-
1
-
-
0002495140
-
Biosynthesis and function of modified nucleosides
-
D. Söll U. RajBhandary American Society for Microbiology Washington, DC
-
G. Björk Biosynthesis and function of modified nucleosides D. Söll U. RajBhandary tRNA: Structure, Biosynthesis, and Function 1995 American Society for Microbiology Washington, DC 165 205
-
(1995)
TRNA: Structure, Biosynthesis, and Function
, pp. 165-205
-
-
Björk, G.1
-
2
-
-
0028559230
-
A P-loop-like motif in a widespread ATP pyrophosphatase domain: Implications for the evolution of sequence motifs and enzyme activity
-
P. Bork, and E.V. Koonin A P-loop-like motif in a widespread ATP pyrophosphatase domain: implications for the evolution of sequence motifs and enzyme activity Proteins 20 1994 347 355
-
(1994)
Proteins
, vol.20
, pp. 347-355
-
-
Bork, P.1
Koonin, E.V.2
-
3
-
-
0002090634
-
Modified nucleosides in translation
-
H. Grosjean R. Benne ASM Press Washington, DC
-
J.F. Curran Modified nucleosides in translation H. Grosjean R. Benne Modification and Editing of RNA 1998 ASM Press Washington, DC 463 516
-
(1998)
Modification and Editing of RNA
, pp. 463-516
-
-
Curran, J.F.1
-
4
-
-
1842743703
-
Asp
-
Asp Proc. Natl. Acad. Sci. USA 101 2004 7530 7535
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 7530-7535
-
-
Dubois, D.Y.1
Blaise, M.2
Becker, H.D.3
Campanacci, V.4
Keith, G.5
Giege, R.6
Cambillau, C.7
Lapointe, J.8
Kern, D.9
-
6
-
-
3643114575
-
Universal rules and idiosyncratic features in tRNA identity
-
R. Giege, M. Sissler, and C. Florentz Universal rules and idiosyncratic features in tRNA identity Nucleic Acids Res. 26 1998 5017 5035
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 5017-5035
-
-
Giege, R.1
Sissler, M.2
Florentz, C.3
-
7
-
-
0015970544
-
Purification and characterization of AUA specific isoleucine transfer ribonucleic acid from Escherichia coli B
-
F. Harada, and S. Nishimura Purification and characterization of AUA specific isoleucine transfer ribonucleic acid from Escherichia coli B Biochemistry 13 1974 300 307
-
(1974)
Biochemistry
, vol.13
, pp. 300-307
-
-
Harada, F.1
Nishimura, S.2
-
8
-
-
0029872940
-
Construction of mini-F plasmid vectors for plasmid shuffling in Escherichia coli
-
J. Kato, and H. Ikeda Construction of mini-F plasmid vectors for plasmid shuffling in Escherichia coli Gene 170 1996 141 142
-
(1996)
Gene
, vol.170
, pp. 141-142
-
-
Kato, J.1
Ikeda, H.2
-
9
-
-
0035653365
-
The 1.6 Å crystal structure of E. coli argininosuccinate synthetase suggests a conformational change during catalysis
-
C.T. Lemke, and P.L. Howell The 1.6 Å crystal structure of E. coli argininosuccinate synthetase suggests a conformational change during catalysis Structure (Camb.) 9 2001 1153 1164
-
(2001)
Structure (Camb.)
