메뉴 건너뛰기




Volumn 41, Issue 4, 2005, Pages 366-377

Some conclusions on the role of redundant DNA and the mechanisms of eukaryotic genome evolution inferred from studies of chromatin diminution in Cyclopoida

Author keywords

[No Author keywords available]

Indexed keywords

DNA; REPETITIVE DNA; SPACER DNA;

EID: 20044394222     PISSN: 10227954     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11177-005-0100-2     Document Type: Review
Times cited : (6)

References (51)
  • 1
    • 76549240988 scopus 로고
    • The Deoxyribonucleic Acid Content of Animal Cells and Its Evolutionary Significance
    • Mirsky, A.E. and Ris, H., The Deoxyribonucleic Acid Content of Animal Cells and Its Evolutionary Significance, J. Gen. Physiol., 1951, vol. 34, pp. 451-462.
    • (1951) J. Gen. Physiol. , vol.34 , pp. 451-462
    • Mirsky, A.E.1    Ris, H.2
  • 2
    • 0035058360 scopus 로고    scopus 로고
    • Evolution of Genome Size: New Approaches to an Old Problem
    • Petrov, D.A., Evolution of Genome Size: New Approaches to an Old Problem, Trends Genet., 2001, vol. 17, pp. 23-28.
    • (2001) Trends Genet. , vol.17 , pp. 23-28
    • Petrov, D.A.1
  • 3
    • 0035090476 scopus 로고    scopus 로고
    • Coincidence, Coevolution, or Causation? DNA Content, Cell Size, and C-Value Enigma
    • Gregory, T.R., Coincidence, Coevolution, or Causation? DNA Content, Cell Size, and C-Value Enigma, Biol. Rev., 2001, vol. 76, pp. 65-101.
    • (2001) Biol. Rev. , vol.76 , pp. 65-101
    • Gregory, T.R.1
  • 4
    • 0035895513 scopus 로고    scopus 로고
    • What if There Are only 30 000 Human Genes?
    • Claveril, J.-M., What If There Are Only 30 000 Human Genes?, Science, 2001, vol. 291, pp. 1255-1257.
    • (2001) Science , vol.291 , pp. 1255-1257
    • Claveril, J.-M.1
  • 5
    • 0032088246 scopus 로고    scopus 로고
    • Genome Size and Intron Size in Drosophila
    • Moriyama, E.N., Petrov, D.A., and Hartl, D.L., Genome Size and Intron Size in Drosophila, Mol. Biol. Evol., 1998, vol. 15, pp. 770-773.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 770-773
    • Moriyama, E.N.1    Petrov, D.A.2    Hartl, D.L.3
  • 6
    • 0346355404 scopus 로고    scopus 로고
    • Chromatin Diminution as a Key Process Explaining the Eukaryotic Genome Size Paradox and Some Mechanisms of Genetic Isolation
    • Akifyev, A.P., Grishanin, A.K., and Degtyarev, S.V., Chromatin Diminution as a Key Process Explaining the Eukaryotic Genome Size Paradox and Some Mechanisms of Genetic Isolation, Rus. J. Genet., 2002, vol. 38, no. 5, pp. 486-495.
    • (2002) Rus. J. Genet. , vol.38 , Issue.5 , pp. 486-495
    • Akifyev, A.P.1    Grishanin, A.K.2    Degtyarev, S.V.3
  • 8
    • 2042437650 scopus 로고    scopus 로고
    • Initial Sequencing and Analysis of the Human Genome
    • International Human Genome Consortium, Initial Sequencing and Analysis of the Human Genome, Nature, 2001, vol. 409, pp. 860-921.
    • (2001) Nature , vol.409 , pp. 860-921
  • 9
    • 0035865397 scopus 로고    scopus 로고
    • Our Genome Unveiled
