-
1
-
-
8544253956
-
A faux 3′-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay
-
Amrani, N., Ganesan, R., Kervestin, S., Mangus, D., Ghosh, S., and Jacobson, A. 2004. A faux 3′-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay. Nature 432: 112-118.
-
(2004)
Nature
, vol.432
, pp. 112-118
-
-
Amrani, N.1
Ganesan, R.2
Kervestin, S.3
Mangus, D.4
Ghosh, S.5
Jacobson, A.6
-
2
-
-
0029006870
-
The majority of yeast UPF1 co-localizes with polyribosomes in the cytoplasm
-
Atkin, A., Altamura, N., Leeds, P., and Culbertson, M. 1995. The majority of yeast UPF1 co-localizes with polyribosomes in the cytoplasm. Mol. Cell Biol. 6: 611-625.
-
(1995)
Mol. Cell Biol.
, vol.6
, pp. 611-625
-
-
Atkin, A.1
Altamura, N.2
Leeds, P.3
Culbertson, M.4
-
3
-
-
0030826508
-
Relationship between yeast polyribosomes and Upf proteins required for nonsense-mediated mRNA decay
-
Atkin, A., Schenkman, L., Eastham, M., Dahlseid, J., Lelivelt, M., and Culbertson, M. 1997. Relationship between yeast polyribosomes and Upf proteins required for nonsense-mediated mRNA decay. J. Biol. Chem. 272: 22163-22172.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 22163-22172
-
-
Atkin, A.1
Schenkman, L.2
Eastham, M.3
Dahlseid, J.4
Lelivelt, M.5
Culbertson, M.6
-
4
-
-
0033082394
-
RNA surveillance. Unforeseen consequences for gene expression, inherited genetic disorders and cancer
-
Culbertson, M. 1999. RNA surveillance. Unforeseen consequences for gene expression, inherited genetic disorders and cancer. Trends Genet. 15: 74-80.
-
(1999)
Trends Genet.
, vol.15
, pp. 74-80
-
-
Culbertson, M.1
-
5
-
-
0037382643
-
Looking at mRNA decay pathways through the window of molecular evolution
-
Culbertson, M. and Leeds, P. 2003. Looking at mRNA decay pathways through the window of molecular evolution. Curr. Opin. Gen. Dev. 13: 207-214.
-
(2003)
Curr. Opin. Gen. Dev.
, vol.13
, pp. 207-214
-
-
Culbertson, M.1
Leeds, P.2
-
6
-
-
15444373402
-
Cap-binding protein 1-mediated and eukaryotic translation initiation factor 4E-mediated pioneer rounds of translation in yeast
-
Gao, Q., Das, B., Sherman, F., and Maquat, L. 2005. Cap-binding protein 1-mediated and eukaryotic translation initiation factor 4E-mediated pioneer rounds of translation in yeast. Proc. Natl. Acad. Sci. 102: 4258-4263.
-
(2005)
Proc. Natl. Acad. Sci.
, vol.102
, pp. 4258-4263
-
-
Gao, Q.1
Das, B.2
Sherman, F.3
Maquat, L.4
-
7
-
-
0142215475
-
Global analysis of protein expression in yeast
-
Ghaemmaghami, S., Huh, W., Bower, K., Howson, R., Belle, A., Dephoure, N., O'Shea, E., and Weissman, J. 2003. Global analysis of protein expression in yeast. Nature 425: 737-741.
-
(2003)
Nature
, vol.425
, pp. 737-741
-
-
Ghaemmaghami, S.1
Huh, W.2
Bower, K.3
Howson, R.4
Belle, A.5
Dephoure, N.6
O'Shea, E.7
Weissman, J.8
-
8
-
-
0033679905
-
The yeast hnRNP-like protein Hrp1/Nab4 marks a transcript for nonsense-mediated mRNA decay
-
Gonzalez, C., Ruiz-Echevarria, M., Vasudevan, S., Henry, M., and Peltz, S. 2000. The yeast hnRNP-like protein Hrp1/Nab4 marks a transcript for nonsense-mediated mRNA decay. Mol. Cell 5: 489-499.