, vol.9
, pp. 1153-1164
-
-
Lemke, C.T.1
Howell, P.L.2
-
10
-
-
0037066707
-
Substrate induced conformational changes in argininosuccinate synthetase
-
C.T. Lemke, and P.L. Howell Substrate induced conformational changes in argininosuccinate synthetase J. Biol. Chem. 277 2002 13074 13081
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 13074-13081
-
-
Lemke, C.T.1
Howell, P.L.2
-
11
-
-
0036792830
-
TRNomics: Analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features
-
C. Marck, and H. Grosjean tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features RNA 8 2002 1189 1232
-
(2002)
RNA
, vol.8
, pp. 1189-1232
-
-
Marck, C.1
Grosjean, H.2
-
12
-
-
0029926969
-
Characterization of a B. subtilis minor isoleucine tRNA deduced from tDNA having a methionine anticodon CAT
-
J. Matsugi, K. Murao, and H. Ishikura Characterization of a B. subtilis minor isoleucine tRNA deduced from tDNA having a methionine anticodon CAT J. Biochem. (Tokyo) 119 1996 811 816
-
(1996)
J. Biochem. (Tokyo)
, vol.119
, pp. 811-816
-
-
Matsugi, J.1
Murao, K.2
Ishikura, H.3
-
13
-
-
0027498441
-
Critical role of the acceptor stem of tRNAs(Met) in their aminoacylation by Escherichia coli methionyl-tRNA synthetase
-
T. Meinnel, Y. Mechulam, C. Lazennec, S. Blanquet, and G. Fayat Critical role of the acceptor stem of tRNAs(Met) in their aminoacylation by Escherichia coli methionyl-tRNA synthetase J. Mol. Biol. 229 1993 26 36
-
(1993)
J. Mol. Biol.
, vol.229
, pp. 26-36
-
-
Meinnel, T.1
Mechulam, Y.2
Lazennec, C.3
Blanquet, S.4
Fayat, G.5
-
15
-
-
0032696906
-
Using genomic information to investigate the function of ThiI, an enzyme shared between thiamin and 4-thiouridine biosynthesis
-
E.G. Mueller, and P.M. Palenchar Using genomic information to investigate the function of ThiI, an enzyme shared between thiamin and 4-thiouridine biosynthesis Protein Sci. 8 1999 2424 2427
-
(1999)
Protein Sci.
, vol.8
, pp. 2424-2427
-
-
Mueller, E.G.1
Palenchar, P.M.2
-
16
-
-
0023734317
-
Codon and amino-acid specificities of a transfer RNA are both converted by a single post-transcriptional modification
-
T. Muramatsu, K. Nishikawa, F. Nemoto, Y. Kuchino, S. Nishimura, T. Miyazawa, and S. Yokoyama Codon and amino-acid specificities of a transfer RNA are both converted by a single post-transcriptional modification Nature 336 1988 179 181
-
(1988)
Nature
, vol.336
, pp. 179-181
-
-
Muramatsu, T.1
Nishikawa, K.2
Nemoto, F.3
Kuchino, Y.4
Nishimura, S.5
Miyazawa, T.6
Yokoyama, S.7
-
17
-
-
0023942379
-
A novel lysine-substituted nucleoside in the first position of the anticodon of minor isoleucine tRNA from Escherichia coli
-
T. Muramatsu, S. Yokoyama, N. Horie, A. Matsuda, T. Ueda, Z. Yamaizumi, Y. Kuchino, S. Nishimura, and T. Miyazawa A novel lysine-substituted nucleoside in the first position of the anticodon of minor isoleucine tRNA from Escherichia coli J. Biol. Chem. 263 1988 9261 9267
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 9261-9267
-
-
Muramatsu, T.1
Yokoyama, S.2
Horie, N.3
Matsuda, A.4
Ueda, T.5
Yamaizumi, Z.6
Kuchino, Y.7
Nishimura, S.8
Miyazawa, T.9
-
18
-
-
0027536912
-
Aminoacylation of RNA oligonucleotides: Minimalist structures and origin of specificity
-
K. Musier-Forsyth, and P. Schimmel Aminoacylation of RNA oligonucleotides: minimalist structures and origin of specificity FASEB J. 7 1993 282 289
-
(1993)
FASEB J.
