The yicM (nepI) gene of Escherichia coli encodes a major facilitator superfamily protein involved in efflux of purine ribonucleosides

FEMS Microbiology Letters

Volumn 250, Issue 1, 2005, Pages 39-47

  Gronskiy, Sergey V ^a   Zakataeva, Natalia P ^a   Vitushkina, Maria V ^a   Ptitsyn, Leonid R ^a   Altman, Irina B ^a   Novikova, Anna E ^a   Livshits, Vitaliy A ^a  

^a Ajinomoto Genetika Research Institute   (Russian Federation)

Author keywords

Escherichia coli; Nucleoside efflux; yicM

Indexed keywords

CARBON; GUANOSINE; INOSINE; MERCAPTOPURINE; NEBULARINE; PURINE NUCLEOSIDE PHOSPHORYLASE;

ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; CONTROLLED STUDY; ESCHERICHIA COLI; GROWTH RATE; NONHUMAN; PRIORITY JOURNAL; TRANSCRIPTION INITIATION SITE; YICM GENE;

6-MERCAPTOPURINE; BASE SEQUENCE; BIOLOGICAL TRANSPORT, ACTIVE; CLONING, MOLECULAR; CULTURE MEDIA; DNA, BACTERIAL; DRUG RESISTANCE, BACTERIAL; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION; GENES, BACTERIAL; INOSINE; MOLECULAR SEQUENCE DATA; NUCLEOTIDE TRANSPORT PROTEINS; PROTEIN BIOSYNTHESIS; PURINE NUCLEOSIDES; PURINE-NUCLEOSIDE PHOSPHORYLASE; RIBONUCLEOSIDES; TRANSCRIPTION, GENETIC;

ESCHERICHIA COLI;

EID: 23744453356     PISSN: 03781097     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.femsle.2005.06.051     Document Type: Article

References (28)

