Protein sequence tags: A novel solution for comparative proteomics

Proteomics

Volumn 5, Issue 9, 2005, Pages 2364-2368

  Kuhn, Karsten ^a   Prinz, Thorsten ^a   Schäfer, Jürgen ^a   Baumann, Christian ^a   Schärfke, Marco ^a   Kienle, Stefan ^a   Schwarz, Josef ^a   Steiner, Sandra ^a   Hamon, Christian ^a  

^a Proteome Sciences R and D GmbH and Co KG   (Germany)

Author keywords

Comparative proteomics; Global protein analysis; Membrane proteins; Protein sequence tag; Quantitative protein sequence tag

Indexed keywords

MEMBRANE PROTEIN; NUCLEAR PROTEIN;

AMINO ACID SEQUENCE; ANIMAL CELL; COMPARATIVE PROTEOMICS; COMPARATIVE STUDY; CONFERENCE PAPER; HUMAN; ISOTOPE LABELING; MASS SPECTROMETRY; MOUSE; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN SEQUENCE TAG; PROTEOMICS; QUANTITATIVE ANALYSIS; TECHNOLOGY;

AMINO ACID SEQUENCE; ANIMALS; CARBON ISOTOPES; FUNGAL PROTEINS; HUMANS; MASS SPECTROMETRY; MEMBRANE PROTEINS; MICE; MOLECULAR SEQUENCE DATA; NUCLEAR PROTEINS; PEPTIDES; PROTEOME; PROTEOMICS;

EID: 20644456896     PISSN: 16159853     EISSN: None     Source Type: Journal    
DOI: 10.1002/pmic.200401306     Document Type: Conference Paper

References (27)

1. Adam, G. C., Burbaum, J., Kozarich, J. W., Patricelli, M. P. et al., J. Am. Chem. Soc. 2004, 126, 1363-1368.
2. Zhang, H., Li, X. J., Martin, D. B., Aebersold, R., Nat. Biotechnol. 2003, 21, 660-666.
3. Gevaert, K., Van Damme, J., Goethals, M., Thomas, G. R. et al., Mol. Cell. Proteomics 2002, 1, 896-903.
4. Oda, Y., Huang, K., Cross, F. R., Cowburn, D, Chait, B. T., Proc. Natl. Acad. Sci. USA 1999, 96, 6591-6596.
5. Julka, S., Regnier, F., J. Proteome Res. 2004, 3, 350-363.
6. Zhang, H., Van, W., Aebersold, R., Curr. Opin. Chem. Biol. 2004, 8, 66-75.
7. Leitner, A., Lindner, W., J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 2004, 873, 1-26.
8. Moritz, B., Meyer, H. E., Proteomics 2003, 3, 2208-2220.
9. Gygi, S. P., Rist, B., Gerber, S. A., Turecek, F. et al., Nat. Biotechnol. 1999, 17, 994-999.
10. Thompson, A., Schafer, J., Kuhn, K., Kienle, S. et al., Anal. Chem. 2003, 75, 1895-1904.
11. Ross, P. L., Huang, Y. N., Marchese, J. N., Williamson, B. et al., Mol. Cell. Proteomics 2004, 3, 1154-1169.
12. Kuhn, K., Thompson, A., Prinz, T, Muller, J. et al., J. Proteome Res. 2003, 2, 598-609.
13. Prinz, T., Muller, J., Kuhn, K., Schafer, J. et al., J. Proteome Res. 2004, 3, 1073-1081.
14. Eng, J. K., McCormack, A. L., Yates, J. R. 3rd, J. Am. Soc. Mass Spectrom. 1994, 5, 976-989.
15. Santoni, V., Molloy, M., Rabilloud, T., Electrophoresis 2000, 21, 1054-1070.
16. Rabilloud, T., Nat. Biotechnol. 2003, 21, 508-510.
17. Han, D. K., Eng, J., Zhou, H., Aebersold, R., Nat. Biotechnol. 2001, 19, 946-951.
18. Wu, C. C., Mac Coss, M. J., Howell, K. E., Yates, J. R., Nat. Biotechnol. 2003, 21, 532-538.
19. Drews, J., Science 2000, 287, 1960-1964.
20. Hopkins, A. L., Groom, C. R., Nat. Rev. Drug Discov. 2002, 1, 727-730.
21. Drawid, A., Jansen, R., Gerstein, M., Trends Genet. 2000, 16, 426-430.
22. Desrivieres, S., Prinz, T., Castro-Palomino Laria, N., Meyer, M. et al., Mol. Cell. Proteomics 2003, 2, 1039-1054.
23. Sealey, L., Chalkley, R., Mol. Cell. Biol. 1987, 7, 787-798.
24. Pieper, R., Su, Q., Gatlin, C. L., Huang, S. T. et al., Proteomics 2003, 3, 422-432.
25. Wolters, D. A., Washburn, M. P., Yates, J. R. 3rd, Anal. Chem. 2001, 73, 5683-5690.
26. Gygi, S. P., Rist, B., Griffin, T. J., Eng, J., Aebersold, R., J. Proteome Res. 2002, 1, 47-54.
27. Literature overview available at: http://www.uni-greifswald.de/~genetik/ Backup_Schueller/genetik82.html