Structure and function of carbonic anhydrases from Mycobacterium tuberculosis

Journal of Biological Chemistry

Volumn 280, Issue 19, 2005, Pages 18782-18789

  Covarrubias, Adrian Suarez ^a   Larsson, Anna M ^a   Högbom, Martin ^a   Lindberg, Jimmy ^a   Bergfors, Terese ^a   Björkelid, Christofer ^a   Mowbray, Sherry L ^b   Unge, Torsten ^a   Jones, T Alwyn ^a,c  

^a UPPSALA UNIVERSITY   (Sweden)

^b SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^c UPPSALA UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; BIOASSAY; BIOSYNTHESIS; DISEASES; HYDRATION; MOLECULAR STRUCTURE; PH EFFECTS; ZINC;

BICARBONATE; CARBONIC ANHYDRASE; MYCOBACTERIUM TUBERCULOSIS; PH HOMEOSTASIS;

ENZYMES;

BACTERIAL DNA; BACTERIAL ENZYME; CARBONATE DEHYDRATASE; ASPARTIC ACID; INORGANIC SALT; ION; LIGAND; METAL; SERINE; SOLVENT; ZINC;

ARTICLE; CRYSTALLIZATION; ENZYME ASSAY; ENZYME STRUCTURE; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROTEIN EXPRESSION; STRUCTURE ANALYSIS; TUBERCULOSIS; AMINO ACID SEQUENCE; BINDING SITE; CHEMICAL STRUCTURE; CHEMISTRY; DIMERIZATION; ENZYMOLOGY; MOLECULAR CLONING; MOLECULAR GENETICS; MULTIGENE FAMILY; PH; PHYSIOLOGY; PROTEIN CONFORMATION; PROTEIN TERTIARY STRUCTURE; STRUCTURE ACTIVITY RELATION; TIME; X RAY CRYSTALLOGRAPHY;

MYCOBACTERIUM TUBERCULOSIS;

AMINO ACID SEQUENCE; ASPARTIC ACID; BINDING SITES; CARBONIC ANHYDRASES; CLONING, MOLECULAR; CRYSTALLOGRAPHY, X-RAY; DIMERIZATION; HYDROGEN-ION CONCENTRATION; IONS; LIGANDS; METALS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; MYCOBACTERIUM TUBERCULOSIS; PROTEIN CONFORMATION; PROTEIN STRUCTURE, TERTIARY; SALTS; SERINE; SOLVENTS; STRUCTURE-ACTIVITY RELATIONSHIP; TIME FACTORS; ZINC;

EID: 21444449107     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M414348200     Document Type: Article

References (40)

