The structure of the 80S ribosome from Trypanosoma cruzi reveals unique rRNA components

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 29, 2005, Pages 10206-10211

  Gao, Haixiao ^a   Ayub, Maximiliane Juri ^c   Levin, Mariano J ^c   Frank, Joachim ^a,b  

^a HOWARD HUGHES MEDICAL INSTITUTE   (United States)

^b STATE UNIVERSITY OF NEW YORK   (United States)

^c INSTITUTO DE INVESTIGACIONES EN INGENIERÍA GENÉTICA Y BIOLOGÍA MOLECULAR   (Argentina)

Author keywords

Eukaryote; Initiation; Translation

Indexed keywords

MESSENGER RNA; RIBOSOME RNA;

80S RIBOSOME SUBUNIT; ARTICLE; CHAGAS DISEASE; CRYOELECTRON MICROSCOPY; EUKARYOTE; GENETIC CONSERVATION; NONHUMAN; PRIORITY JOURNAL; RIBOSOME SUBUNIT; RNA STRUCTURE; RNA TRANSLATION; STRUCTURE ANALYSIS; TRANSLATION INITIATION; TRYPANOSOMA CRUZI;

ANIMALS; BASE PAIRING; CRYOELECTRON MICROSCOPY; IMAGE PROCESSING, COMPUTER-ASSISTED; MODELS, MOLECULAR; RIBOSOMES; RNA, RIBOSOMAL; TRYPANOSOMA CRUZI;

EUKARYOTA; KINETOPLASTIDA; PROTOZOA; TRYPANOSOMA CRUZI;

EID: 22544453281     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0500926102     Document Type: Article

References (33)

1. Walder, J. A., Eder, P. S., Engman, D. M., Brentano, S. T., Walder, R. Y., Knutzon, D. S., Dorfman, D. M. & Donelson, J. E. (1986) Science 233, 569-571.
2. Murphy, W. J., Watkins, K. P. & Agabian, N. (1986) Cell 47, 517-525.
3. Sutton, R. E. & Boothroyd, J. C. (1986) Cell 47, 527-535.
4. Perry, K. L., Watkins, K. P. & Agabian, N. (1987) Proc. Natl. Acad. Sci. USA 84, 8190-8194.
5. Freistadt, M. S., Cross, G. A. & Robertson, H. D. (1988) J. Biol. Chem. 263, 15071-15075.
6. Bangs, J. D., Crain, P. F., Hashizume, T., McCloskey, J. A. & Boothroyd, J. C. (1992) J. Biol. Chem. 267, 9805-9815.
7. Lewdorowicz, M., Yoffe, Y., Zuberek, J., Jemielity, J., Stepinski, J., Kierzek, R., Stolarski, R., Shapira, M. & Darzynkiewicz, E. (2004) RNA 10, 1469-1478.
8. Preiss, T. & Hentze, M. W. (2003) BioEssays 25, 1201-1211.
9. Maroney, P. A., Denker, J. A., Darzynkiewicz, E., Laneve, R. & Nilsen, T. W. (1995) RNA 1, 714-723.
10. Lall, S., Friedmann, C. C., Jankowska-Anyszka, M., Stepinksi, J., Darzynkiewicz, E. & Davis, R. E. (2004) J. Biol. Chem. 279, 45573-45585.
11. Aline, R. F., Jr., Scholler, J. K. & Stuart, K. (1989) Mol. Biochem. Parasitol. 32, 169-178.
12. Liou, R. F. & Blumenthal, T. (1990) Mol. Cell. Biol. 10, 1764-1768.
13. Zeiner, G. M., Sturm, N. R. & Campbell, D. A. (2003) J. Biol. Chem. 278, 38269-38275.
14. Gomez, E. B., Medina, G., Ballesta, J. P. G., Levin, M. J. & Tellez-Inon, M. T. (2001) Int. J. Parasitol. 31, 1032-1039.
15. Gabashvili, I. S., Agrawal, R. K., Spann, C. M. T., Grassucci, R. A., Frank, J. & Penczek, P. (2000) Cell 100, 537-549.
16. Spann, C. M. T., Penczek, P., Leith, A. & Frank, J. (2000) Structure (London) 8, 937-948.
17. Frank, J., Radermacher, M., Penczek, P., Zhu, J., Li, Y., Ladjadj, M. & Leith, A. (1996) J. Struct. Biol. 116, 190-199.
18. Jones, T. A., Zhou, J. Y., Cowan, S. W. & Kjeldgaard, M. (1991) Acta Crystallogr. A 47, 110-119.
19. Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C. & Ferrin, T. E. (2004) J. Comput. Chem. 25, 1605-1612.
20. Frank, J. (1996) Three-Dimensional Electron Microscopy of Macromolecular Assemblies (Academic, New York).
21. Spahn, C. M. T., Gomez-Lorenzo, M. G., Grassucci, G. A., Jorgensen, R., Andersen, G. R., Beckmann, R., Penczek, P. A., Ballesta, J. P. G. & Frank, J. (2004) EMBO J. 23, 1008-1019.
22. Link, A. J., Eng, J., Schieltz, D. M., Carmack, E., Mize, G. J., Morris, D. R., Garvik, B. M. & Yates, J. R., III (1999) Nat. Biotechnol. 17, 676-682.
23. Sengupta, J., Nilsson, J., Gursky, R., Spahn, C. M. T., Nissen, P. & Frank, J. (2004) Nat. Struct. Mol. Biol. 11, 957-962.
24. Frank, J. (2003) Genome Biol. 4, 237.
25. Wuyts, J., De Rijk, P., Van de Peer, Y., Pison, G., Rousseeuw, P. & De Wachter, R. (2000) Nucleic Acids Res. 28, 4698-4708.
26. Gerbi, S. A. (1996) in Ribosomal RNA. Structure, Evolution, Processing, and Function in Protein Synthesis, eds. Zimmermann, R. A. & Dahlberg, A. E. (CRC Press, New York), pp. 71-87.
27. Spahn, C. M. T., Jan, E., Mulder, A., Grassucci, R. A., Sarnow, P. & Frank, J. (2004) Cell 118, 465-475.
28. Gomez-Lorenzo, M. G., Spahn, C. M. T., Agrawal, R. K., Grassucci, R. A., Penczek, P., Chakraburtty, K., Ballesta, J. P. G., Lavandera, J. L., Garcia-Bustos, J. F. & Frank, J. (2000) EMBO J. 19, 2710-2718.
29. Cannone, J. J., Subramanian, S., Schnare, M. N., Collett, J. R., D'Souza, L. M., Du, Y., Feng, B., Lin, N., Madabusi, L. V., Muller, K. M., et al. (2002) BMC Bioinformatics 3, 2.
30. Kapp, L. D. & Lorsch, J. R. (2004) Annu. Rev. Biochem. 73, 657-704.
31. Yoffe, Y., Zuberek, J., Lewdorowicz, M., Zeira, Z., Keasar, C., Orr-Dahan, I., Jankowska-Anyszka, M., Stepinski, J., Darzynkiewicz, E. & Shapira, M. (2004) RNA 10, 1764-1775.
32. Dhalia, R., Reis, C. R. S., Freire, E. R., Rocha, P. O., Katz, R., Muniz, J. R. C., Standart, N. & de Melo Neto, O. P. (2005) Mol. Biochem. Parasitol. 140, 23-41.
33. Hellen, C. U. T. & Sarnow, P. (2001) Genes Dev. 15, 1593-1612.