Tetragenococcus koreensis sp. nov., a novel rhamnolipid-producing bacterium

International Journal of Systematic and Evolutionary Microbiology

Volumn 55, Issue 4, 2005, Pages 1409-1413

  Lee, Myungjin ^a,b   Kim, Myung Kyum ^b   Vancanneyt, Marc ^c   Swings, Jean ^c   Kim, Seong Hye ^b   Kang, Myung Suk ^b   Lee, Sung Taik ^b  

^a NeoPharm Co Ltd   (South Korea)

^b Korea Advanced Institute of Science and Technology (KAIST)   (South Korea)

^c GHENT UNIVERSITY   (Belgium)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; CYTOSINE; FATTY ACID; GUANINE; LIPID; RNA 16S;

ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIUM; BACTERIUM ISOLATION; CONTROLLED STUDY; DNA CONTENT; FOOD; GRAM POSITIVE BACTERIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENY; PRIORITY JOURNAL; RNA SEQUENCE; SEQUENCE HOMOLOGY; TAXONOMY; TETRAGENOCOCCUS HALOPHILUS; TETRAGENOCOCCUS KOREENSIS; TYPE STRAIN;

BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; DNA, BACTERIAL; DNA, RIBOSOMAL; FATTY ACIDS; FERMENTATION; GENES, RRNA; GLYCOLIPIDS; GRAM-POSITIVE COCCI; KOREA; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; VEGETABLES;

POSIBACTERIA; TETRAGENOCOCCUS; TETRAGENOCOCCUS HALOPHILUS;

EID: 22544456010     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.63448-0     Document Type: Article

References (23)

1. Buck, J. D. (1982). Nonstaining (KOH) method for determination of Gram reactions of marine bacteria. Appl Environ Microbiol 44, 992-993.
2. Chung, W. & Hancock, R. E. W. (2000). Action of lysozyme and nisin mixtures against lactic acid bacteria. Int J Food Microbiol 60, 25-32.
3. Collins, M. D., Williams, A. M. & Wallbanks, S. (1990). The phylogeny of Aerococcus and Pediococcus as determined by 16S rRNA sequence analysis: description of Tetragenococcus gen. nov. FEMS Microbiol Lett 70, 255-262.
4. Ennahar, S. & Cai, Y. (2005). Biochemical and genetic evidence for the transfer of Enterococcus solitarius Collins et al. 1989 to the genus Tetragenococcus as Tetragenococcus solitarius comb. nov. Int J Syst Evol Microbiol 55, 589-592.
5. Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
6. Garrity, G. M. & Holt, J. G. (2001). The road map to the Manual. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 1, pp. 119-166. Edited by G. M. Garrity, D. R. Boone & R. W. Castenholz. New York: Springer.
7. Haba, E., Espuny, M. J., Busquets, M. & Manresa, A. (2000). Screening and production of rhamnolipids by Pseudomonas aeruginosa 47T2 NCIB 40044 from waste frying oils. J Appl Microbiol 88, 379-387.
8. Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
9. Hugh, R. & Leifson, E. (1953). The taxonomic significance of fermentative versus oxidative metabolism of carbohydrates by various gram negative bacteria. J Bacteriol 66, 24-26.
10. Kimura, M. (1983). The Neutral Theory of Molecular Evolution. Cambridge: Cambridge University Press.
11. Kosaric, N. (1987). Integrated process for continuous rhamnolipid biosynthesis. Biosurfactants production, properties, applications. In Surfactant Science Series, vol. 48, pp. 157-173. New York: Marcel Dekker.
12. Kumar, S., Tamura, K., Jakobsen, I. B. & Nei, M. (2001). MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17, 1244-1245.
13. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
14. Rahman, K. S. M., Rahman, T. J., McClean, S., Marchant, R. & Banat, I. M. (2002). Rhamnolipid biosurfactant production by strains of Pseudomonas aeruginosa using low-cost raw materials. Biotechnol Prog 18, 1277-1281.
15. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
16. Sasser, M. (1990). Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids. MIDI Technical Note 101. Newark, DE: MIDI.
17. Satomi, M., Kimura, B., Mizoi, M., Sato, T. & Fujii, T. (1997). Tetragenococcus muriaticus sp. nov., a new moderately halophilic lactic acid bacterium isolated from fermented squid liver sauce. Int J Syst Bacteriol 47, 832-836.
18. Schleifer, K. H. (1985). Analysis of the chemical composition and primary structure of murein. Methods Microbiol 18, 123-156.
19. Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
20. Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
21. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
22. Yoon, J.-H., Lee, S. T. & Park, Y.-H. (1998). Inter- and intraspecific phylogenetic analysis of the genus Nocardioides and related taxa based on 16S rDNA sequences. Int J Syst Bacteriol 48, 187-194.
23. Zajic, J. & Seffens, W. (1984). Biosurfactants. Crit Rev Biotechnol 12, 87-107.