-
(2000)
Mol. Cell
, vol.5
, pp. 489-499
-
-
Gonzalez, C.1
Ruiz-Echevarria, M.2
Vasudevan, S.3
Henry, M.4
Peltz, S.5
-
9
-
-
0035934166
-
Nonsense-mediated mRNA decay in Saccharomyces cerevisiae
-
Gonzalez, C.I., Bhattacharya, A., Wang, W., and Peltz, S.W. 2001. Nonsense-mediated mRNA decay in Saccharomyces cerevisiae. Gene 274: 15-25.
-
(2001)
Gene
, vol.274
, pp. 15-25
-
-
Gonzalez, C.I.1
Bhattacharya, A.2
Wang, W.3
Peltz, S.W.4
-
10
-
-
0031025296
-
Upf1p, Nmd2p, and Upf3p are interacting components of the yeast nonsense-mediated mRNA decay pathway
-
He, F., Brown, A., and Jacobson, A. 1997. Upf1p, Nmd2p, and Upf3p are interacting components of the yeast nonsense-mediated mRNA decay pathway. Mol. Cell. Biol. 17: 1580-1594.
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 1580-1594
-
-
He, F.1
Brown, A.2
Jacobson, A.3
-
11
-
-
0347416978
-
Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5′ to 3′ mRNA decay pathways in yeast
-
He, F., Li, X., Spatrick, P., Casillo, R., Dong, S., and Jacobson, A. 2003. Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5′ to 3′ mRNA decay pathways in yeast. Mol. Cell 12: 1439-1452.
-
(2003)
Mol. Cell
, vol.12
, pp. 1439-1452
-
-
He, F.1
Li, X.2
Spatrick, P.3
Casillo, R.4
Dong, S.5
Jacobson, A.6
-
12
-
-
0141521567
-
The yeast hnRNP-like protein Hrp1/Nab4 accumulates in the cytoplasm after hyperosmotic stress: A novel Fps1-dependent response
-
Henry, M., Mandel, D., Routson, V., and Henry, P. 2003. The yeast hnRNP-like protein Hrp1/Nab4 accumulates in the cytoplasm after hyperosmotic stress: A novel Fps1-dependent response. Mol. Biol. Cell 14: 3929-3941.
-
(2003)
Mol. Biol. Cell
, vol.14
, pp. 3929-3941
-
-
Henry, M.1
Mandel, D.2
Routson, V.3
Henry, P.4
-
13
-
-
0035823036
-
Evidence for a pioneer round of mRNA translation: mRNAs subject to nonsense-mediated decay in mammalian cells are bound by CBP80 and CPB20
-
Ishigaki, Y., Li, X., Serin, G., and Maquat, L.E. 2001. Evidence for a pioneer round of mRNA translation: mRNAs subject to nonsense-mediated decay in mammalian cells are bound by CBP80 and CPB20. Cell 106: 607-617.
-
(2001)
Cell
, vol.106
, pp. 607-617
-
-
Ishigaki, Y.1
Li, X.2
Serin, G.3
Maquat, L.E.4
-
14
-
-
1642447080
-
Leaky termination at premature stop codons antagonizes nonsense mediated mRNA decay in S. cerevisiae
-
Keeling, K., Lanier, J., Du, M., Salas-Marco, J., Gao, L., Kaenjak-Anageletti, A., and Bedwell, D. 2004. Leaky termination at premature stop codons antagonizes nonsense mediated mRNA decay in S. cerevisiae. RNA 10: 691-703.
-
(2004)
RNA
, vol.10
, pp. 691-703
-
-
Keeling, K.1
Lanier, J.2
Du, M.3
Salas-Marco, J.4
Gao, L.5
Kaenjak-Anageletti, A.6
Bedwell, D.7
-
15
-
-
9344248397
-
Nonsense-mediated decay does not occur within the yeast nucleus
-
Kuperwasser, N., Brogna, S., Dower, K., and Rosbash, M. 2004. Nonsense-mediated decay does not occur within the yeast nucleus. RNA 10: 1907-1915.
