Duplication of floral regulatory genes in the Lamiales

American Journal of Botany

Volumn 92, Issue 8, 2005, Pages 1284-1293

  Aagaard, Jan E ^a,b   Olmstead, Richard G ^b   Willis, John H ^c   Phillips, Patrick C ^a  

^a UNIVERSITY OF OREGON   (United States)

^b UNIVERSITY OF WASHINGTON   (United States)

^c DUKE UNIVERSITY   (United States)

Author keywords

Floral regulatory genes; Gene duplication; Lamiales

Indexed keywords

FLOWER; GENE;

ANTIRRHINUM; ANTIRRHINUM MAJUS; LAMIALES; MAGNOLIOPHYTA; PLANTAGINACEAE;

EID: 23044486769     PISSN: 00029122     EISSN: None     Source Type: Journal    
DOI: 10.3732/ajb.92.8.1284     Document Type: Article

References (60)

1. AMBROSE, B., D. LERNER, P. CICERI, C. PADILLA, M. YANOFSKY, AND R. SCHMIDT. 2000. Molecular and genetic analyses of the Silky1 gene reveals conservation in floral organ specification between eudicots and monocots. Molecular Cell 5: 569-579.
2. AOKI, S., K. UEHARA, M. IMAFUKU, M. HASEBE, AND M. ITO. 2004. Phylogeny and divergence of basal angiosperms inferred from APETALA3-and PISTILLATA-like MADS-box genes. Journal of Plant Research 117: 229-244.
3. BEARDSLEY, P., AND R. OLMSTEAD. 2002. Redefining Phrymaceae: the placement of Mimulus, tribe Mimuleae, and Phryma. American Journal of Botany 89: 1093-1102.
4. BLANC, G., AND K. WOLFE. 2004. Divergence of duplicated genes formed by polyploidy during Arabidopsis evolution. Plant Cell 16: 1679-1691.
5. BLAZQUEZ, M., AND D. WEIGEL. 2000. Integration of floral inductive signals in Arabidopsis. Nature 404: 889-892.
6. BOMBLIES, K., R. WANG, B. AMBROSE, R. SCHMIDT, R. MEELEY, AND J. DOEBLEY. 2003. Duplicate FLORICAULA/LEAFY homologs zfl1 and zfl2 control inflorescence architecture and flower patterning in maize. Development 130: 2385-2395.
7. BRADLEY, D., R. CARPENTER, H. SOMMER, N. HARTLEY, AND E. COEN. 1993. Complementary floral homeotic phenotypes result from opposite orientations of a transposon at the plena locus of Antirrhinum. Cell 72: 85-95.
8. BRADSHAW, H., S. WILBERT, K. OTTO, AND D. SCHEMSKE. 1995. Genetic mapping of floral traits associated with reproductive isolation in monkeyflowers (Mimulus). Nature 376: 762-765.
9. CARROLL, S., J. GRENIER, AND S. WEATHERBEE. 2001. From DNA to diversity. Blackwell Science, Maiden, Massachusetts, USA.
10. COEN, E., J. ROMERO, S. DOYLE, R. ELLIOTT, G. MURPHY, AND R. CARPENTER. 1990. floricaula: a homeotic gene required for flower development in Antirrhinum majus. Cell 63: 1311-1322.
11. CRONK, Q. 2001. Plant evolution and development in a post-genomic context. Nature Reviews Genetics 2: 607-619.
12. FISHMAN, L., A. KELLY, E. MORGAN, AND J. WILLIS. 2001. A genetic map in the Mimulus guttatus species complex reveals transmission ratio distortion due to heterospecific interactions. Genetics 159: 1701-1716.
13. FORCE, A., M. LYNCH, F. PICKETT, A. AMORES, Y. YAN, AND J. POSTLETHWAIT. 1999. Preservation of duplicate genes by complementary, degenerative mutations. Genetics 151: 1531-1545.
14. FROHLICH, M., AND D. PARKER. 2000. The mostly male theory of flower evolutionary origins: from genes to fossils. Systematic Botany 25: 155-170.
15. GAUT, B., AND J. DOEBLEY. 1997. DNA evidence for the segmental allote-traploid origin of maize. Proceedings of the National Academy of Sciences, USA 94: 6809-6814.
16. GOLDBLATT, P., AND B. KRUKOFF. 1984. Index to plant chromosome numbers 1979-1981. Monographs in Systematic Botany 4: 1-427.
17. GOLDMAN, N. 1993. Statistical tests of models of DNA substitution. Journal of Molecular Evolution 36: 182-198.
18. GOLDMAN, N., J. ANDERSON, AND A. RODRIGO. 2000. Likelihood-based tests of topologies in phylogenetics. Systematic Biology 49: 652-670.
19. GOTO, K., AND E. MEYEROWITZ. 1994. Function and regulation of the Arabidopsis floral homeotic gene Pistillata. Genes & Development 8: 1548-1560.