    • Baltimore, D., Our Genome Unveiled, Nature, 2001, vol. 409, pp. 814-816.
    • (2001) Nature , vol.409 , pp. 814-816
    • Baltimore, D.1
  • 10
    • 0000822856 scopus 로고
    • The Genetic Organization of Chromosomes
    • Tomas, C.A., The Genetic Organization of Chromosomes, Annu. Rev. Genet., 1971, vol. 5, pp. 237-256.
    • (1971) Annu. Rev. Genet. , vol.5 , pp. 237-256
    • Tomas, C.A.1
  • 11
    • 0041828230 scopus 로고    scopus 로고
    • Is Small Indel Bias a Determinant of Genome Size
    • Gregory, T.R., Is Small Indel Bias a Determinant of Genome Size, Trends Genet., 2003, vol. 19, pp. 485-488.
    • (2003) Trends Genet. , vol.19 , pp. 485-488
    • Gregory, T.R.1
  • 12
    • 0018199859 scopus 로고
    • Nuclear Volume: Control by Nucleoskeletal DNA, Selection for Cell Volume and Cell Growth Rate and the Solution of the DNA C-Value Paradox
    • Cavalier-Smith, T., Nuclear Volume: Control by Nucleoskeletal DNA, Selection for Cell Volume and Cell Growth Rate and the Solution of the DNA C-Value Paradox, J. Cell Sci., 1978, vol. 34, pp. 247-278.
    • (1978) J. Cell Sci. , vol.34 , pp. 247-278
    • Cavalier-Smith, T.1
  • 13
    • 0032555223 scopus 로고    scopus 로고
    • Buffering: A Possible Passive-Homeostasis Role for Redundant DNA
    • Vinogradov, A.E., Buffering: A Possible Passive-Homeostasis Role for Redundant DNA, J. Theor. Biol., 1998, vol. 193, pp. 197-199.
    • (1998) J. Theor. Biol. , vol.193 , pp. 197-199
    • Vinogradov, A.E.1
  • 14
    • 0344198600 scopus 로고    scopus 로고
    • Cell Size As a Link between Noncoding DNA and Metabolic Rate Scaling
    • Kozlovski, J., Konarzewski, M., and Gavelczyk, Cell Size As a Link between Noncoding DNA and Metabolic Rate Scaling, Proc. Natl. Acad. Sci. USA, 2003, vol. 100, pp. 14 080-14 085.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 14080-14085
    • Kozlovski, J.1    Konarzewski, M.2    Gavelczyk3
  • 15
    • 0035892245 scopus 로고    scopus 로고
    • Temporal Control of DNA Replication and the Adaptive Value of Chromatin Diminution in Copepods
    • Wyngaard, G.A. and Gregory, T.R., Temporal Control of DNA Replication and the Adaptive Value of Chromatin Diminution in Copepods, J. Exp. Zool. (Mol. Dev. Evol.), 2001, vol. 291, pp. 310-316.
    • (2001) J. Exp. Zool. (Mol. Dev. Evol.) , vol.291 , pp. 310-316
    • Wyngaard, G.A.1    Gregory, T.R.2
  • 16
    • 20044368363 scopus 로고    scopus 로고
    • Analogy (Parallels between Biological and Cultural Evolution)
    • Mednikov, B.M., Analogy (Parallels between Biological and Cultural Evolution), Chelovek, 2004, no. 3, pp. 12-24.
    • (2004) Chelovek , Issue.3 , pp. 12-24
    • Mednikov, B.M.1
  • 17
    • 0027346813 scopus 로고
    • Chromatin Diminution and Its Biological Significance
    • Akifyev, A.P. and Grishanin, A.K., Chromatin Diminution and Its Biological Significance, Zh. Obshch. Biol., 1993, vol. 54, pp. 5-16.
    • (1993) Zh. Obshch. Biol. , vol.54 , pp. 5-16
    • Akifyev, A.P.1    Grishanin, A.K.2
  • 18
