Global analysis of altered gene expression during morphogenesis of Candida albicans in vitro

Biochemical and Biophysical Research Communications

Volumn 334, Issue 4, 2005, Pages 1149-1158

  Singh, Vijender ^a   Sinha, Indranil ^a   Sadhale, Parag P ^a  

^a INDIAN INSTITUTE OF SCIENCE   (India)

Author keywords

Candida albicans; CPH1; Differential gene expression; EFG1; EGD1; Galactose metabolism; Macrophages; Microarray; Morphogenesis; Pseudohyphae

Indexed keywords

GALACTOSE; LIPID; PROTEIN; TRANSCRIPTION FACTOR;

ARTICLE; BINDING SITE; CANDIDA ALBICANS; CELL LINE; CONTROLLED STUDY; CULTURE MEDIUM; GENE EXPRESSION; INCUBATION TIME; LIPID METABOLISM; MACROPHAGE; MORPHOGENESIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN METABOLISM; STRESS;

BACTERIAL PROTEINS; CANDIDA ALBICANS; CELLS, CULTURED; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, BACTERIAL; GENE EXPRESSION REGULATION, DEVELOPMENTAL; HUMANS; MACROPHAGES; MORPHOGENESIS;

CANDIDA ALBICANS;

EID: 23044470360     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbrc.2005.07.018     Document Type: Article

References (45)