20. HILL, T., C. DAY, S. ZONDIO, A. THACKERAY, AND V. IRISH. 1998. Discrete spatial and temporal cis-acting elements regulate transcription of the Arabidopsis floral homeotic gene APETALA3. Development 125: 1711-1721.
21. HUGHES, A. 1999. Adaptive evolution of genes and genomes. Oxford University Press, Oxford, UK.
22. INGRAM, G., S. DOYLE, R. CARPENTER, E. SCHULTZ, R. SIMON, AND E. COEN. 1997. Dual role for fimbriata in regulating floral homeotic genes and cell division in Antirrhinum. European Molecular Biology Organization Journal 16: 6521-6534.
23. INGRAM, G., J. GOODRICH, M. WILKINSON, R. SIMON, G. HAUGHN, AND E. COEN. 1995. Parallels between UNUSUAL FLORAL ORGANS and FIMBRIATA, genes controlling flower development in Arabidopsis and Antirrhinum. Plant Cell 7: 1501-1510.
24. IRISH, V. 2003. The evolution of floral homeotic gene function. Bioessays 25: 637-646.
25. JACK, T., L. BROCKMAN, AND E. MEYEROWITZ. 1992. The homeotic gene APETALA3 of Arabidopsis thaliana encodes a MADS box and is expressed in petals and stamens. Cell 68: 683-697.
26. KELLY, A., M. BONNLANDER, AND D. MEEKS-WAGNER. 1995. NFL, the tobacco homolog of FLORICAULA and LEAFY, is transcriptionally expressed in both vegetative and floral meristems. Plant Cell 7: 225-234.
27. KELLY, A., AND J. WILLIS. 1998. Polymorphic microsatellite loci in Mimulus guttatus and related species. Molecular Ecology 7: 769-774.
28. KRAMER, E., V. DI STILIO, AND P. SCHLUTER. 2003. Complex patterns of gene duplication in the AP3 and PI lineages of the Ranunculaceae. International Journal of Plant Sciences 164: 1-11.
29. KRAMER, E., R. DORIT, AND V. IRISH. 1998. Molecular evolution of genes controlling petal and stamen development: duplication and divergence within the APETALA3 and PISTILLATA MADS-box gene lineages. Genetics 149: 765-783.
30. KRAMER, E., AND V. IRISH. 1999. Evolution of genetic mechanisms controlling petal development. Nature 399: 144-148.
31. KURODA, H., N. TAKAHASHI, H. SHIMADA, M. SEKI, K. SHINOZAKI, AND M. MATSUI. 2002. Classification and expression analysis of Arabidopsis F-box-containing protein genes. Plant Cell Physiology 43: 1073-1085.
32. KUSH, A., A. BRUNELLE, D. SHEVELL, AND N. CHUA. 1993. The cDNA sequence of two MADS box proteins in petunia. Plant Physiology 102: 1051-1052.
33. LAMB, R., T. HILL, Q. TAN, AND V. IRISH. 2002. Regulation of APETALA3 floral homeotic gene expression by meristem identity genes. Development 129: 2079-2086.
34. LOWMAN, A., AND M. PURUGGANAN. 1999. Duplication of the Brassica oleracea APETALA1 floral homeotic gene and the evolution of domesticated cauliflower. Journal of Heredity 90: 514-520.
35. LYNCH, M., AND J. CONERY. 2000. The evolutionary fate and consequences of duplicate genes. Science 290: 1151-1155.
36. MCSTEEN, P., C. VINCENT, S. DOYLE, R. CARPENTER, AND E. COEN. 1998. Control of floral homeotic gene expression and organ morphogenesis in Antirrhinum. Development 125: 2359-2369.
37. MENA, M., B. AMBROSE, R. MEELEY, S. BRIGGS, M. YANOFSKY, AND R. SCHMIDT. 1996. Diversification of C-function activity in maize flower development. Science 274: 1537-1540.
38. MOLINERO-ROSALES, N., M. JAMILENA, S. ZURITA, P. GOMEZ, J. CAPEL, AND R. LOZANO. 1999, FALSIFLORA, the tomato orthologue of FLORICAULA and LEAFY, controls flowering time and floral meristem identity. Plant Journal 20: 685-693.
39. OLMSTEAD, R., C. DEPAMPHILIS, A. WOLFE, N. YOUNG, W. ELISONS, AND P. REEVES. 2001. Disintegration of the Scrophulariaceae. American Journal of Botany 88: 348-361.
40. PARCY, F., O. NILSSON, M. BUSCH, I. LEE, AND D. WEIGEL. 1998. A genetic framework for floral patterning. Nature 395: 561-566.
41. PNUELI, L., M. ABU-ABEID, D. ZAMIR, W. NACKEN, Z. SCHWARZ-SOMMER, AND E. LIFSCHITZ. 1991. The MADS box gene family in tomato: temporal expression during floral development, conserved secondary structures and homology with homeotic genes from Antirrhinum and Arabidopsis. Plant Journal 1: 255-266.