-
(2004)
RNA
, vol.10
, pp. 1907-1915
-
-
Kuperwasser, N.1
Brogna, S.2
Dower, K.3
Rosbash, M.4
-
16
-
-
0028027132
-
Initiation factor eIF4E of Saccharomyces cerevisiae
-
Lang, V., Zanchin, I., Lunsdorf, H., Tuite, M., and McCarthy, J. 1994. Initiation factor eIF4E of Saccharomyces cerevisiae. J. Biol. Chem. 269: 6117-6123.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 6117-6123
-
-
Lang, V.1
Zanchin, I.2
Lunsdorf, H.3
Tuite, M.4
McCarthy, J.5
-
17
-
-
0032825494
-
Yeast Upf proteins required for RNA surveillance affect global expression of the yeast transcriptome
-
Lelivelt, M. and Culbertson, M. 1999. Yeast Upf proteins required for RNA surveillance affect global expression of the yeast transcriptome. Mol. Cell. Biol. 19: 6710-6719.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 6710-6719
-
-
Lelivelt, M.1
Culbertson, M.2
-
18
-
-
0032788547
-
Transcriptional elements involved in the repression of ribosomal protein synthesis
-
Li, B., Nierras, C., and Warner, J. 1999. Transcriptional elements involved in the repression of ribosomal protein synthesis. Mol. Cell. Biol. 19: 5393-5404.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 5393-5404
-
-
Li, B.1
Nierras, C.2
Warner, J.3
-
19
-
-
0034043404
-
Upf1p control of nonsense mRNA translation is regulated by Nmd2p and Upf3p
-
Maderazo, A., He, F., Mangus, D., and Jacobson, A. 2000. Upf1p control of nonsense mRNA translation is regulated by Nmd2p and Upf3p. Mol. Cell. Biol. 20: 4591-4603.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 4591-4603
-
-
Maderazo, A.1
He, F.2
Mangus, D.3
Jacobson, A.4
-
20
-
-
0037304372
-
Nonsense-containing mRNAs that accumulate in the absence of a functional nonsense-mediated mRNA decay pathway are destabilized rapidly upon its restitution
-
Maderazo, A., Belk, J., He, F., and Jacobson, A. 2003. Nonsense-containing mRNAs that accumulate in the absence of a functional nonsense-mediated mRNA decay pathway are destabilized rapidly upon its restitution. Mol. Cell. Biol. 23: 842-851.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 842-851
-
-
Maderazo, A.1
Belk, J.2
He, F.3
Jacobson, A.4
-
21
-
-
0035787913
-
Nonsense-mediated mRNA decay: Insights into mechanism from the cellular abundance of human Upf1, Upf2, Upf3, and Upf3X proteins
-
Maquat, L. and Serin, G. 2001. Nonsense-mediated mRNA decay: Insights into mechanism from the cellular abundance of human Upf1, Upf2, Upf3, and Upf3X proteins. Cold Spring Harbor Symp. Quant. Biol. LXVI: 313-320.
-
(2001)
Cold Spring Harbor Symp. Quant. Biol.
, vol.66
, pp. 313-320
-
-
Maquat, L.1
Serin, G.2
-
22
-
-
0037762554
-
An NMD pathway in yeast involving accelerated deadenylation and exosome-mediated 3′→5′ degradation
-
Mitchell, P. and Tollervey, D. 2003. An NMD pathway in yeast involving accelerated deadenylation and exosome-mediated 3′→5′ degradation. Mol. Cell 11: 1405-1413.
-
(2003)
Mol. Cell
, vol.11
, pp. 1405-1413
-
-
Mitchell, P.1
Tollervey, D.2
-
23
-
-
13644266893
-
Upf1p, a highly conserved protein required for nonsensemediated mRNA decay, interacts with the nuclear pore proteins Nup100p and Nup116
-
Nazarenus, T., Cedarberg, R., Bell, R., Cheatle, J., Forch, A., Haifley, A., Hou, A., Wanja Kebaara, B., Shields, C., Stoysich, K., et al. 2005. Upf1p, a highly conserved protein required for nonsensemediated mRNA decay, interacts with the nuclear pore proteins Nup100p and Nup116. Gene 345: 199-212.
-
(2005)
Gene
, vol.345
, pp. 199-212
-
-
Nazarenus, T.1
Cedarberg, R.2
Bell, R.3
Cheatle, J.4
Forch, A.5
Haifley, A.6
Hou, A.7
Wanja Kebaara, B.8
Shields, C.9
Stoysich, K.10
-
24
-
-
0029199471
-
Toward a molecular understanding of the structure and function of the nuclear pore complex
-
Pante, N. and Aebi, U. 1995. Toward a molecular understanding of the structure and function of the nuclear pore complex. Int. Rev. Cytol. 162B: 225-255.
