T, Baker D. Simple physical models connect theory and experiment in protein folding kinetics. J Mol Biol 2002;322:463-476.
-
(2002)
J Mol Biol
, vol.322
, pp. 463-476
-
-
Alm, E.1
Morozov, A.V.2
Kortemme, T.3
Baker, D.4
-
23
-
-
0037166875
-
Exact solution of the Munoz-Eaton model for protein folding
-
Bruscolini P, Pelizzola A. Exact solution of the Munoz-Eaton model for protein folding. Phys Rev Lett 2002;88:258101.
-
(2002)
Phys Rev Lett
, vol.88
, pp. 258101
-
-
Bruscolini, P.1
Pelizzola, A.2
-
24
-
-
0242330738
-
The importance of explicit chain representation in protein folding models: An examination of Ising-like models
-
Karanicolas J, Brooks CL. The importance of explicit chain representation in protein folding models: an examination of Ising-like models. Proteins 2003;53:740-747.
-
(2003)
Proteins
, vol.53
, pp. 740-747
-
-
Karanicolas, J.1
Brooks, C.L.2
-
25
-
-
0034685604
-
Topological and energetic factors: What determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins
-
Clementi C, Nymeyer H, Onuchic JN. Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins. J Mol Biol 2000;298:937-953.
-
(2000)
J Mol Biol
, vol.298
, pp. 937-953
-
-
Clementi, C.1
Nymeyer, H.2
Onuchic, J.N.3
-
26
-
-
0034319711
-
Sequencing of folding events in Go-type proteins
-
Hoang TX, Cieplak M. Sequencing of folding events in Go-type proteins. J Chem Phys 2000;113:8319-8328.
-
(2000)
J Chem Phys
, vol.113
, pp. 8319-8328
-
-
Hoang, T.X.1
Cieplak, M.2
-
27
-
-
0035818481
-
Constructing, verifying, and dissecting the folding transition state of chymotrypsin inhibitor 2 with all-atom simulations
-
Li L, Shakhnovich EI. Constructing, verifying, and dissecting the folding transition state of chymotrypsin inhibitor 2 with all-atom simulations. Proc Natl Acad Sci USA 2001;98:13014-13018.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 13014-13018
-
-
Li, L.1
Shakhnovich, E.I.2
-
28
-
-
0036785556
-
The origins of asymmetry in the folding transition states of protein L and protein G
-
Karanicolas J, Brooks CL. The origins of asymmetry in the folding transition states of protein L and protein G. Protein Sci 2002;11:2351-2361.
-
(2002)
Protein Sci
, vol.11
, pp. 2351-2361
-
-
Karanicolas, J.1
Brooks, C.L.2
-
29
-
-
0036927818
-
Direct molecular dynamics observation of protein folding transition state ensemble
-
Ding F, Dokholyan NV, Buldyrev SV, Stanley HE, Shakhnovich EI. Direct molecular dynamics observation of protein folding transition state ensemble. Biophys J 2002;83:3525-3532.
-
(2002)
Biophys J
, vol.83
, pp. 3525-3532
-
-
Ding, F.1
Dokholyan, N.V.2
Buldyrev, S.V.3
Stanley, H.E.4
Shakhnovich, E.I.5
-
30
-
-
0037459022
-
Interplay among tertiary contacts, secondary structure formation and side-chain packing in the protein folding mechanism: All-atom representation study of protein L
-
Clementi C, Garcia AE, Onuchic JN. Interplay among tertiary contacts, secondary structure formation and side-chain packing in the protein folding mechanism: all-atom representation study of protein L. J Mol Biol 2003;326:933-954.
-
(2003)
J Mol Biol
, vol.326
, pp. 933-954
-
-
Clementi, C.1
Garcia, A.E.2
Onuchic, J.N.3
-
31
-
-
1842454761
-
Intermediates and the folding of proteins L and G
-
Brown S, Head-Gordon T. Intermediates and the folding of proteins L and G. Protein Sci 2004;13:958-970.
-
(2004)
Protein Sci
, vol.13
, pp. 958-970
-
-
Brown, S.1
Head-Gordon, T.2
-
32
-
-
0035868476
-
Microscopic theory of protein folding rates. I. Fine structure of the free energy profile and folding routes from a variational approach
-
Portman JJ, Takada S, Wolynes PG. Microscopic theory of protein folding rates. I. Fine structure of the free energy profile and folding routes from a variational approach. J Chem Phys 2001;114:5069-5081.
-
(2001)
J Chem Phys
, vol.114
, pp. 5069-5081
-
-
Portman, J.J.1
Takada, S.2
Wolynes, P.G.3
-
33
-
-
0242267529
-
Importance of sequence specificity for predicting protein folding pathways: Perturbed Gaussian chain model
-
Kameda T. Importance of sequence specificity for predicting protein folding pathways: perturbed Gaussian chain model. Proteins 2003;53:616-628.
