메뉴 건너뛰기




Volumn 339, Issue 2, 2004, Pages 405-412

Fitness increase of memory genomes in a viral quasispecies

Author keywords

fitness; FMDV, foot and mouth disease virus; foot and mouth disease virus; p, passage number; polyadenylate tract; quasispecies memory; Red Queen hypothesis

Indexed keywords

ANIMAL CELL; ARTICLE; FITNESS; FOOT AND MOUTH DISEASE VIRUS; GENOME; MEMORY; MEMORY CELL; MUTANT; NONHUMAN; POPULATION; PRIORITY JOURNAL; VIRUS GENOME; VIRUS INFECTION;

EID: 2342565012     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2004.03.061     Document Type: Article
Times cited : (37)

References (31)
  • 2
    • 0032794285 scopus 로고    scopus 로고
    • Antigenic properties and population stability of a foot-and-mouth disease virus with an altered Arg-Gly-Asp receptor-recognition motif
    • Ruíz-Jarabo C.M., Sevilla N., Dávila M., Gómez-Mariano G., Baranowski E., Domingo E. Antigenic properties and population stability of a foot-and-mouth disease virus with an altered Arg-Gly-Asp receptor-recognition motif. J. Gen. Virol. 80:1999;1899-1909
    • (1999) J. Gen. Virol. , vol.80 , pp. 1899-1909
    • Ruíz-Jarabo, C.M.1    Sevilla, N.2    Dávila, M.3    Gómez-Mariano, G.4    Baranowski, E.5    Domingo, E.6
  • 3
    • 0024578406 scopus 로고
    • The three-dimensional structure of foot-and-mouth disease virus at 2.9 Å resolution
    • Acharya R., Fry E., Stuart D., Fox G., Rowlands D., Brown F. The three-dimensional structure of foot-and-mouth disease virus at 2.9 Å resolution. Nature. 337:1989;709-716
    • (1989) Nature , vol.337 , pp. 709-716
    • Acharya, R.1    Fry, E.2    Stuart, D.3    Fox, G.4    Rowlands, D.5    Brown, F.6
  • 4
    • 0141737150 scopus 로고    scopus 로고
    • Editor of virus research FMD special
    • Rowlands, D. J. (2003). Editor of virus research FMD special. Virus Res. 91, 1-161.
    • (2003) Virus Res. , vol.91 , pp. 1-161
    • Rowlands, D.J.1
  • 6
    • 0141862176 scopus 로고    scopus 로고
    • Synchronous loss of quasispecies memory in parallel viral lineages: A deterministic feature of viral quasispecies
    • Ruíz-Jarabo C.M., Miller E., Gómez-Mariano G., Domingo E. Synchronous loss of quasispecies memory in parallel viral lineages: a deterministic feature of viral quasispecies. J. Mol. Biol. 333:2003;553-563
    • (2003) J. Mol. Biol. , vol.333 , pp. 553-563
    • Ruíz-Jarabo, C.M.1    Miller, E.2    Gómez-Mariano, G.3    Domingo, E.4
  • 8
    • 0343867213 scopus 로고    scopus 로고
    • Molecular intermediates of fitness gain of an RNA virus: Characterization of a mutant spectrum by biological and molecular cloning
    • Arias A., Lázaro E., Escarmís C., Domingo E. Molecular intermediates of fitness gain of an RNA virus: characterization of a mutant spectrum by biological and molecular cloning. J. Gen. Virol. 82:2001;1049-1060
    • (2001) J. Gen. Virol. , vol.82 , pp. 1049-1060
    • Arias, A.1    Lázaro, E.2    Escarmís, C.3    Domingo, E.4
  • 9
    • 15544373334 scopus 로고
    • Sequence space and quasispecies distribution
    • E. Domingo, P. Ahlquist, & J.J. Holland. Boca Raton, FL: CRC Press
    • Eigen M., Biebricher C.K. Sequence space and quasispecies distribution. Domingo E., Ahlquist P., Holland J.J. RNA Genetics. RNA Genetics. vol. 3:1988;211-245 CRC Press, Boca Raton, FL
    • (1988) RNA Genetics RNA Genetics , vol.3 , pp. 211-245
    • Eigen, M.1    Biebricher, C.K.2
  • 10
    • 17144461473 scopus 로고    scopus 로고
    • Multiple molecular pathways for fitness recovery of an RNA virus debilitated by operation of Muller's ratchet