    • 1842661586 scopus 로고    scopus 로고
    • Chromatin Diminution Accompanied by Reorganization of the Molecular Structure of the Genome: Evolutionary Aspects
    • Akif'ev, A.P., Grishanin, A.K., and Degtyarev, S.V., Chromatin Diminution Accompanied by Reorganization of the Molecular Structure of the Genome: Evolutionary Aspects, Rus. J. Genet., 1998, vol. 34, no. 6, pp. 577-584.
    • (1998) Rus. J. Genet. , vol.34 , Issue.6 , pp. 577-584
    • Akif'ev, A.P.1    Grishanin, A.K.2    Degtyarev, S.V.3
  • 19
    • 20044379667 scopus 로고    scopus 로고
    • On the Early Biological Evolution from the Genomic Standpoint
    • Shestakov, S.V., On the Early Biological Evolution from the Genomic Standpoint, Paleontol. Zh., 2003, no. 6, pp. 50-57.
    • (2003) Paleontol. Zh. , Issue.6 , pp. 50-57
    • Shestakov, S.V.1
  • 20
    • 0022462718 scopus 로고
    • The Differentiation of Germ and Somatic Cell Lines in Nematodes
    • Hennig, W., Ed., Berlin: Springer-Verlag
    • Tobler, H, The Differentiation of Germ and Somatic Cell Lines in Nematodes, Germ-Soma Differentiation, Results and Problems in Cell Differentiation, Hennig, W., Ed., Berlin: Springer-Verlag, 1986, vol. 13, pp. 1-69.
    • (1986) Germ-Soma Differentiation, Results and Problems in Cell Differentiation , vol.13 , pp. 1-69
    • Tobler, H.1
  • 21
    • 0026451325 scopus 로고
    • The Unusual Organization and Processing of Genomic DNA in Hypotrichous Ciliates
    • Prescott, D.M., The Unusual Organization and Processing of Genomic DNA in Hypotrichous Ciliates, Trends Genet., 1992, vol. 8, pp. 439-445.
    • (1992) Trends Genet. , vol.8 , pp. 439-445
    • Prescott, D.M.1
  • 22
    • 0036846746 scopus 로고    scopus 로고
    • The Origin and Evolution of Model Organisms
    • Hedges, S.B., The Origin and Evolution of Model Organisms, Nat. Genet., 2002, vol. 3, pp. 838-848.
    • (2002) Nat. Genet. , vol.3 , pp. 838-848
    • Hedges, S.B.1
  • 23
    • 0027507739 scopus 로고
    • Characterization of the Puffer Fish (Fugu) Genome As a Compact Model Vertebrate Genome
    • Brenner, S., et al., Characterization of the Puffer Fish (Fugu) Genome As a Compact Model Vertebrate Genome, Nature, 1993, vol. 366, pp. 265-268.
    • (1993) Nature , vol.366 , pp. 265-268
    • Brenner, S.1
  • 24
    • 1242274629 scopus 로고    scopus 로고
    • Major Events in the Genome Evolution of Vertebrates: Paranome Age and Size Differ Considerably between Ray-Finned Fishes and Land Vertebrates
    • Vandepoele, K., De Vos, W., Taylor, J.S., et al., Major Events in the Genome Evolution of Vertebrates: Paranome Age and Size Differ Considerably between Ray-Finned Fishes and Land Vertebrates, Proc. Natl. Acad. Sci. USA, 2004, vol. 101, pp. 1638-1643.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 1638-1643
    • Vandepoele, K.1    De Vos, W.2    Taylor, J.S.3
  • 25
    • 0017339723 scopus 로고
    • The Diminution of Heterochromatic Chromosomal Segments in Cyclops (Crustacea, Copepoda)