-
(2003)
Proteins
, vol.53
, pp. 616-628
-
-
Kameda, T.1
-
35
-
-
0000668407
-
Theory of the phase transition between helix and random coil
-
Zimm BH, Bragg JK. Theory of the phase transition between helix and random coil. J Chem Phys 1959;31:526-535.
-
(1959)
J Chem Phys
, vol.31
, pp. 526-535
-
-
Zimm, B.H.1
Bragg, J.K.2
-
36
-
-
0029963345
-
Identification and characterization of the unfolding transition state of chymotrypsin inhibitor 2 by molecular dynamics simulations
-
Li A, Daggett V. Identification and characterization of the unfolding transition state of chymotrypsin inhibitor 2 by molecular dynamics simulations. J Mol Biol 1996;257:412-429.
-
(1996)
J Mol Biol
, vol.257
, pp. 412-429
-
-
Li, A.1
Daggett, V.2
-
37
-
-
0031465967
-
"New view" of protein folding reconciled with the old through multiple unfolding simulations
-
Lazaridis T, Karplus M. "New view" of protein folding reconciled with the old through multiple unfolding simulations. Science 1997;278:1928-1931.
-
(1997)
Science
, vol.278
, pp. 1928-1931
-
-
Lazaridis, T.1
Karplus, M.2
-
38
-
-
0035946940
-
Role of native topology investigated by multiple unfolding simulations of four SH3 domains
-
Gsponer J, Caflisch A. Role of native topology investigated by multiple unfolding simulations of four SH3 domains. J Mol Biol 2001;309:285-298.
-
(2001)
J Mol Biol
, vol.309
, pp. 285-298
-
-
Gsponer, J.1
Caflisch, A.2
-
39
-
-
0036306054
-
Probing the energy landscape of protein folding/unfolding transition states
-
De Jong D, Riley R, Alonso DOV, Daggett V. Probing the energy landscape of protein folding/unfolding transition states. J Mol Biol 2002;319:229-242.
-
(2002)
J Mol Biol
, vol.319
, pp. 229-242
-
-
De Jong, D.1
Riley, R.2
Alonso, D.O.V.3
Daggett, V.4
-
40
-
-
0037093654
-
Native and non-native interactions along protein folding and unfolding pathways
-
Paci E, Vendruscolo M, Karplus M. Native and non-native interactions along protein folding and unfolding pathways. Proteins 2002;47:379-392.
-
(2002)
Proteins
, vol.47
, pp. 379-392
-
-
Paci, E.1
Vendruscolo, M.2
Karplus, M.3
-
41
-
-
0242267532
-
Unfolding of the cold shock protein studied with biased molecular dynamics
-
Morra G, Hodoscek M, Knapp EW. Unfolding of the cold shock protein studied with biased molecular dynamics. Proteins 2003;53:597-606.
-
(2003)
Proteins
, vol.53
, pp. 597-606
-
-
Morra, G.1
Hodoscek, M.2
Knapp, E.W.3
-
42
-
-
0000381972
-
Protein core assembly processes
-
Fiebig KM, Dill KA. Protein core assembly processes. J Chem Phys 1993;98:3475-3487.
-
(1993)
J Chem Phys
, vol.98
, pp. 3475-3487
-
-
Fiebig, K.M.1
Dill, K.A.2
-
44
-
-
0034872511
-
Transition states and the meaning of Φ-values in protein folding kinetics
-
Ozkan SB, Bahar I, Dill KA. Transition states and the meaning of Φ-values in protein folding kinetics. Nature Struct Biol 2001;8:765-769.
-
(2001)
Nature Struct Biol
, vol.8
, pp. 765-769
-
-
Ozkan, S.B.1
Bahar, I.2
Dill, K.A.3
-
45
-
-
0034112774
-
Kinetics, thermodynamics and evolution of non-native interactions in a protein folding nucleus
-
Li L, Mirny AL, Shakhnovich EI. Kinetics, thermodynamics and evolution of non-native interactions in a protein folding nucleus. Nature Struct Biol 2000;7:336-342.
-
(2000)
Nature Struct Biol
, vol.7
, pp. 336-342
-
-
Li, L.1
Mirny, A.L.2
Shakhnovich, E.I.3
-
47
-
-
0038630483
-
Folding rates and low-entropy-loss routes of two-state proteins
-
Weikl TR, Dill KA. Folding rates and low-entropy-loss routes of two-state proteins. J Mol Biol 2003;329:585-598.
