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Volumn 15, Issue 3, 2005, Pages 595-602

Validation of one-step real-time RT-PCR assay in combination with automated RNA extraction for rapid detection and quantitation of hepatitis C virus RNA for routine testing in clinical specimens

Author keywords

Automated RNA extraction; HCV RNA; Quantitation; Real time RT PCR

Indexed keywords

VIRUS RNA;

EID: 22544488382     PISSN: 10177825     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (5)

References (42)
  • 2
    • 0032420269 scopus 로고    scopus 로고
    • An improved PCR-based method for site directed mutagenesis using megaprimers
    • Brons-Poulsen, J., N. E. Petersen, M. Horder, and K. Kristiansen. 1998. An improved PCR-based method for site directed mutagenesis using megaprimers. Mol. Cell. Probes 12: 345-348.
    • (1998) Mol. Cell. Probes , vol.12 , pp. 345-348
    • Brons-Poulsen, J.1    Petersen, N.E.2    Horder, M.3    Kristiansen, K.4
  • 3
    • 0033501990 scopus 로고    scopus 로고
    • Assessment of needs for plasma for fractionation in Europe
    • Burckhardt, J. J. 1999. Assessment of needs for plasma for fractionation in Europe. Biologicals 27: 337-341.
    • (1999) Biologicals , vol.27 , pp. 337-341
    • Burckhardt, J.J.1
  • 4
    • 0024509701 scopus 로고
    • Isolation of a cDNA clone derived from a blood-borne non-A, non-B viral hepatitis genome
    • Choo, Q. L., G. Kuo, A. J. Weiner, L. R. Overby, D. W. Bradley, and M. Houghton. 1989. Isolation of a cDNA clone derived from a blood-borne non-A, non-B viral hepatitis genome. Science 244: 359-362.
    • (1989) Science , vol.244 , pp. 359-362
    • Choo, Q.L.1    Kuo, G.2    Weiner, A.J.3    Overby, L.R.4    Bradley, D.W.5    Houghton, M.6
  • 5
    • 85031645659 scopus 로고    scopus 로고
    • Note for guidance on plasma derived medicinal products: The introduction of genomic amplification technology for plasma pool testing
    • Committee for Proprietary Medicinal Products. CPMP/BWP/390/97
    • Committee for Proprietary Medicinal Products. 1998. Note for guidance on plasma derived medicinal products: The introduction of genomic amplification technology for plasma pool testing. European Agency for the Evaluation of Medicinal Products CPMP/BWP/390 /97.
    • (1998) European Agency for the Evaluation of Medicinal Products
  • 6
    • 0036589027 scopus 로고    scopus 로고
    • Automated screening of blood donations for hepatitis C virus RNA using the Qiagen BioRobot 9604 and the Roche COBAS HCV Amplicor assay
    • Grant, P. R., C. M. Sims, F. Krieg-Schneider, E. M. Love, R. Eglin, and R. S. Tedder. 2002. Automated screening of blood donations for hepatitis C virus RNA using the Qiagen BioRobot 9604 and the Roche COBAS HCV Amplicor assay. Vox Sang. 82: 169-176.
    • (2002) Vox Sang. , vol.82 , pp. 169-176
    • Grant, P.R.1    Sims, C.M.2    Krieg-Schneider, F.3    Love, E.M.4    Eglin, R.5    Tedder, R.S.6
  • 7
    • 7344226711 scopus 로고    scopus 로고
    • Expression and characterization of recombinant E2 protein of hepatitis C virus by insect cell/baculovirus expression system
    • Han, B. K., B. Y. Lee, M. K. Min, and K. H. Jung. 1998. Expression and characterization of recombinant E2 protein of hepatitis C virus by insect cell/baculovirus expression system. J. Microbiol. Biotechnol. 8: 361-368.
    • (1998) J. Microbiol. Biotechnol. , vol.8 , pp. 361-368
    • Han, B.K.1    Lee, B.Y.2    Min, M.K.3    Jung, K.H.4
  • 9
    • 12444255110 scopus 로고    scopus 로고
    • Development of real-time RT-PCR for evaluation of JEV clearance during purification of HPV type 16 L1 virus-like particles
