Quantifying anisotropic solute transport in protein crystals using 3-D laser scanning confocal microscopy visualization

Biotechnology and Bioengineering

Volumn 86, Issue 4, 2004, Pages 389-398

  Cvetkovic, A ^a   Straathof, A J J ^a   Hanlon, D N ^b   Van Der Zwaag, S ^a   Krishna, R ^c   Van Der Wielen, L A M ^a  

^a DELFT UNIVERSITY OF TECHNOLOGY   (Netherlands)

^b NETHERLANDS INSTITUTE FOR METALS RESEARCH   (Netherlands)

^c UNIVERSITY OF AMSTERDAM   (Netherlands)

Author keywords

Anisotropy; CLSM; Diffusion; Protein crystals

Indexed keywords

ANISOTROPY; CRYSTALS; DIFFUSION; LASER BEAMS; MORPHOLOGY; OPTICAL MICROSCOPY; PROTEINS; SCANNING;

CONFOCAL LASER SCANNING MICROSCOPY (CLSM); PROTEIN CRYSTALS; SOLUTE TRANSPORT;

BIOTECHNOLOGY;

FLUORESCEIN; LYSOZYME; PROTEIN;

ANISOTROPY; ARTICLE; CONCENTRATION (PARAMETERS); CONFOCAL MICROSCOPY; CRYSTAL; DIFFUSION; DIFFUSION COEFFICIENT; FLUORESCENCE; LASER MICROSCOPY; MORPHOLOGY; QUANTITATIVE ANALYSIS; SOLUTE; THREE DIMENSIONAL IMAGING;

BIOLOGICAL TRANSPORT; CRYSTALLIZATION; DIFFUSION; FLUORESCEIN; FLUORESCENCE POLARIZATION; FLUORESCENT DYES; IMAGING, THREE-DIMENSIONAL; MICROSCOPY, CONFOCAL; MURAMIDASE; TIME FACTORS;

EID: 2442681870     PISSN: 00063592     EISSN: None     Source Type: Journal    
DOI: 10.1002/bit.20067     Document Type: Article

References (55)