1. Cole, S. T., Brosch, R., Parkhill, J., Garnier, T., Churcher, C., Harris, D., Gordon, S. V., Eiglmeier, K., Gas, S., Barry, C. E., III, Tekaia, F., Badcock, K., Basham, D., Brown, D., Chillingworth, T., Connor, R., Davies, R., Devlin, K., Feltwell, T., Gentles, S., Hamlin, N., Holroyd, S., Hornsby, T., Jagels, K., Krogh, A., McLean, J., Moule, S., Murphy, L., Oliver, K., Osborne, J., Quail, M. A., Rajandream, M.-A., Rogers, J., Rutter, S., Seeger, K., Skelton, J., Squares, R., Squares, S., Sulston, J. E., Taylor, K., Whitehead, S., and Barrell, B. G. (1998) Nature 393, 537-544
2. Sassetti, C. M., and Rubin, E. J. (2003) Proc. Natl. Acad. Sci. U. S.A. 100, 12989-12994
3. Sassetti, C. M., Boyd, D. H., and Rubin, E. J. (2003) Mol. Microbiol. 48, 77-84
4. Betts, J. C., Lukey, P. T., Robb, L. C., McAdam, R. A., and Duncan, K. (2002) Mol. Microbiol. 43, 717-731
5. Smith, K. S., Jakubzick, C., Whittam, T. S., and Ferry, J. G. (1999) Proc. Natl. Acad. Sci. U. S. A. 86, 15184-15189
6. Lindskog, S., and Liljas, A. (1993) Curr. Opin. Struct. Biol. 3, 915-920
7. Supuran, C. T., Scozzafava, A., and Casini, A. (2003) Med. Res. Rev. 23, 146-189
8. Armstrong, J. M., Myers, D. V., Verpoorte, J. A., and Edsall, J. T. (1966) J. Biol. Chem. 241, 5137-5149
9. Khalifah, R. G. (1971) J. Biol. Chem. 246, 2561-2673
10. McPherson, A. J. (1982) Preparation and Analysis of Protein Crystals, John Wiley and Sons, New York
11. Leslie, A. G. (1999) Acta Crystallogr. Sect. D55, 1696-1702
12. Evans, P. R. (1993) Proceedings of CCP4 Study Weekend on Data Collection & Processing, pp. 114-122, Daresbury Laboratory, Warrington, England, United Kingdom
13. Collaborative Computational Project Number 4. (1994) Acta Crystallogr. D50, 760-763
14. Otwinowski, Z., and Minor, W. (1997) Methods Enzymol. 276, 307-326
15. Navaza, J. (1994) Acta Crystallogr. A50, 157-163
16. Strop, P., Smith, K. S., Iverson, T. M., Ferry, J. G., and Rees, D. C. (2001) J. Biol. Chem. 276, 10299-10305
17. Kleywegt, G. J., Zou, J. Y., Rjeldgaard, M., and Jones, T. A. (2001) in International Tables for Crystallography: Crystallography of Biological Macromolecules (Rossmann, M. G., and Arnold, E., eds) Vol. F, pp. 353-356, Kluwer Academic Publishers, Dordrecht, The Netherlands
18. Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Acta Crystallogr. D53, 240-255
19. Potterton, E., Briggs, P., Turkenburg, M., and Dodson, E. (2003) Acta Crystallogr. D59, 1131-1137
20. Jones, T. A., Zou, J.-Y., Cowan, S. W., and Kjeldgaard, M. (1991) Acta Crystallogr. A47, 110-119
21. Winn, M. D., Isupov, M. N., and Murshudov, G. N. (2001) Acta Crystallogr. D57, 122-133
22. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Acta Crystallogr. D54, 905-921
23. Cronk, J. D., Endrizzi, J. A., Cronk, M. R., O'Neill J. W., and Zhang, K. Y. (2001) Protein Sci. 10, 911-922
24. Mitsuhashi, S., Mizushima, T., Yamashita, E., Yamamoto, M., Kumasaka, T., Moriyama, H., Ueki, T., Miyachi, S., and Tsukihara, T. (2000) J. Biol. Chem. 275, 5521-5526
25. Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N., and Bourne, P. E. (2000) Nucleic Acids Res. 28, 235-242
26. Kimber, M. S., and Pai, E. F. (2000) EMBO J. 19, 1407-1418
27. Kleywegt, G. J., and Jones, T. A. (1997) Methods Enzymol. 277, 525-545
28. Branden, C. I., and Tooze, J. (1999) Introduction to Protein Structure, Garland Publishing, New York
29. Jones, T. A., and Thirup, S. (1986) EMBO J. 5, 819-822
30. Smith, K. S., and Ferry, J. G. (1999) J. Bacteriol. 181, 6247-6253
31. Lindskog, S. (1997) Pharmacol. Ther. 74, 1-20
32. Palmberg, P. (1995) Arch. Ophthalmol. 113, 985-986
33. Maren, T. H. (1995) J. Glaucoma 4, 49-62
34. Smith, K. S., Ingram-Smith, C., and Ferry, J. G. (2002) J. Bacteriol. 184, 4240-4245
35. Rowlett, R. S., Tu, C., McKay, M. M., Preiss, J. R., Loomis, R. J., Hicks, K. A., Marchione, R. J., Strong, J. A., Donovan, G. S., Jr., and Chamberlin, J. E. (2002) Arch. Biochem. Biophys. 404, 197-209
36. Holm, L., and Sander, C. (1997) Nucleic Acids Res. 25, 231-234
37. Kleywegt, G. J. (1999) J. Mol. Biol. 285, 1887-1897
38. Merlin, C., Masters, M., McAteer, S., and Coulson, A. (2003) J. Bacteriol. 185, 6415-6424
39. Engh, R. A., and Huber, R. (1991) Acta Crystallogr. A47, 392-400
40. Kleywegt, G. J., and Jones, T. A. (1996) Structure (Lond.) 4, 1395-1400