Gene expression profiles of different clinical stages of colorectal carcinoma: Toward a molecular genetic understanding of tumor progression

International Journal of Colorectal Disease

Volumn 20, Issue 5, 2005, Pages 391-402

  Friederichs, Jan ^a   Rosenberg, Robert ^a   Mages, Joerg ^a   Janssen, Klaus Peter ^a   Maeckl, Christian ^a   Nekarda, Hjalmar ^a   Holzmann, Bernhard ^a   Siewert, Joerg Ruediger ^a  

^a TECHNICAL UNIVERSITY OF MUNICH   (Germany)

Author keywords

Colorectal cancer; Gene expression; Oligonucleotide microarray; Transcriptome

Indexed keywords

ADULT; AGED; ANGIOGENESIS; ARTICLE; CANCER CLASSIFICATION; CANCER GENETICS; CANCER STAGING; CELL ADHESION; CELL DIVISION; CLINICAL ARTICLE; COLORECTAL CANCER; CONTROLLED STUDY; CORRELATION ANALYSIS; DNA MICROARRAY; DOWN REGULATION; FEMALE; GENE CLUSTER; GENE CONTROL; GENE EXPRESSION PROFILING; GENE IDENTIFICATION; HISTOPATHOLOGY; HUMAN; HUMAN TISSUE; MALE; METASTASIS; MOLECULAR GENETICS; PRIORITY JOURNAL; RNA HYBRIDIZATION; RNA ISOLATION; RNA TRANSCRIPTION; SIGNAL TRANSDUCTION; TUMOR GROWTH;

ADULT; AGED; AGED, 80 AND OVER; COLORECTAL NEOPLASMS; DISEASE PROGRESSION; DOWN-REGULATION; FEMALE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, NEOPLASTIC; HUMANS; INTESTINAL MUCOSA; LYMPHATIC METASTASIS; MALE; MIDDLE AGED; MOLECULAR BIOLOGY; NEOPLASM STAGING; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; RNA, NEOPLASM; UP-REGULATION;

EID: 23144462016     PISSN: 01791958     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00384-004-0722-1     Document Type: Article

References (30)