-
(1995)
Int. Rev. Cytol.
, vol.162 B
, pp. 225-255
-
-
Pante, N.1
Aebi, U.2
-
25
-
-
0031720742
-
A factor required for nonsense-mediated mRNA decay in yeast is exported from the nucleus to the cytoplasm by a nuclear export signal sequence
-
Shirley, R., Lelivelt, M., Schenkman, L., Dahlseid, J., and Culbertson, M. 1998. A factor required for nonsense-mediated mRNA decay in yeast is exported from the nucleus to the cytoplasm by a nuclear export signal sequence. J. Cell Sci. 111: 3129-3143.
-
(1998)
J. Cell Sci.
, vol.111
, pp. 3129-3143
-
-
Shirley, R.1
Lelivelt, M.2
Schenkman, L.3
Dahlseid, J.4
Culbertson, M.5
-
26
-
-
0036670621
-
Nuclear import of Upf3p is mediated by importin-α/β and export to the cytoplasm is required for a functional nonsensemediated mRNA decay pathway in yeast
-
Shirley, R., Ford, A., Richards, R., Albertini, M., and Culbertson, M. 2002. Nuclear import of Upf3p is mediated by importin-α/β and export to the cytoplasm is required for a functional nonsensemediated mRNA decay pathway in yeast. Genetics 161: 1465-1482.
-
(2002)
Genetics
, vol.161
, pp. 1465-1482
-
-
Shirley, R.1
Ford, A.2
Richards, R.3
Albertini, M.4
Culbertson, M.5
-
27
-
-
0041524062
-
Interaction between Ski7p and Upf1p is required for nonsense-mediated 3′-to-5′ mRNA decay in yeast
-
Takahashi, S., Araki, Y., Sakuno, T., and Katada, T. 2003. Interaction between Ski7p and Upf1p is required for nonsense-mediated 3′-to-5′ mRNA decay in yeast. EMBO J. 22: 3951-3959.
-
(2003)
EMBO J.
, vol.22
, pp. 3951-3959
-
-
Takahashi, S.1
Araki, Y.2
Sakuno, T.3
Katada, T.4
-
28
-
-
0035865408
-
The role of Upf proteins in modulating the translation read-through of nonsense-containing transcripts
-
Wang, W., Czaplinski, K., Rao, Y., and Peltz, S.W. 2001. The role of Upf proteins in modulating the translation read-through of nonsense-containing transcripts. EMBO J. 20: 880-890.
-
(2001)
EMBO J.
, vol.20
, pp. 880-890
-
-
Wang, W.1
Czaplinski, K.2
Rao, Y.3
Peltz, S.W.4
-
29
-
-
0033229970
-
The economics of ribosome biosynthesis in yeast
-
Warner, J.R. 1999. The economics of ribosome biosynthesis in yeast. Trends Biochem. Sci. 24: 437-440.
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 437-440
-
-
Warner, J.R.1
-
30
-
-
0036591883
-
Nucleocytoplasmic transport: Cargo trafficking across the border
-
Weis, K. 2002. Nucleocytoplasmic transport: Cargo trafficking across the border. Curr. Opin. Cell Biol. 14: 328-335.
-
(2002)
Curr. Opin. Cell Biol.
, vol.14
, pp. 328-335
-
-
Weis, K.1
-
31
-
-
0033229867
-
An internal open reading frame triggers nonsense-mediated decay of the yeast SPT10 mRNA
-
Welch, E. and Jacobson, A. 1999. An internal open reading frame triggers nonsense-mediated decay of the yeast SPT10 mRNA. EMBO J. 18: 6134-6145.
-
(1999)
EMBO J.
, vol.18
, pp. 6134-6145
-
-
Welch, E.1
Jacobson, A.2
-
32
-
-
0028945345
-
Identification and characterization of a sequence motif involved in nonsense-mediated mRNA decay
-
Zhang, S., Ruiz-Echevarria, M., Quan, Y., and Peltz, S. 1995. Identification and characterization of a sequence motif involved in nonsense-mediated mRNA decay. Mol. Cell. Biol. 15: 2231-2244.
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 2231-2244
-
-
Zhang, S.1
Ruiz-Echevarria, M.2
Quan, Y.3
Peltz, S.4
|