1. F.C. Odds Candida and Candidosis second ed. 1988 Bailliere Tindall Philadelphia, PA
2. J.D. McKinney, K. Honer zu Bentrup, E.J. Munoz-Elias, A. Miczak, B. Chen, W.T. Chan, D. Swenson, J.C. Sacchettini, W.R. Jacobs Jr., and D.G. Russell Persistence of Mycobacterium tuberculosis in macrophages and mice requires the glyoxylate shunt enzyme isocitrate lyase Nature 406 2000 735 738
3. T.H. Rude, D.L. Toffaletti, G.M. Cox, and J.R. Perfect Relationship of the glyoxylate pathway to the pathogenesis of Cryptococcus neoformans Infect. Immun. 70 2002 5684 5694
4. A. Idnurm, and B.J. Howlett Isocitrate lyase is essential for pathogenicity of the fungus Leptosphaeria maculans to canola (Brassica napus) Eukaryot. Cell 1 2002 719 724
5. A. Vazquez-Torres, and E. Balish Macrophages in resistance to candidiasis Microbiol. Mol. Biol. Rev. 61 1997 170 192
6. M.I. Borges-Walmsley, and A.R. Walmsley cAMP signalling in pathogenic fungi: control of dimorphic switching and pathogenicity Trends Microbiol. 8 2000 133 141
7. A.J. Brown, and N.A. Gow Regulatory networks controlling Candida albicans morphogenesis Trends Microbiol. 7 1999 333 338
8. J.F. Ernst Transcription factors in Candida albicans-environmental control of morphogenesis Microbiology 146 2000 1763 1774
9. M. Whiteway Transcriptional control of cell type and morphogenesis in Candida albicans Curr. Opin. Microbiol. 3 2000 582 588
10. E. Blasi, L. Pitzurra, M. Puliti, L. Lanfrancone, and F. Bistoni Early differential molecular response of a macrophage cell line to yeast and hyphal forms of Candida albicans Infect. Immun. 60 1992 832 837
11. M.D. Richardson, and H. Smith Ultrastructural features of phagocytosis and intracellular killing of Candida albicans by mouse polymorphonuclear hagocyte monolayers Mycopathologia 83 1983 97 102
12. L.P. Samaranayake, and T.W. MacFarlane The effect of dietary carbohydrates on the in vitro adhesion of Candida albicans to epithelial cells J. Med. Microbiol. 15 1982 511 517
13. J.L. Lopez-Ribot, Jose Pedro Martinez, Carlos Moneteagudo, Habib Mahmoud Allosh, Norah Victoria Mattioli, and Welda Lajean Chaffin Evidence for the presence of complex in Candida albicans cell wall glycoproteins Rev. Iberoam. Micol. 16 1999 23 26
14. A.M. Murad, C. d'Enfert, C. Gaillardin, H. Tournu, F. Tekaia, D. Talibi, D. Marechal, V. Marchais, J. Cottin, and A.J. Brown Transcript profiling in Candida albicans reveals new cellular functions for the transcriptional repressors CaTup1, CaMig1, and CaNrg1 Mol. Microbiol. 42 2001 981 993
15. A. Nantel, D. Dignard, C. Bachewich, D. Harcus, A. Marcil, A.P. Bouin, C.W. Sensen, H. Hogues, M. van het Hoog, P. Gordon, T. Rigby, F. Benoit, D.C. Tessier, D.Y. Thomas, and M. Whiteway Transcription profiling of Candida albicans cells undergoing the yeast-to-hyphal transition Mol. Biol. Cell 13 2002 3452 3465
16. B. Enjalbert, A. Nantel, and M. Whiteway Stress-induced gene expression in Candida albicans: absence of a general stress response Mol. Biol. Cell 14 2003 1460 1467
17. C. Fradin, M. Kretschmar, T. Nichterlein, C. Gaillardin, C. d'Enfert, and B. Hube Stage-specific gene expression of Candida albicans in human blood Mol. Microbiol. 47 2003 1523 1543
18. I. Rubin-Bejerano, I. Fraser, P. Grisafi, and G.R. Fink Phagocytosis by neutrophils induces an amino acid deprivation response in Saccharomyces cerevisiae and Candida albicans Proc. Natl. Acad. Sci. USA 16 100 2003 11007 11012
19. M.C. Lorenz, and G.R. Fink The glyoxylate cycle is required for fungal virulence Nature 412 2001 83 86
20. M.C. Lorenz, J.A. Bender, and G.R. Fink Transcriptional response of Candida albicans upon internalization by macrophages Eukaryot. Cell 3 2004 1076 1087
21. O. Prigneau, A. Porta, J.A. Poudrier, S. Colonna-Romano, T. Noel, and B. Maresca Genes involved in beta-oxidation, energy metabolism and glyoxylate cycle are induced by Candida albicans during macrophage infection Yeast 20 2003 723 730
22. W.A. Fonzi, and M.Y. Irwin Isogenic strain construction and gene mapping in Candida albicans Genetics 134 1993 717 728
23. F. Sherman Getting started with yeast Methods Enzymol. 194 1991 3 21
24. U. Vijayraghavan, M. Company, and J. Abelson Isolation and characterization of pre-mRNA splicing mutants of Saccharomyces cerevisiae Genes Dev. 3 1989 1206 1216