1. Pohl C, Hombach A, Kruis W (2000) Chronic inflammatory bowel disease and cancer. Hepatogastroenterology 47:57-70 1:STN:280:DC%2BD3c7lsFWktA%3D%3D
2. Muto T, Bussey HJ, Morson BC (1975) The evolution of cancer of the colon and rectum. Cancer 36:2251-2270 1:STN:280:CSmD1M%2FhvFA%3D
3. Forrester K, Almoguera C, Han K, Grizzle WE, Perucho M (1987) Detection of high incidence of K-ras oncogenes during human colon tumorigenesis. Nature 327:298-303 10.1038/327298a0
4. Baker SJ, Fearon ER, Nigro JM, Hamilton SR, Preisinger AC, Jessup JM, van Tuinen P, Ledbetter DH, Barker DF, Nakamura Y, White R, Vogelstein B (1989) Chromosome 17 deletions and p53 gene mutations in colorectal carcinomas. Science 244:217-221 1:CAS:528:DyaL1MXit12gt74%3D
5. Nishisho I, Nakamura Y, Miyoshi Y, Miki Y, Ando H, Horii A, Koyama K, Utsunomiya J, Baba S, Hedge P (1991) Mutation of chromosome 5q21 genes in FAP and colorectal cancer patients. Science 253:665-669 1:CAS:528:DyaK3MXmt1Gitr0%3D
6. Thibodeau SN, Bren G, Schaid D (1993) Microsatellite instability in cancer of the proximal colon. Science 260:816-819 1:CAS:528:DyaK3sXkt1GlsLs%3D
7. Notterman DA, Alon U, Sierk AJ, Levine AJ (2001) Transcriptional gene expression profiles of colorectal adenoma, adenocarcinoma and normal tissue examined by oligonucleotide arrays. Cancer Res 61:3124-3130 1:CAS:528:DC%2BD3MXivFGqsb8%3D
8. Lin Y, Furukawa Y, Tsunoda T, Yue C, Yang K, Nakamura Y (2002) Molecular diagnosis of colorectal tumors by expression profiles of 50 genes expressed differentially in adenomas and carcinomas. Oncogene 21:4120-4128 10.1038/sj.onc.1205518
9. Alon U, Barkai N, Notterman DA, Gish K, Ybarra S, Mack D, Levine AJ (1999) Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays. Proc Natl Acad Sci 96:6745-6750 10.1073/pnas.96.12.6745
10. Birkenkamp-Demtroder K, Christensen LL, Olesen SH, Frederiksen CM, Laiho P, Aaltonen LA, Laurberg S, Sorensen FB, Hagemann R, Orntoft TF (2002) Gene expression in colorectal cancer. Cancer Res 62:4352-4363 1:CAS:528:DC%2BD38XlvFeluro%3D
11. Kwon HC, Kim SH, Roh MS, Kim JS, Lee HS, Choi HJ, Jeong JS, Kim HJ, Hwang TH (2004) Gene expression profiling in lymph node-positive and lymph node-negative colorectal cancer. Dis Colon Rectum 47:141-152 10.1007/s10350-003-0032-7
12. Frederiksen CM, Knudsen S, Laurberg S, Orntoft TF (2003) Classification of Dukes B and C colorectal cancers using expression arrays. J Cancer Res Clin Oncol 129:263-271 12750996
13. Matrisian LM, Cunha GR, Mohla S (2001) Epithelial-stromal interactions and tumor progression: Meeting summary and future directions. Cancer Res 61:3844-3846 1:CAS:528:DC%2BD3MXjsFCnsrw%3D
14. Martin-Lluesma S, Stucke VM, Nigg EA (2002) Role of Hec1 in spindle checkpoint signalling and kinetochore recruitment of MAD1/MAD2. Science 297:2267-2270 10.1126/science.1075596
15. Wang X, Jin DJ, Ng RW, Feng H, Wong YC, Cheung AL, Tsao SW (2002) Significance of MAD2 expression to mitotic checkpoint control of ovarian cancer cells. Cancer Res 62:1662-1668 1:CAS:528:DC%2BD38XisVSisLY%3D
16. Behrens P, Brinkmann U, Wellmann A (2003) CSE1L/CAS: Its role in proliferation and apoptosis. Apoptosis 8:39-44 10.1023/A:1021644918117
17. O'Connell MJ, Krien MJ, Hunter T (2003) Never say never. The NIMA-related protein kinases in mitotic control. Trends Cell Biol 13:221-228 10.1016/S0962-8924(03)00056-4
18. Liu ST, Hittle JC, Jablonski SA, Campbell MS, Yoda K, Yen TJ (2003) Human CENP-I specifies localization of CENP-F, MAD1 and MAD2 to kinetochores and is essential for mitosis. Nat Cell Biol 5:341-345 10.1038/ncb953
19. Saha S, Bardelli A, Buckhaults P, Velculescu VE, Rago C, St Croix B, Romans KE, Chot MA, Lengauer C, Kinzler KW, Vogelstein B (2001) A phosphatase associated with metastasis of colorectal cancer. Science 294:1343-1346 10.1126/science.1065817
20. Agrawal D, Chen T, Irby R, Quackenbush J, Chanbers AF, Szabo M, Cantor A, Coppola D, Yeatman TJ (2002) Osteopontin identified as lead marker of colon cancer progression, using pooled sample expression profiling. J Natl Cancer Inst 94:513-521 1:CAS:528:DC%2BD38Xjt1Ciurw%3D
21. Hall A (1998) Rho GTPases and the actin cytoskeleton. Science 279:509-514 10.1126/science.279.5350.509
22. Bourguignon LY, Zhu H, Shao L, Zhu D, Chen YW (1999) Rho-kinase (ROK) promotes CD44v(3,8-10)-ankyrin interaction and tumor cell migration in metastatic breast cancer cells. Cell Motil Cytoskeleton 43:269-287 10.1002/(SICI)1097-0169(1999)43:4<269::AID-CM1>3.0.CO;2-5
23. Fritz G, Just I, Kaina B (1999) Rho GTPases are over-expressed in human tumors. Int J Cancer 81:682-687 10.1002/ (SICI)1097-0215(19990531)81:5<682::AID-IJC2>3.0.CO;2-B
24. Fukuda T, Kido A, Kajuno K, Tsutsumi M, Miyauchi Y, Tsujiuchi T, Konishi Y, Hino O (1999) Cloning of differentially expressed genes in highly and low metastatic rat osteosarcomas by a modified cDNA-AFLP method. Biochem Biophys Res Commun 261:35-40 10.1006/bbrc.1999.0997
25. Pardo J, Balkow S, Anel A, Simon MM (2002) Granzymes are essential for natural killer cell-mediated and perf-facilitated tumor control. Eur J Immunol 32:2881-2887 10.1002/ 1521-4141(2002010)32:10<2881::AID-IMMU2881>3.0.CO;2-K
26. Mulder WM, Bloemena E, Stukart MJ, Kummer JA, Wagstaff J, Scheper RJ (1997) T cell receptor-zeta and granzyme B expression in mononuclear cell infiltrates in normal colon mucosa and colon carcinoma. Gut 40:113-119 1:CAS:528:DyaK2sXhvVeiu7Y%3D
27. Hippo Y, Taniguchi H, Tsutsumi S, Machida N, Chong J, Fukayama M, Kodama T, Aburatani H (2002) Global gene expression analysis of gastric cancer by oligonucleotide microarrays. Cancer Res 62:233-240 1:CAS:528:DC%2BD38XntV2htQ%3D%3D
28. Olschwang S, Hamelin R, Laurent-Puig P, Thuille B, De Rycke Y, Li YJ, Muzeau F, Girodet J, Salmon RJ, Thomas G (1997) Alternative genetic pathways in colorectal carcinogenesis. Proc Natl Acad Sci 94:12122-12127 10.1073/pnas.94.22.12122
29. Ohno S, Tachibana M, Fujii T, Ueda S, Kubota H, Nagasue N (2002) Role of stromal collagen in immunomodulation and prognosis of advanced gastric carcinoma. Int J Cancer 97:770-774 10.1002/ijc.10144
30. Arias AM (2001) Epithelial mesenchymal interactions in cancer and development. Cell 105:425-431 10.1016/S0092-8674(01)00365-8