, vol.7
, pp. 282-289
-
-
Musier-Forsyth, K.1
Schimmel, P.2
-
19
-
-
0033730646
-
Alternative designs for construction of the class II transfer RNA tertiary core
-
T.A. Nissan, and J.J. Perona Alternative designs for construction of the class II transfer RNA tertiary core RNA 6 2000 1585 1596
-
(2000)
RNA
, vol.6
, pp. 1585-1596
-
-
Nissan, T.A.1
Perona, J.J.2
-
20
-
-
0028266202
-
Molecular recognition of the identity-determinant set of isoleucine transfer RNA from Escherichia coli
-
O. Nureki, T. Niimi, T. Muramatsu, H. Kanno, T. Kohno, C. Florentz, R. Giege, and S. Yokoyama Molecular recognition of the identity-determinant set of isoleucine transfer RNA from Escherichia coli J. Mol. Biol. 236 1994 710 724
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 710-724
-
-
Nureki, O.1
Niimi, T.2
Muramatsu, T.3
Kanno, H.4
Kohno, T.5
Florentz, C.6
Giege, R.7
Yokoyama, S.8
-
21
-
-
0029789527
-
Crystal structure of NH3-dependent NAD+ synthetase from Bacillus subtilis
-
M. Rizzi, C. Nessi, A. Mattevi, A. Coda, M. Bolognesi, and A. Galizzi Crystal structure of NH3-dependent NAD+ synthetase from Bacillus subtilis EMBO J. 15 1996 5125 5134
-
(1996)
EMBO J.
, vol.15
, pp. 5125-5134
-
-
Rizzi, M.1
Nessi, C.2
Mattevi, A.3
Coda, A.4
Bolognesi, M.5
Galizzi, A.6
-
22
-
-
1842642896
-
A truncated aminoacyl-tRNA synthetase modifies RNA
-
J.C. Salazar, A. Ambrogelly, P.F. Crain, J.A. McCloskey, and D. Söll A truncated aminoacyl-tRNA synthetase modifies RNA Proc. Natl. Acad. Sci. USA 101 2004 7536 7541
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 7536-7541
-
-
Salazar, J.C.1
Ambrogelly, A.2
Crain, P.F.3
McCloskey, J.A.4
Söll, D.5
-
23
-
-
0023953676
-
Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro
-
J.R. Sampson, and O.C. Uhlenbeck Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro Proc. Natl. Acad. Sci. USA 85 1988 1033 1037
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 1033-1037
-
-
Sampson, J.R.1
Uhlenbeck, O.C.2
-
24
-
-
0032169588
-
Diverse RNA substrates for aminoacylation: Clues to origins?
-
P. Schimmel, and R. Alexander Diverse RNA substrates for aminoacylation: clues to origins? Proc. Natl. Acad. Sci. USA 95 1998 10351 10353
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 10351-10353
-
-
Schimmel, P.1
Alexander, R.2
-
25
-
-
0025101685
-
An anticodon change switches the identity of E. coli tRNA(mMet) from methionine to threonine
-
L.H. Schulman, and H. Pelka An anticodon change switches the identity of E. coli tRNA(mMet) from methionine to threonine Nucleic Acids Res. 18 1990 285 289
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 285-289
-
-
Schulman, L.H.1
Pelka, H.2
-
26
-
-
0035861685
-
Dual mode recognition of two isoacceptor tRNAs by mammalian mitochondrial seryl-tRNA synthetase
-
N. Shimada, T. Suzuki, and K. Watanabe Dual mode recognition of two isoacceptor tRNAs by mammalian mitochondrial seryl-tRNA synthetase J. Biol. Chem. 276 2001 46770 46778
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 46770-46778
-
-
Shimada, N.1
Suzuki, T.2
Watanabe, K.3
-
27
-
-
13444288185
-
Compilation of tRNA sequences and sequences of tRNA genes
-
M. Sprinzl, and K.S. Vassilenko Compilation of tRNA sequences and sequences of tRNA genes Nucleic Acids Res. 33 Database issue 2005 D139 D140
-
(2005)
Nucleic Acids Res.
, vol.33
, Issue.DATABASE ISSUE
-
-
Sprinzl, M.1
Vassilenko, K.S.2
-
28
-
-
10744229752
-
An RNA-modifying enzyme that governs both the codon and amino acid specificities of isoleucine tRNA
-
A. Soma, Y. Ikeuchi, S. Kanemasa, K. Kobayashi, N. Ogasawara, T. Ote, J. Kato, K. Watanabe, Y. Sekine, and T. Suzuki An RNA-modifying enzyme that governs both the codon and amino acid specificities of isoleucine tRNA Mol. Cell 12 2003 689 698
-
(2003)
Mol. Cell
, vol.12
, pp. 689-698
-
-
Soma, A.1
Ikeuchi, Y.2
Kanemasa, S.3
Kobayashi, K.4
Ogasawara, N.5
Ote, T.6
Kato, J.7
Watanabe, K.8
Sekine, Y.9
Suzuki, T.10
-
30
-
-
0742306912
-
Functional compatibility of elongation factors between mammalian mitochondrial and bacterial ribosomes: Characterization of GTPase activity and translation elongation by hybrid ribosomes bearing heterologous L7/12 proteins
-
M. Terasaki, T. Suzuki, T. Hanada, and K. Watanabe Functional compatibility of elongation factors between mammalian mitochondrial and bacterial ribosomes: characterization of GTPase activity and translation elongation by hybrid ribosomes bearing heterologous L7/12 proteins J. Mol. Biol. 336 2004 331 342
-
(2004)