1. Ahmed M, Pyle DL. 1999. Investigation of single protein adsorption on ion exchangers using confocal laser scanning microscopy. J Chem Technol Biotechol 74:193-198.
2. Benda A, Benes M, Marecek V, Lhotsky A, Hermens WT, Hof M. 2003. How to determine diffusion coefficients in planar phospholipid systems by confocal fluorescence correlation spectroscopy. Langmuir 19:4120-4126.
3. Bishop WH, Richards FM. 1968. Properties of liquids in small pores. Rates of diffusion of some solutes in cross-linked crystals of beta-lactoglobulin. J Mol Biol 38:315-328.
4. Booth MJ, Wilson T. 2001. Refractive-index-mismatch induced aberrations in single-photon and two-photon microscopy and the use of aberration correction. J Biomed Opt 6:266-272.
5. Booth MJ, Neil MAA, Wilson T. 1998. Aberration correction for confocal imaging in refractive-index-mismatched media. J Microsc 192:90-98.
6. Botin AS, Morozov VN. 1985. Transfer of the low molecular weight compounds in protein crystals and films. Biofizika 32:22-28.
7. Burke MD, Park JO, Srinivasarao M, Khan SA. 2000. Diffusion of macromolecules in polymer solutions and gels: A laser scanning confocal microscopy study. Macromolecules 33:7500-7507.
8. Caylor CL, Speziale S, Kriminski S, Duffy T, Zha CS, Thorne RE. 2001. Measuring the elastic properties of protein crystals by brillouin scattering. J Cryst Growth 232:498-501.
9. Cervelle PB, Cesbron F, Berthou J, Jolles P. 1974. Morphologie et proprietes des cristaux de lysozyme de poule de type quadratique et orthorhombique. Acta Cryst A 30:645-648.
10. Crank J. 1995. Mathematics of diffusion. New York: Oxford Science Publications Clarendon Press.
11. deBeer D, Stoodley P, Lewandowski Z. 1997. Measurement of local diffusion coefficients in biofilms by microinjection and confocal microscopy. Biotechnol Bioeng 53:151-158.
12. Deen WM. 1984. Hindered transport of large molecules in liquid filled pores. AIChE J 33:1409-1425.
13. Diaspro A, Federici F, Robello M. 2002. Influence of refractive-index mismatch in high-resolution three-dimensional confocal microscopy. Appl Opt 41:685-690.
14. Diehl H. 1987. Study on fluorescein-V: The absorbance of fluorescein in the ultraviolet, as a function of pH. Talanta 34:739-741.
15. Doscher MS, Richards FM. 1963. The activity of an enzyme in the crystaline state: Ribonuclease S. J Biol Chem 238:2399-2406.
16. Feher G, Kam Z. 1985. Nucleation and growth of protein crystals: General principles and assays. Meth Enzymol 114:78-112.
17. Fredericks WJ, Hammonds MC, Howard SB, Rosenberger F. 1994. Density, thermal expansivity, viscosity and refractive-index of lysozyme solutions at crystal-growth concentrations. J Cryst Growth 141:183-192.
18. Genzel L, Keilmann F, Martin TP, Winterling G, Yacoby Y, Frohlich H, Makinen MW. 1976. Low-frequency Raman spectra of lysozyme. Biopolymers 15:219-225.
19. Granick S. 1942. Some properties of crystalline guinea pig hemoglobin. J Gen Physiol 25:571-578.
20. Hell S, Reiner G, Cremer C, Stelzer EHK. 1993. Aberrations in confocal fluorescence microscopy induced by mismatches in refractive-index. J Microsc 169:391-405.
21. Hill AV. 1928. The diffusion of oxygen and lactic acid through tissues. Proc R Soc London 104:39-96.
22. Kachalova GS, Lanina NF, Atanasov BP, Morozov VN, Shljapnikova EA, Morozova TY. 1995. The X-ray-fluorescence study of the ionic content of the lysozyme crystals. Biofizika 40:274-282.
23. Kim HB, Hayashi M, Nakatani K, Kitamura N, Sasaki K, Hotta JI, Masuhara H. 1996. In situ measurements of ion-exchange processes in single polymer particles: Laser trapping microspectroscopy and confocal fluorescence microspectroscopy. Anal Chem 68:409-414.
24. Klonis N, Sawyer WH. 1996. Spectral properties of the prototropic forms of fluorescein in aqueous solution. J Fluoresc 6:147-157.
25. Kluijtmans SGJM, de Hoog EHA, Philipse AP. 1998. Self-diffusion of charged colloidal tracer spheres in transparent porous glass media: Effect of ionic strength and pore size. J Chem Phys 108:7469-7477.
26. Lakowicz JR. 1983. Principles of fluorescence spectroscopy. New York: Plenum Press.
27. Linden T, Ljunglof A, Kula MR, Thommes J. 1999. Visualizing two-component protein diffusion in porous adsorbents by confocal scanning laser microscopy. Biotechnol Bioeng 65:622-630.