    • Jeong, H. S., J. H. Shin, Y. N. Park, J. Y. Choi, Y. L. Kim, B. G. Kim, S. R. Ryu, S. Y. Baek, S. H. Lee, and S. N. Park. 2003. Development of real-time RT-PCR for evaluation of JEV clearance during purification of HPV type 16 L1 virus-like particles. Biologicals 31: 223-229.
    • (2003) Biologicals , vol.31 , pp. 223-229
    • Jeong, H.S.1    Shin, J.H.2    Park, Y.N.3    Choi, J.Y.4    Kim, Y.L.5    Kim, B.G.6    Ryu, S.R.7    Baek, S.Y.8    Lee, S.H.9    Park, S.N.10
  • 10
    • 0035010125 scopus 로고    scopus 로고
    • Development and evaluation of a real-time quantitative PCR for the detection of human cytomegalovirus
    • Kearns, A. M., M. Guiver, V. James, and J. King. 2001. Development and evaluation of a real-time quantitative PCR for the detection of human cytomegalovirus. J. Virol. Methods 95: 121-131.
    • (2001) J. Virol. Methods , vol.95 , pp. 121-131
    • Kearns, A.M.1    Guiver, M.2    James, V.3    King, J.4
  • 12
    • 0036548201 scopus 로고    scopus 로고
    • Risk factors for hepatitis C virus infection among Koreans according to the hepatitis C virus genotype
    • Kim, Y. S., Y. O. Alin, and H. S. Lee. 2002. Risk factors for hepatitis C virus infection among Koreans according to the hepatitis C virus genotype. J. Korean Med. Sci. 17: 187-192.
    • (2002) J. Korean Med. Sci. , vol.17 , pp. 187-192
    • Kim, Y.S.1    Alin, Y.O.2    Lee, H.S.3
  • 13
    • 0042510144 scopus 로고    scopus 로고
    • Comparison of automated and manual nucleic acid extraction methods for detection of enterovirus RNA
    • Knepp, J. H., M. A. Geahr, M. S. Forman, and A. Valsamakis. 2003. Comparison of automated and manual nucleic acid extraction methods for detection of enterovirus RNA. J. Clin. Microbiol. 41: 3532-2536.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 2536-3532
    • Knepp, J.H.1    Geahr, M.A.2    Forman, M.S.3    Valsamakis, A.4
  • 14
    • 0036826651 scopus 로고    scopus 로고
    • Quantitative analysis of Leuconostoc mesenteroides and Lactobacillus plantarum populations by a competitive polymerase chain reaction
    • Koh, Y. H., M. D. Kim, N. S. Han, and J. H. Seo. 2002. Quantitative analysis of Leuconostoc mesenteroides and Lactobacillus plantarum populations by a competitive polymerase chain reaction. J. Microbiol. Biotechnol. 12: 801-806.
    • (2002) J. Microbiol. Biotechnol. , vol.12 , pp. 801-806
    • Koh, Y.H.1    Kim, M.D.2    Han, N.S.3    Seo, J.H.4
  • 17
    • 0030004766 scopus 로고    scopus 로고
    • Use of UV methods for measurement of protein and nucleic acid concentrations
    • Manchester, K. L. 1996. Use of UV methods for measurement of protein and nucleic acid concentrations. Biotechniques 20: 968-970.
    • (1996) Biotechniques , vol.20 , pp. 968-970
    • Manchester, K.L.1
  • 21
    • 18544407116 scopus 로고    scopus 로고
    • New quantitative assay of hepatitis B and C viruses by competitive PCR using alternative internal sequences
    • Payan, C., N. Veal, B. Crescenzo-Chaigne, L. Belec, and J. Pillot. 1997. New quantitative assay of hepatitis B and C viruses by competitive PCR using alternative internal sequences. J. Virol. Methods 65: 299-305.
    • (1997) J. Virol. Methods , vol.65 , pp. 299-305
    • Payan, C.N.1    Veal, B.2    Crescenzo-Chaigne, L.3    Belec, L.4    Pillot, J.5
  • 22
    • 0036711424 scopus 로고    scopus 로고
    • Sensitivity and reproducibility of HCV quantitation in chimpanzee sera using TaqMan real-time PCR assay