-
(2003)
J Mol Biol
, vol.329
, pp. 585-598
-
-
Weikl, T.R.1
Dill, K.A.2
-
48
-
-
0041825363
-
Folding kinetics of two-state proteins: Effect of circularization, permutation, and crosslinks
-
Weikl TR, Dill KA. Folding kinetics of two-state proteins: effect of circularization, permutation, and crosslinks. J Mol Biol 2003;332:953-963.
-
(2003)
J Mol Biol
, vol.332
, pp. 953-963
-
-
Weikl, T.R.1
Dill, K.A.2
-
49
-
-
0034685619
-
A breakdown of symmetry in the folding transition state of protein L
-
Kim DE, Fisher C, Baker D. A breakdown of symmetry in the folding transition state of protein L. J Mol Biol 2000;298:971-984.
-
(2000)
J Mol Biol
, vol.298
, pp. 971-984
-
-
Kim, D.E.1
Fisher, C.2
Baker, D.3
-
50
-
-
0033871567
-
Critical role of β-hairpin formation in protein G folding
-
McCallister EL, Aim E, Baker D. Critical role of β-hairpin formation in protein G folding. Nat Struct Biol 2000;7:669-673.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 669-673
-
-
McCallister, E.L.1
Aim, E.2
Baker, D.3
-
51
-
-
0034677663
-
The folding of an immunoglobulin-like greek key protein is defined by a common-core nucleus and regions constrained by topology
-
Hamill SJ, Steward A, Clarke J. The folding of an immunoglobulin-like greek key protein is defined by a common-core nucleus and regions constrained by topology. J Mol Biol 2000;297:165-178.
-
(2000)
J Mol Biol
, vol.297
, pp. 165-178
-
-
Hamill, S.J.1
Steward, A.2
Clarke, J.3
-
52
-
-
0035793212
-
The folding nucleus of a fibronection type III domain is composed of core residues of the immunoglobolin fold
-
Cota E, Steward A, Fowler SB, Clarke J. The folding nucleus of a fibronection type III domain is composed of core residues of the immunoglobolin fold. J Mol Biol 2001;305:1185-1194.
-
(2001)
J Mol Biol
, vol.305
, pp. 1185-1194
-
-
Cota, E.1
Steward, A.2
Fowler, S.B.3
Clarke, J.4
-
53
-
-
0020997912
-
Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch W, Sander C. Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 1983;22:2577-2637.
-
(1983)
Biopolymers
, vol.22
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
54
-
-
1342268048
-
Cooperativity in two-state protein folding kinetics
-
Weikl TR, Palassini M, Dill KA. Cooperativity in two-state protein folding kinetics. Protein Sci 2004;13:822-829.
-
(2004)
Protein Sci
, vol.13
, pp. 822-829
-
-
Weikl, T.R.1
Palassini, M.2
Dill, K.A.3
-
55
-
-
0017251893
-
Protein-folding dynamics
-
Karplus M, Weaver DL. Protein-folding dynamics. Nature 1976;260:404-406.
-
(1976)
Nature
, vol.260
, pp. 404-406
-
-
Karplus, M.1
Weaver, D.L.2
-
56
-
-
0028327236
-
Protein-folding dynamics: The diffusion-collision model and experimental data
-
Karplus M, Weaver, DL. Protein-folding dynamics: the diffusion-collision model and experimental data. Protein Sci 1994;3:650-668.
-
(1994)
Protein Sci
, vol.3
, pp. 650-668
-
-
Karplus, M.1
Weaver, D.L.2
-
57
-
-
0042631521
-
Contact order dependent protein folding rates: Kinetic consequences of a cooperative interplay between favorable nonlocal interactions and local conformational preferences
-
Kaya H, Chan HS. Contact order dependent protein folding rates: kinetic consequences of a cooperative interplay between favorable nonlocal interactions and local conformational preferences. Proteins 2003;52:524-533.
-
(2003)
Proteins
, vol.52
, pp. 524-533
-
-
Kaya, H.1
Chan, H.S.2
-
58
-
-
0033080081
-
Is protein folding hierarchic II. Folding intermediates and transition states
-
Baldwin RL, Rose GD. Is protein folding hierarchic II. Folding intermediates and transition states. Trends Biochem Sci 1999;24:77-83.
-
(1999)
Trends Biochem Sci
, vol.24
, pp. 77-83
-
-
Baldwin, R.L.1
Rose, G.D.2
-
59
-
-
0028868995
-
The structure of transition state for folding of chymotrypsin inhibitor 2 analysed by protein engineering methods: Evidence for a nucleation-condensation mechanism for protein folding
-
Itzhaki LS, Otzen DE, Fersht AR. The structure of transition state for folding of chymotrypsin inhibitor 2 analysed by protein engineering methods: evidence for a nucleation-condensation mechanism for protein folding. J Mol Biol 1995;254:260-288.