28. Ljunglof A, Thommes J. 1998. Visualising intraparticle protein transport in porous adsorbents by confocal microscopy. J Chrom A 813:387-395.
29. Ljunglof A, Larsson M, Knuuttila KG, Lindgren J. 2000. Measurement of ligand distribution in individual adsorbent particles using confocal scanning laser microscopy and confocal micro-raman spectroscopy. J Chrom A 893:235-244.
30. Lowry M, He Y, Geng L. 2002. Imaging solute distribution in capillary electrochromatography with laser scanning confocal microscopy. Anal Chem 74:1811-1818.
31. Malmsten M, Xing KZ, Ljunglof A. 1999. Confocal microscopy studies of trypsin immobilization on porous glycidyl methacrylate beads. J Colloid Interface Sci 220:436-442.
32. Margolin AL, Navia MA. 2001. Protein crystals as novel catalytic materials. Angew Chem Int Ed 40:2205-2222.
33. Matthews BW. 1968. Solvent content of protein crystals. J Mol Biol 33:491-497.
34. McRee D. 1999. Practical protein crystallography. San Diego: Academic Press. 187 p.
35. Michielsen S. 2001. Aberrations in confocal spectroscopy of polymeric materials: Erroneous thicknesses and intensities, and loss of resolution. J Appl Polym Sci 81:1662-1669.
36. Morozov VN, Morozova TY. 1992. Mechanical detection of interaction of small specific ligands with proteins and DNA in cross-linked samples. Anal Biochem 201:68-79.
37. Morozov VN, Kachalova GS, Evtodienko VU, Lanina NF, Morozova TY. 1995. Permeability of lysozyme tetragonal crystals to water. Eur Biophys J 24:93-98.
38. Morozova TY, Kachalova GS, Lanina NF, Evtodienko VU, Botin AS, Shlyapnikova EA, Morozov VN. 1996. Ionic conductivity, transference numbers, composition and mobility of ions in cross-linked lysozyme crystals. Biophys Chem 60:1-16.
39. O'Hara P, Goodwin P, Stoddard BL. 1995. Direct measurement of diffusion rates in enzyme crystals by video absorbance spectroscopy. J Appl Cryst 28:829-834.
40. Pastinen O, Visuri K, Leisola M. 1998. Xylitol purification by cross-linked glucose isomerase crystals. Biotechnol Tech 12:557-560.
41. Pastinen O, Jokela J, Eerikainen T, Schwabe T, Leisola M. 2000. Cross-linked glucose isomerase crystals as a liquid chromatographic separation material. Enzyme Microb Technol 26:550-558.
42. Pluta M. 1988. Advanced light microscopy. Principles and basic properties. Amsterdam: Elsevier.
43. Rademann J, Barth M, Brock R, Egelhaaf HJ, Jung G. 2001. Spatially resolved single bead analysis: Homogeneity, diffusion, and adsorption in cross-linked polystyrene. Chem Eur J 7:3884-3889.
44. Reichert U, Linden T, Belfort G, Kula MR, Thommes J. 2002. Visualising protein adsorption to ion-exchange membranes by confocal microscopy. J Membr Sci 199:161-166.
45. Rupley JA. 1969. The comparison of protein structure in the crystal and in solution (pp. 291-352). In: Timasheff SN, Fasman GD (eds.). Structure and stability of biological macromolecules. New York: Marcel Dekker Inc.
46. Sheppard CJR, Torok P. 1997. Effects of specimen refractive index on confocal imaging. J Microsc 185:366-374.
47. Sluyterman LAA, de Graaf MJ. 1969. The activity of papain in the crystalline state. Biochim Biophys Acta 171:277-287.
48. Song Y, Srinivasarao M, Tonelli A, Balik CM, McGregor R. 2000. Laser scanning confocal microscopy study of dye diffusion in fibers. Macromolecules 33:4478-4485.
49. St Clair NL, Navia MA. 1992. Cross-linked enzyme crystals as robust biocatalysts. J Am Chem Soc 114:7314-7316.
50. Steinrauf LK. 1959. Preliminary X-ray data for some new crystalline forms of B-lactoglobulin and hen egg-white lysozyme. Acta Cryst 12:77-79.
51. Velev OD, Kaler EW, Lenhoff AM. 2000. Surfactant diffusion into lysozyme crystal matrices investigated by quantitative fluorescence microscopy. J Phys Chem B 104:9267-9275.
52. Vilenchik LZ, Griffith JP, St Clair N, Navia MA, Margolin AL. 1998. Protein crystals as novel microporous materials. J Am Chem Soc 120:4290-4294.
53. Visser TD, Groen FCA, Brakenhoff GJ. 1991. Absorption and scattering correction in fluorescence confocal microscopy. J Microsc 163:189-200.
54. Vissher K, Brakenhoff GJ, Visser TD. 1994. Fluorescence saturation in confocal microscopy. J Microsc 175:162-165.
55. Westbrook EM, Sigler PB. 1984. Enzymatic function in crystals of delta 5-3-ketosteroid isomerase. Catalytic activity and binding of competitive inhibitors. J Biol Chem 259:9090-9095.