    • Escarmís C., Dávila M., Domingo E. Multiple molecular pathways for fitness recovery of an RNA virus debilitated by operation of Muller's ratchet. J. Mol. Biol. 285:1999;495-505
    • (1999) J. Mol. Biol. , vol.285 , pp. 495-505
    • Escarmís, C.1    Dávila, M.2    Domingo, E.3
  • 11
    • 0036301071 scopus 로고    scopus 로고
    • Resistance to extinction of low fitness virus subjected to plaque-to-plaque transfers: Diversification by mutation clustering
    • Escarmís C., Gómez-Mariano G., Dávila M., Lázaro E., Domingo E. Resistance to extinction of low fitness virus subjected to plaque-to-plaque transfers: diversification by mutation clustering. J. Mol. Biol. 315:2002;647-661
    • (2002) J. Mol. Biol. , vol.315 , pp. 647-661
    • Escarmís, C.1    Gómez-Mariano, G.2    Dávila, M.3    Lázaro, E.4    Domingo, E.5
  • 13
    • 0017038871 scopus 로고
    • The proportion of revertant and mutant phage in a growing population, as a function of mutation and growth rate
    • Batschelet E., Domingo E., Weissmann C. The proportion of revertant and mutant phage in a growing population, as a function of mutation and growth rate. Gene. 1:1976;27-32
    • (1976) Gene , vol.1 , pp. 27-32
    • Batschelet, E.1    Domingo, E.2    Weissmann, C.3
  • 14
    • 0022384429 scopus 로고
    • Kinetics of RNA replication: Competition and selection among self-replicating RNA species
    • Biebricher C.K., Eigen M., Gardiner W.C. Jr. Kinetics of RNA replication: competition and selection among self-replicating RNA species. Biochemistry. 24:1985;6550-6560
    • (1985) Biochemistry , vol.24 , pp. 6550-6560
    • Biebricher, C.K.1    Eigen, M.2    Gardiner Jr., W.C.3
  • 15
    • 84884768224 scopus 로고    scopus 로고
    • Mutation, competition and selection as measured with small RNA molecules
    • E. Domingo, R.G. Webster, & J.J. Holland. San Diego: Academic Press
    • Biebricher C.K. Mutation, competition and selection as measured with small RNA molecules. Domingo E., Webster R.G., Holland J.J. Origin and Evolution of Viruses. 1999;65-85 Academic Press, San Diego
    • (1999) Origin and Evolution of Viruses , pp. 65-85
    • Biebricher, C.K.1
  • 16
    • 0034630910 scopus 로고    scopus 로고
    • Viruses at the edge of adaptation
    • Domingo E. Viruses at the edge of adaptation. Virology. 270:2000;251-253
    • (2000) Virology , vol.270 , pp. 251-253
    • Domingo, E.1
  • 17
    • 0038499539 scopus 로고    scopus 로고
    • Memory in retroviral quasispecies: Experimental evidence and theoretical model for human immunodeficiency virus
    • Briones C., Domingo E., Molina-Paris C. Memory in retroviral quasispecies: experimental evidence and theoretical model for human immunodeficiency virus. J. Mol. Biol. 331:2003;213-229
    • (2003) J. Mol. Biol. , vol.331 , pp. 213-229
    • Briones, C.1    Domingo, E.2    Molina-Paris, C.3
  • 19
    • 2942549839 scopus 로고    scopus 로고
    • Phenotypic mixing and hiding may contribute to memory in viral quasispecies
    • Wilke C.O., Novella I.S. Phenotypic mixing and hiding may contribute to memory in viral quasispecies. BMC Microbiol. 3:2003;11
    • (2003) BMC Microbiol. , vol.3 , pp. 11
    • Wilke, C.O.1    Novella, I.S.2
  • 21
    • 0036340533 scopus 로고    scopus 로고
    • Modeling viral genome fitness evolution associated with serial bottleneck events: Evidence of stationary states of fitness
    • Lázaro E., Escarmís C., Domingo E., Manrubia S.C. Modeling viral genome fitness evolution associated with serial bottleneck events: evidence of stationary states of fitness. J. Virol. 76:2002;8675-8681