-
(1995)
J Mol Biol
, vol.254
, pp. 260-288
-
-
Itzhaki, L.S.1
Otzen, D.E.2
Fersht, A.R.3
-
60
-
-
0032734515
-
Experiment and theory highlight role of native state topology in SH3 folding
-
Riddle DS, Grantcharova VP, Santiago JV, Alm E, Ruczinski I, Baker D. Experiment and theory highlight role of native state topology in SH3 folding. Nature Struct Biol 1999;6:1016-1024.
-
(1999)
Nature Struct Biol
, vol.6
, pp. 1016-1024
-
-
Riddle, D.S.1
Grantcharova, V.P.2
Santiago, J.V.3
Alm, E.4
Ruczinski, I.5
Baker, D.6
-
61
-
-
0032750509
-
The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved
-
Martinez JC, Serrano L. The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved. Nature Struct Biol 1999;6:1010-1016.
-
(1999)
Nature Struct Biol
, vol.6
, pp. 1010-1016
-
-
Martinez, J.C.1
Serrano, L.2
-
62
-
-
0032515105
-
Structure of the transition state in the folding process of human procarboxypeptidase A2 activation domain
-
Villegas V, Martinez JC, Aviles FX, Serrano L. Structure of the transition state in the folding process of human procarboxypeptidase A2 activation domain. J Mol Biol 1998;283:1027-1036.
-
(1998)
J Mol Biol
, vol.283
, pp. 1027-1036
-
-
Villegas, V.1
Martinez, J.C.2
Aviles, F.X.3
Serrano, L.4
-
63
-
-
0033592876
-
From snapshot to movie: Φ analysis of protein folding transition states taken one step further
-
Ternström T, Mayor U, Akke M, Oliveberg M. From snapshot to movie: Φ analysis of protein folding transition states taken one step further. Proc Natl Acad Sci USA 1999;96:14854-14859.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 14854-14859
-
-
Ternström, T.1
Mayor, U.2
Akke, M.3
Oliveberg, M.4
-
64
-
-
0036293485
-
Conformational plasticity in folding of the split β-α-β protein S6: Evidence for burst-phase disruption of the native state
-
Otzen DE, Oliveberg M. Conformational plasticity in folding of the split β-α-β protein S6: evidence for burst-phase disruption of the native state. J Mol Biol 2002;317:613-627.
-
(2002)
J Mol Biol
, vol.317
, pp. 613-627
-
-
Otzen, D.E.1
Oliveberg, M.2
-
65
-
-
0034984382
-
Mapping the folding pathway of an Immunoglobulin domain: Structural detail from Φ value analysis and movement of the transition state
-
Fowler SB, Clarke J. Mapping the folding pathway of an Immunoglobulin domain: structural detail from Φ value analysis and movement of the transition state. Structure 2001;9:355-366.
-
(2001)
Structure
, vol.9
, pp. 355-366
-
-
Fowler, S.B.1
Clarke, J.2
-
66
-
-
2442683149
-
The folding transition state of the cold shock protein is strongly polarized
-
Garcia-Mira MM, Böhringer D, Schmid FX. The folding transition state of the cold shock protein is strongly polarized. J Mol Biol 2004;339:555-569.
-
(2004)
J Mol Biol
, vol.339
, pp. 555-569
-
-
Garcia-Mira, M.M.1
Böhringer, D.2
Schmid, F.X.3
-
67
-
-
2442659128
-
Scattered Hammond plots reveal second level of site-specific information in protein folding: Φ′(β†)
-
Hedberg L, Oliveberg M. Scattered Hammond plots reveal second level of site-specific information in protein folding: Φ′(β†). Proc Natl Acad Sci USA 2004;101:7606-7611.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 7606-7611
-
-
Hedberg, L.1
Oliveberg, M.2
-
68
-
-
0033015989
-
The formation of a native-like structure containing eight conserved hydrophobic residues is rate limiting in two-state protein folding of ACBP
-
Kragelund BB, Osmark P, Neergaard TB, Schiodt J, Kristiansen K, Knudsen J, Poulsen FM. The formation of a native-like structure containing eight conserved hydrophobic residues is rate limiting in two-state protein folding of ACBP. Nat Struct Biol 1999;9:594-601.
-
(1999)
Nat Struct Biol
, vol.9
, pp. 594-601
-
-
Kragelund, B.B.1
Osmark, P.2
Neergaard, T.B.3
Schiodt, J.4
Kristiansen, K.5
Knudsen, J.6
Poulsen, F.M.7
|