    • Puig, M., K. Mihalik, M. Y. Yu, S. M. Feinstone, and M. E. Major. 2002. Sensitivity and reproducibility of HCV quantitation in chimpanzee sera using TaqMan real-time PCR assay. J. Virol. Methods 105: 253-263.
    • (2002) J. Virol. Methods , vol.105 , pp. 253-263
    • Puig, M.1    Mihalik, K.2    Yu, M.Y.3    Feinstone, S.M.4    Major, M.E.5
  • 24
    • 0036170804 scopus 로고    scopus 로고
    • Two-round rapid-cycle RT-PCR in single closed capillaries increases the sensitivity of HCV RNA detection and avoids amplicon carry-over
    • Ratge, D., B. Scheiblhuber, O. Landt, J. Berg, and C. Knabbe. 2002. Two-round rapid-cycle RT-PCR in single closed capillaries increases the sensitivity of HCV RNA detection and avoids amplicon carry-over. J. Clin. Virol. 24: 161-172.
    • (2002) J. Clin. Virol. , vol.24 , pp. 161-172
    • Ratge, D.1    Scheiblhuber, B.2    Landt, O.3    Berg, J.4    Knabbe, C.5
  • 25
    • 0033638049 scopus 로고    scopus 로고
    • High-speed detection of blood-borne hepatitis C virus RNA by single-tube real-time fluorescence reverse transcription-PCR with the LightCycler
    • Ratge, D., B. Scheiblhuber, M. Nitsche, and C. Knabbe. 2000. High-speed detection of blood-borne hepatitis C virus RNA by single-tube real-time fluorescence reverse transcription-PCR with the LightCycler. Clin. Chem. 46: 1987-1989.
    • (2000) Clin. Chem. , vol.46 , pp. 1987-1989
    • Ratge, D.1    Scheiblhuber, B.2    Nitsche, M.3    Knabbe, C.4
  • 26
    • 0031004758 scopus 로고    scopus 로고
    • Comparison of competitive and non-competitive reverse transcription-polymerase chain reaction (RT-PCR) for the quantification of hepatitis C virus (HCV) RNA
    • Ravaggi, A., M. R. Biasin, D. Infantolino, and E. Cariani. 1997. Comparison of competitive and non-competitive reverse transcription-polymerase chain reaction (RT-PCR) for the quantification of hepatitis C virus (HCV) RNA. J. Virol. Methods 65: 123-129.
    • (1997) J. Virol. Methods , vol.65 , pp. 123-129
    • Ravaggi, A.1    Biasin, M.R.2    Infantolino, D.3    Cariani, E.4
  • 27
    • 0037291996 scopus 로고    scopus 로고
    • Evaluation of automated RT-PCR to accelerate the laboratory diagnosis of foot-and-mouth disease virus
    • Reid, S. M., S. S. Grierson, N. P. Ferris, G. H. Hutchings, and S. Alexandersen. 2003. Evaluation of automated RT-PCR to accelerate the laboratory diagnosis of foot-and-mouth disease virus. J. Virol. Methods 107: 129-139.
    • (2003) J. Virol. Methods , vol.107 , pp. 129-139
    • Reid, S.M.1    Grierson, S.S.2    Ferris, N.P.3    Hutching, G.H.4    Alexandersen, S.5
  • 28
    • 0030841812 scopus 로고    scopus 로고
    • Outbreak of hepatitis C virus infection in patients with hematologic disorders treated with intravenous immunoglobulins: Different prognosis according to the immune status
    • Rossi, G., A. Tucci, E. Cariani, A. Ravaggi, A. Rossini, and E. Radaeli. 1997. Outbreak of hepatitis C virus infection in patients with hematologic disorders treated with intravenous immunoglobulins: Different prognosis according to the immune status. Blood 90: 1309-1314.
    • (1997) Blood , vol.90 , pp. 1309-1314
    • Rossi, G.1    Tucci, A.2    Cariani, E.3    Ravaggi, A.4    Rossini, A.5    Radaeli, E.6
  • 29
    • 0033971683 scopus 로고    scopus 로고
    • Evaluation of the COBAS AMPLICOR CMV MONITOR test for detection of viral DNA in specimens taken from patients after liver transplantation
    • Sia, I. G., J. A. Wilson, M. J. Espy, C. V. Paya, and T. F. Smith. 2000. Evaluation of the COBAS AMPLICOR CMV MONITOR test for detection of viral DNA in specimens taken from patients after liver transplantation. J. Clin. Microbiol. 38: 600-606.