25. S. Garcia-Sanchez, S. Aubert, I. Iraqui, G. Janbon, J.M. Ghigo, and C. d'Enfert Candida albicans biofilms: a developmental state associated with specific and stable gene expression patterns Eukaryot. Cell 3 2004 536 545
26. D. Harcus, A. Nantel, A. Marcil, T. Rigby, and M. Whiteway Transcription profiling of cyclic AMP signaling in Candida albicans Mol. Biol. Cell 15 2004 4490 4499
27. E.S. Bensen, S.J. Martin, M. Li, J. Berman, and D.A. Davis Transcriptional profiling in Candida albicans reveals new adaptive responses to extracellular pH and functions for Rim101p Mol. Microbiol. 54 2004 1335 1351
28. C.Y. Lan, G. Newport, L.A. Murillo, T. Jones, S. Scherer, R.W. Davis, and N. Agabian Metabolic specialization associated with phenotypic switching in Candida albicans Proc. Natl. Acad. Sci. USA 99 2002 14907 14912
29. C.Y. Lan, G. Rodarte, L.A. Murillo, T. Jones, R.W. Davis, J. Dungan, G. Newport, and N. Agabian Regulatory networks affected by iron availability in Candida albicans Mol. Microbiol. 53 2004 1451 1469
30. M.B. Eisen, P.T. Spellman, P.O. Brown, and D. Botstein Cluster analysis and display of genome-wide expression patterns Proc. Natl. Acad. Sci. USA 95 1998 14863 14868
31. F.M. Ausubel, R. Brent, R. Kingston, D. Moore, J. Seidman, J.A. Smith, and K. Struhl Current Protocols in Molecular Biology 1987-1994 Wiley New York
32. M. Marone, S. Mozzetti, D.D. Ritis, L. Pierelli, and G. Scambia Semiquantitative RT-PCR analysis to assess the expression levels of multiple transcripts from the same sample Biol. Proc. Online 3 2001 19 25
33. B. Pillai, J. Verma, A. Abraham, P. Francis, Y. Kumar, U. Tatu, S.K. Brahmachari, and P.P. Sadhale Whole genome expression profiles of yeast RNA polymerase II core subunit, Rpb4, in stress and nonstress conditions J. Biol. Chem. 278 2003 3339 3346
34. M.R. Parthun, D.A. Mangus, and J.A. Jaehning The EGD1 product, a yeast homolog of human BTF3, may be involved in GAL4 DNA binding Mol. Cell. Biol. 12 1992 5683 5689
35. S. Lane, C. Birse, S. Zhou, R. Matson, and H. Liu DNA array studies demonstrate convergent regulation of virulence factors by Cph1, Cph2, and Efg1 in Candida albicans J. Biol. Chem. 276 2001 48988 48996
36. H.J. Lo, J.R. Kohler, B. DiDomenico, D. Loebenberg, A. Cacciapuoti, and G.R. Fink Nonfilamentous C. albicans mutants are avirulent Cell 90 1997 939 949
37. C. Kvaal, S.A. Lachke, T. Srikantha, K. Daniels, J. McCoy, and D.R. Soll Mis- expression of the opaque-phase-specific gene PEP1 (SAP1) in the white phase of Candida albicans confers increased virulence in a mouse model of cutaneous infection Infect. Immun. 67 1999 6652 6662
38. K. Sohn, C. Urban, H. Brunner, and S. Rupp EFG1 is a major regulator of cell wall dynamics in Candida albicans as revealed by DNA microarrays Mol. Microbiol. 47 2003 89 102
39. P.D. Rogers, and K.S. Barker Evaluation of differential gene expression in fluconazole-susceptible and -resistant isolates of Candida albicans by cDNA microarray analysis Antimicrob. Agents Chemother. 46 2002 3412 3417
40. D.P. Kontoyiannis, and G.S. May Identification of azole-responsive genes by microarray technology: why are we missing the efflux transporter genes Antimicrob. Agents Chemother. 45 2001 3674 3676
41. M.D. De Backer, T. Ilyina, X.J. Ma, S. Vandoninck, W.H. Luyten, and H. Vanden Bossche Genomic profiling of the response of Candida albicans to itraconazole treatment using a DNA microarray Antimicrob. Agents Chemother. 45 2001 1660 1670
42. A. Felk, M. Kretschmar, A. Albrecht, M. Schaller, S. Beinhauer, T. Nichterlein, D. Sanglard, H.C. Korting, W. Schafer, and B. Hube Candida albicans hyphal formation and the expression of the Efg1-regulated proteinases Sap4 to Sap6 are required for the invasion of parenchymal organs Infect. Immun. 70 2002 3689 3700
43. P. Staib, M. Kretschmar, T. Nichterlein, H. Hof, and J. Morschhauser Transcriptional regulators Cph1p and Efg1p mediate activation of the Candida albicans virulence gene SAP5 during infection Infect. Immun. 70 2002 921 927
44. J.-Y. Springael, E. Nikko, B. André, and A.-M. Marini Yeast Npi3/Bro1 is involved in ubiquitin-dependent control of permease trafficking FEBS Lett. 517 2002 103 109
45. X. Pan, T. Harashima, and J. Heitman Signal transduction cascades regulating pseudohyphal differentiation of Saccharomyces cerevisiae Curr. Opin. Microbiol. 3 2000 567 572