    • (2002) J. Virol. , vol.76 , pp. 8675-8681
    • Lázaro, E.1    Escarmís, C.2    Domingo, E.3    Manrubia, S.C.4
  • 22
    • 0141633021 scopus 로고    scopus 로고
    • Resistance of virus to extinction on bottleneck passages: Study of a decaying and fluctuating pattern of fitness loss
    • Lazaro E., Escarmis C., Perez-Mercader J., Manrubia S.C., Domingo E. Resistance of virus to extinction on bottleneck passages: study of a decaying and fluctuating pattern of fitness loss. Proc. Natl Acad. Sci. USA. 100:2003;10830-10835
    • (2003) Proc. Natl Acad. Sci. USA , vol.100 , pp. 10830-10835
    • Lazaro, E.1    Escarmis, C.2    Perez-Mercader, J.3    Manrubia, S.C.4    Domingo, E.5
  • 23
    • 0002027029 scopus 로고
    • A new evolutionary law
    • Van Valen L. A new evolutionary law. Evol. Theory. 1:1973;1-30
    • (1973) Evol. Theory , vol.1 , pp. 1-30
    • Van Valen, L.1
  • 25
    • 0027520635 scopus 로고
    • Distinctive features of foot-and-mouth disease virus, a member of the picornavirus family; Aspects of virus protein synthesis, protein processing and structure
    • Belsham G.J. Distinctive features of foot-and-mouth disease virus, a member of the picornavirus family; aspects of virus protein synthesis, protein processing and structure. Prog. Biophys. Mol. Biol. 60:1993;241-260
    • (1993) Prog. Biophys. Mol. Biol. , vol.60 , pp. 241-260
    • Belsham, G.J.1
  • 27
    • 0025886357 scopus 로고
    • Fitness alteration of foot-and-mouth disease virus mutants: Measurement of adaptability of viral quasispecies
    • Martínez M.A., Carrillo C., González-Candelas F., Moya A., Domingo E., Sobrino F. Fitness alteration of foot-and-mouth disease virus mutants: measurement of adaptability of viral quasispecies. J. Virol. 65:1991;3954-3957
    • (1991) J. Virol. , vol.65 , pp. 3954-3957
    • Martínez, M.A.1    Carrillo, C.2    González-Candelas, F.3    Moya, A.4    Domingo, E.5    Sobrino, F.6
  • 29
    • 0038278911 scopus 로고    scopus 로고
    • Mutagenesis versus inhibition in the efficiency of extinction of foot-and-mouth disease virus
    • Pariente N., Airaksinen A., Domingo E. Mutagenesis versus inhibition in the efficiency of extinction of foot-and-mouth disease virus. J. Virol. 77:2003;7131-7138
    • (2003) J. Virol. , vol.77 , pp. 7131-7138
    • Pariente, N.1    Airaksinen, A.2    Domingo, E.3
  • 30
    • 0020544508 scopus 로고
    • Multiple genetic variants arise in the course of replication of foot-and-mouth disease virus in cell culture
    • Sobrino F., Dávila M., Ortín J., Domingo E. Multiple genetic variants arise in the course of replication of foot-and-mouth disease virus in cell culture. Virology. 128:1983;310-318
    • (1983) Virology , vol.128 , pp. 310-318
    • Sobrino, F.1    Dávila, M.2    Ortín, J.3    Domingo, E.4
  • 31
    • 0032842518 scopus 로고    scopus 로고
    • Genomic nucleotide sequence of a foot-and-mouth disease virus clone and its persistent derivatives. Implications for the evolution of viral quasispecies during a persistent infection
    • Toja M., Escarmis C., Domingo E. Genomic nucleotide sequence of a foot-and-mouth disease virus clone and its persistent derivatives. Implications for the evolution of viral quasispecies during a persistent infection. Virus Res. 64:1999;161-171
    • (1999) Virus Res. , vol.64 , pp. 161-171
    • Toja, M.1    Escarmis, C.2    Domingo, E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.