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 600-606
    • Sia, I.G.1    Wilson, J.A.2    Espy, M.J.3    Paya, C.V.4    Smith, T.F.5
  • 35
    • 0036177382 scopus 로고    scopus 로고
    • Rapid diagnosis of enterovirus infections by real-time PCR on the LightCycler using the TaqMan format
    • Watkins-Riedel, T., M. Woegerbauer, D. Hollemann, and P. Hufnagl. 2002. Rapid diagnosis of enterovirus infections by real-time PCR on the LightCycler using the TaqMan format. Diagn. Microbiol. Infect. Dis. 42: 99-105.
    • (2002) Diagn. Microbiol. Infect. Dis. , vol.42 , pp. 99-105
    • Watkins-Riedel, T.1    Woegerbauer, M.2    Hollemann, D.3    Hufnagl, P.4
  • 36
    • 0033965142 scopus 로고    scopus 로고
    • Comparison of PCR, antigenemia assay, and rapid blood culture for detection and prevention of cytomegalovirus disease after lung transplantation
    • Weinberg, A., T. N. Hodges, S. Li, G. Cai, and M. R. Zamora. 2000. Comparison of PCR, antigenemia assay, and rapid blood culture for detection and prevention of cytomegalovirus disease after lung transplantation. J. Clin. Microbiol. 38: 768-772.
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 768-772
    • Weinberg, A.1    Hodges, T.N.2    Li, S.3    Cai, G.4    Zamora, M.R.5
  • 38
    • 0030938935 scopus 로고    scopus 로고
    • At least three hepatitis C virus strains implicated in Swedish and Danish patients with intravenous immunoglobulin-associated hepatitis C
    • Widell, A., Y. Y. Zhang, B. Andersson-Gare, and L. Hammarstrom. 1997. At least three hepatitis C virus strains implicated in Swedish and Danish patients with intravenous immunoglobulin-associated hepatitis C. Transfusion 37: 313-320.
    • (1997) Transfusion , vol.37 , pp. 313-320
    • Widell, A.1    Zhang, Y.Y.2    Andersson-Gare, B.3    Hammarstrom, L.4
  • 39
    • 0034235962 scopus 로고    scopus 로고
    • Low frequency of cirrhosis in a hepatitis C (genotype 1b) single-source outbreak in Germany: A 20-year multicenter study
    • Wiese, M., F. Berr, M. Lafrenz, H. Porst, and U. Oesen. 2000. Low frequency of cirrhosis in a hepatitis C (genotype 1b) single-source outbreak in Germany: A 20-year multicenter study. Hepatology 32: 91-96.
    • (2000) Hepatology , vol.32 , pp. 91-96
    • Wiese, M.1    Berr, F.2    Lafrenz, M.3    Porst, H.4    Oesen, U.5
  • 41
    • 0036130364 scopus 로고    scopus 로고
    • A reverse-transcription competitive PCR assay based on chemiluminescence hybridization for detection and quantification of hepatitis C virus RNA
    • Young, K. C., T. T. Chang, W. C. Hsiao, P. N. Cheng, S. H. Chen, and C. M. Jen. 2002. A reverse-transcription competitive PCR assay based on chemiluminescence hybridization for detection and quantification of hepatitis C virus RNA. J. Virol. Methods 103: 27-39.
    • (2002) J. Virol. Methods , vol.103 , pp. 27-39
    • Young, K.C.1    Chang, T.T.2    Hsiao, W.C.3    Cheng, P.N.4    Chen, S.H.5    Jen, C.M.6
  • 42
    • 0028887860 scopus 로고
    • Detection of hepatitis C virus RNA by a combined reverse transcription PCR assay: Comparison with nested amplification and antibody testing
    • Young, K. K., J. J. Archer, O. Yokosuka, M. Omata, and R. M. Resnick. 1995. Detection of hepatitis C virus RNA by a combined reverse transcription PCR assay: Comparison with nested amplification and antibody testing. J. Clin. Microbiol. 33: 654-657.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 654-657
    • Young, K.K.1    Archer, J.J.2    Yokosuka, O.3    Omata, M.4    Resnick, R.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.