1. S. Teshiba, and A. Furuya Production of nucleotides and nucleosides by fermentation Jap. Technol. Rev. vol. 3 1989 OPA Amsterdam 99
2. H. Matsui, H. Kawasaki, M. Shimaoka, and O. Kurahashi Investigation of various genotype characteristics for inosine accumulation in Escherichia coli W3110 Biosci. Biotechnol. Biochem. 65 2001 570 578
3. A. Munch-Petersen, and B. Mygind Transport of nucleic acid precursors A. Munch-Petersen Metabolism of Nucleotides, Nucleosides and Nucleobases in Microorganisms 1983 Academic Press London 259 305
4. M.H.H. Norholm, and G. Dandanell Specificity and topology of the Escherichia coli xanthosine permease, a representative of the NHS subfamily of the major facilitator superfamily J. Bacteriol. 183 2001 4900 4904
5. T. Dassler, T. Maier, C. Winterhalter, and A. Bock Identification of a major facilitator protein from Escherichia coli involved in efflux of metabolites of the cysteine pathway Mol. Microbiol. 36 2000 1101 1112
6. V.A. Livshits, N.P. Zakataeva, V.V. Aleshin, and M.V. Vitushkina Identification and characterization of the new gene rhtA involved in threonine and homoserine efflux in Escherichia coli Res. Microbiol. 154 2003 123 135
7. BAD promoter J. Bacteriol. 181 1999 2185 2191
8. J.Y. Liu, P.F. Miller, M. Gosink, and E.R. Olson The identification of new family of sugar efflux pumps in Escherichia coli Mol. Microbiol. 31 1999 1845 1851
9. L.E. Johansen, P. Nygaard, C. Lassen, Y. Agerso, and H.H. Saxild Definition of a second Bacillus subtilis pur regulon comprising the pur and xpt-pbuX operons plus pbuG, nupG (yxjA), and pbuE (ydhL) J. Bacteriol. 185 2003 5200 5209
10. N.P. Zakataeva, V.V. Aleshin, I.L. Tokmakova, P.V. Troshin, and V.A. Livshits The novel transmembrane Escherichia coli proteins involved in the amino acid efflux FEBS Lett. 452 1999 228 232
11. J. Sambrook, E.F. Fritsch, and T. Maniatis Molecular Cloning: A Laboratory Manual second ed. 1989 Cold Spring Harbor Laboratory Press Cold Spring Harbor, NY
12. M.S. Guyer, R.E. Reed, T. Steitz, and K.B. Low Identification of a sex-factor-affinity site in E. coli as gamma delta Cold Spr. Harb. Symp. Quant. Biol. 45 1981 135 140
13. K.A. Datsenko, and B.L. Wanner One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products Proc. Natl. Acad. Sci. USA 97 2000 6640 6645
14. E.A. Groisman, and M.J. Casadaban Mini-Mu bacteriophage with plasmid replicons for in vivo cloning and lac gene fusing J. Bacteriol. 168 1986 357 364
15. J. Vieira, and J. Messing New pUC-derived cloning vectors with different selectable markers and DNA replication origins Gene 100 1991 189 194
16. J.H. Miller Experiments in Molecular Genetics 1972 Cold Spring Harbor Laboratory Press Cold Spring Harbor, NY
17. Livshits, V.A., Doroshenko, V.G., Mashko, C.V., Akhverdyan, V.Z. and Kozlov, Y.I. (2001) Amino acid producing strains belonging to the genus Escherichia and method for producing amino acid, Ajinomoto Co., Ltd., European patent 1149911A2, (2001) October 31 2001.
18. J.K. Ichikawa, C. Li, J. Fu, and S. Clarke A gene at 59 minutes on the Escherichia coli chromosome encodes a lipoprotein with unusual amino acid repeat sequences J. Bacteriol. 176 1994 1630 1638
19. H. Nikaido Multidrug efflux pumps of gram-negative bacteria J. Bacteriol. 178 1996 5853 5859
20. C. Petersen Inhibition of cellular growth by increased guanine nucleotide pools J. Biol. Chem. 274 1999 5348 5356
21. S.S. Pao, I.T. Paulsen, and M.H. Saier Jr. Major facilitator superfamily Microbiol. Mol. Biol. Rev. 1 1998 1 34
22. Q. Ren, K.H. Kang, and I.T. Paulsen TransportDB: a relational database of cellular membrane transport systems Nucl. Acids Res. 32 2004 D284 D288
23. R.L. Tatusov, N.D. Fedorova, J.D. Jackson, A.R. Jacobs, B. Kiryutin, E.V. Koonin, D.M. Krylov, R. Mazumder, S.L. Mekhedov, A.N. Nikolskaya, B.S. Rao, S. Smirnov, A.V. Sverdlov, S. Vasudevan, Y.I. Wolf, J.J. Yin, and D.A. Natale The COG database: an updated version includes eukaryotes BMC Bioinformat. 11 2003 41
24. P. Nygaard Utilization of preformed purine bases and nucleosides A. Munch-Petersen Metabolism of Nucleotides, Nucleosides and Nucleobases in Microorganisms 1983 Academic Press London 27 93
25. U. Rinas, K. Hellmuth, R. Kang, A. Seeger, and H. Schlieker Entry of Escherichia coli into stationary phase is indicated by endogenous and exogenous accumulation of nucleobases Appl. Environ. Microbiol. 61 1995 4147 4151
26. M.A. Cabrita, S.A. Baldwin, J.D. Young, and C.E. Cass Molecular biology and regulation of nucleoside and nucleobase transporter proteins in eukaryotes and prokaryotes Biochem. Cell. Biol. 80 2002 623 638
27. G.W. Koszalka, J. Vanhooke, S.A. Short, and W.W. Hall Purification and properties of inosine-guanosine phosphorylase from Escherichia coli K-12 J. Bacteriol. 170 1988 3493 3498
28. C. Petersen, and L.B. Moller The RihA, RihB, and RihC ribonucleoside hydrolases of Escherichia coli. Substrate specificity, gene expression, and regulation J. Biol. Chem. 276 2001 884 894