42. POUTEAU, S., D. NICHOLLS, F. TOOKE, E. COEN, AND N. BATTEY. 1998. Transcription pattern of a FIM homologue in Impatiens during floral development and reversion. Plant Journal 14: 235-246.
43. RAFF, R. 1996. The shape of life. The University of Chicago Press, Chicago, Illinois, USA.
44. RAMBAUT, A., AND N. GRASSLEY. 1997. Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees. Computer Applications in the Biosciences 13: 235-238.
45. 2 hybrid population of Antirrhinum majus and A. molle. Genetics 163: 699-710.
46. SIMON, R., R. CARPENTER, S. DOYLE, AND E. COEN. 1994. Fimbriata controls flower development by mediating between meristem and organ-identity genes. Cell 78: 99-107.
47. SOMMER, H., J. BELTRAN, P. HUIJSER, H. PAPE, W. LONNIG, H. SAEDLER, AND Z. SCHWARZ-SOMMER. 1990. Deficiens, a homeotic gene involved in the control of flower morphogenesis in Antirrhinum majus: the protein shows homology to transcription factors. European Molecular Biology Organization Journal 9: 605-613.
48. SOUER, E., A. VAN DER KROL, D. KLOOS, C. SPELT, M. BLIEK, J. MOL, AND R. KOES. 1998. Genetic control of branching pattern and floral identity during Petunia inflorescence development. Development 125: 733-742.
49. STELLARI, G., M. JARAMILLO, AND E. KRAMER. 2004. Evolution of the APETALA3 and PISTILLATA lineages of MADS-box-containing genes in the basal angiosperms. Molecular Biology and Evolution 21: 506-519.
50. SUNDSTROM, J., A. CARLSBECKER, M. SVENSON, M. E. SVENSSON, AND P. ENGSTROM. 1999. MADS-box genes active in developing pollen cones of Norway spruce are homologous to the B-class floral homeotic genes in angiosperms. Developmental Genetics 25: 253-266.
51. SWOFFORD, D. 2002. PAUP*: phylogenetic analysis using parsimony (* and other methods), version 4.0 beta for Macintosh. Sinauer, Sunderland, Massachusetts, USA.
52. TAYLOR, S., J. HOFER, AND I. MURFET. 2001. Stamina pistilloida, the pea ortholog of FIM and UFO, is required for normal development of flowers, inflorescences, and leaves. Plant Cell 13: 31-46.
53. THEISSEN, G., A. BECKER, A. DI ROSA, A. KANNO, J. KIM, T. MUNSTER, K. WINTER, AND H. SAEDLER. 2000. A short history of MADS-box genes in plants. Plant Molecular Biology 42: 115-149.
54. TROBNER, W., L. RAMIREZ, P. MOTTE, I. HUE, P. HUIJSER, W. LONNIG, H. SAEDLER, H. SOMMER, AND Z. SCHWARZ-SOMMER. 1992. GLOBOSA: a homeotic gene which interacts with DEFICIENS in the control of Antirrhinum floral organogenesis. European Molecular Biology Organization Journal 11: 4693-4704.
55. WEIGEL, D., J. ALVAREZ, D. SMYTH, M. YANOFSKY, AND E. MEYEROWITZ. 1992. LEAFY controls floral meristem identity in Arabidopsis. Cell 69: 843-859.
56. WIKSTROM, N., V. SAVOLAINEN, AND M. CHASE. 2001. Evolution of the angiosperms: calibrating the family tree. Proceedings of the Royal Society of London, B, Biological Sciences 268: 2211-2220.
57. WILLIAM, D., Y. Su, M. SMITH, M. Lu, D. BALDWIN, AND D. WAGNER. 2004. Genomic identification of direct target genes of LEAFY. Proceedings of the National Academy of Sciences, USA 101: 1775-1780.
58. YANOFSKY, M., H. MA, J. BOWMAN, G. DREWS, K. FELDMAN, AND E. MEYEROWITZ. 1990. The protein encoded by the Arabidopsis homeotic gene agamous resembles transcription factors. Nature 346: 35-39.
59. ZHANG, S., N. SANDA, P. POLOWICK, J. STILLER, J. STOUGAARD, AND P. ROBERT. 2003. Proliferating floral organs (Pfo), a Lotus japonicus gene required for specifying floral meristem determinacy and organ identity, encodes an F-box protein. Plant Journal 33: 607-619.
60. ZHAO, D., Q. Yu, M. CHEN, AND H. MA. 2001. The ASK1 gene regulated B function gene expression in cooperation with UFO and LEAFY in Arabidopsis. Development 128: 2735-2746.