J. Mol. Biol.
, vol.336
, pp. 331-342
-
-
Terasaki, M.1
Suzuki, T.2
Hanada, T.3
Watanabe, K.4
-
31
-
-
0030024963
-
The crystal structure of GMP synthetase reveals a novel catalytic triad and is a structural paradigm for two enzyme families
-
J.J. Tesmer, T.J. Klem, M.L. Deras, V.J. Davisson, and J.L. Smith The crystal structure of GMP synthetase reveals a novel catalytic triad and is a structural paradigm for two enzyme families Nat. Struct. Biol. 3 1996 74 86
-
(1996)
Nat. Struct. Biol.
, vol.3
, pp. 74-86
-
-
Tesmer, J.J.1
Klem, T.J.2
Deras, M.L.3
Davisson, V.J.4
Smith, J.L.5
-
32
-
-
0033835792
-
The role of tightly bound ATP in Escherichia coli tRNA nucleotidyltransferase
-
Y. Tomari, T. Suzuki, K. Watanabe, and T. Ueda The role of tightly bound ATP in Escherichia coli tRNA nucleotidyltransferase Genes Cells 5 2000 689 698
-
(2000)
Genes Cells
, vol.5
, pp. 689-698
-
-
Tomari, Y.1
Suzuki, T.2
Watanabe, K.3
Ueda, T.4
-
33
-
-
0037544102
-
Kinetic mechanism of the tRNA-modifying enzyme S-adenosylmethionine:tRNA ribosyltransferase-isomerase (QueA)
-
S.G. Van Lanen, and D. Iwata-Reuyl Kinetic mechanism of the tRNA-modifying enzyme S-adenosylmethionine:tRNA ribosyltransferase-isomerase (QueA) Biochemistry 42 2003 5312 5320
-
(2003)
Biochemistry
, vol.42
, pp. 5312-5320
-
-
Van Lanen, S.G.1
Iwata-Reuyl, D.2
-
34
-
-
0025182710
-
A potato mitochondrial isoleucine tRNA is coded for by a mitochondrial gene possessing a methionine anticodon
-
F. Weber, A. Dietrich, J.H. Weil, and L. Marechal-Drouard A potato mitochondrial isoleucine tRNA is coded for by a mitochondrial gene possessing a methionine anticodon Nucleic Acids Res. 18 1990 5027 5030
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 5027-5030
-
-
Weber, F.1
Dietrich, A.2
Weil, J.H.3
Marechal-Drouard, L.4
-
35
-
-
0037099742
-
TadA, an essential tRNA-specific adenosine deaminase from Escherichia coli
-
J. Wolf, A.P. Gerber, and W. Keller tadA, an essential tRNA-specific adenosine deaminase from Escherichia coli EMBO J. 21 2002 3841 3851
-
(2002)
EMBO J.
, vol.21
, pp. 3841-3851
-
-
Wolf, J.1
Gerber, A.P.2
Keller, W.3
-
36
-
-
0002365884
-
Modified nucleosides and codon recognition
-
D. Söll U. RajBhandary American Society for Microbiology Washington, DC
-
S. Yokoyama, and S. Nishimura Modified nucleosides and codon recognition D. Söll U. RajBhandary tRNA: Structure, Biosynthesis, and Function 1995 American Society for Microbiology Washington, DC 207 224
-
(1995)
TRNA: Structure, Biosynthesis, and Function
, pp. 207-224
-
-
Yokoyama, S.1
Nishimura, S.2
|