SCUD: Fast structure clustering of decoys using reference state to remove overall rotation

Journal of Computational Chemistry

Volumn 26, Issue 11, 2005, Pages 1189-1192

  Li, Hongzhi ^a   Zhou, Yaoqi ^a,b  

^a UNIVERSITY AT BUFFALO   (United States)

^b FUDAN UNIVERSITY   (China)

Author keywords

Decoy clustering; Near native detection; Root mean squared distance

Indexed keywords

DECOY CLUSTERING; NEAR-NATIVE DETECTION; PROTEIN DECOYS; ROOT-MEAN-SQUARE DISTANCE (RMSD);

BIOCHEMISTRY; COMPUTATIONAL METHODS; CONFORMATIONS; CORRELATION METHODS; DATA REDUCTION; FREE ENERGY;

PROTEINS;

PROTEIN;

ARTICLE; BIOLOGY; CHEMISTRY; CLUSTER ANALYSIS; METHODOLOGY;

CLUSTER ANALYSIS; COMPUTATIONAL BIOLOGY; PROTEINS;

EID: 22844446243     PISSN: 01928651     EISSN: None     Source Type: Journal    
DOI: 10.1002/jcc.20251     Document Type: Article

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