    • Beermann, S., The Diminution of Heterochromatic Chromosomal Segments in Cyclops (Crustacea, Copepoda), Chromosoma, 1977, vol. 60, pp. 297-344.
    • (1977) Chromosoma , vol.60 , pp. 297-344
    • Beermann, S.1
  • 26
    • 0018834276 scopus 로고
    • Chromatin Rings As Product of Chromatin Diminution in Cyclops furcifer
    • Beermann, S. and Meyer, G.F., Chromatin Rings As Product of Chromatin Diminution in Cyclops furcifer, Chromosoma, 1980, vol. 77, pp. 277-284.
    • (1980) Chromosoma , vol.77 , pp. 277-284
    • Beermann, S.1    Meyer, G.F.2
  • 27
    • 0021166229 scopus 로고
    • Circular and Linear Structure in Chromatin Diminution of Cyclops
    • Beermann, S., Circular and Linear Structure in Chromatin Diminution of Cyclops, Chromosoma, 1984, vol. 89, pp. 277-284.
    • (1984) Chromosoma , vol.89 , pp. 277-284
    • Beermann, S.1
  • 28
    • 0345135838 scopus 로고    scopus 로고
    • Chromatin Diminution in Cyclops kolensis (Copepoda, Crustacea) Is a Unique Example of Genetic Engineering in Nature
    • Grishanin, A.K., Khudolii, G.A., Shaikhaev, G.O., et al., Chromatin Diminution in Cyclops kolensis (Copepoda, Crustacea) Is a Unique Example of Genetic Engineering in Nature, Rus. J. Genet., 1996, vol. 32, no. 4, pp. 424-430.
    • (1996) Rus. J. Genet. , vol.32 , Issue.4 , pp. 424-430
    • Grishanin, A.K.1    Khudolii, G.A.2    Shaikhaev, G.O.3
  • 29
    • 0034027756 scopus 로고    scopus 로고
    • Interpopulation Differentiation within C. kolensis and C. strenuus strenuus (Crustacea, Copepoda): Evidence from Cytogenetic Methods
    • Grishanin, A.K. and Akifyev, A.P., Interpopulation Differentiation within C. kolensis and C. strenuus strenuus (Crustacea, Copepoda): Evidence from Cytogenetic Methods, Hydrobiologia, 2000, vol. 417, pp. 37-42.
    • (2000) Hydrobiologia , vol.417 , pp. 37-42
    • Grishanin, A.K.1    Akifyev, A.P.2
  • 30
    • 0015338801 scopus 로고
    • Genetic Monomorphism of a Species and Its Biological Significance
    • Altukhov, Yu.P. and Rychkov, Yu.G., Genetic Monomorphism of a Species and Its Biological Significance, Zh. Obshch. Biol., 1972, vol. 33, pp. 281-300.
    • (1972) Zh. Obshch. Biol. , vol.33 , pp. 281-300
    • Altukhov, Yu.P.1    Rychkov, Yu.G.2
  • 31
    • 1842538960 scopus 로고
    • Somatic Cells of Cyclops strenuus (Copepoda, Crustacea) Lose More Than 90% of the Genome As a Result of Chromatin Diminution
    • Grishanin, A.K., Brodskii, V.Ya., and Akifyev, A.P., Somatic Cells of Cyclops strenuus (Copepoda, Crustacea) Lose More Than 90% of the Genome As a Result of Chromatin Diminution, Dokl. Akad. Nauk, 1994, vol. 338, pp. 708-710.
    • (1994) Dokl. Akad. Nauk , vol.338 , pp. 708-710
    • Grishanin, A.K.1    Brodskii, V.Ya.2    Akifyev, A.P.3
  • 32
    • 4143069182 scopus 로고    scopus 로고
    • Nuclear DNA and Remarks on Chromatin Diminution in Cyclopoida
    • Grishanin, A.K., Dahms, H.-U., and Akifyev, A.P., Nuclear DNA and Remarks on Chromatin Diminution in Cyclopoida, Zool. Studies, 2004, vol. 43, pp. 300-303.
    • (2004) Zool. Studies , vol.43 , pp. 300-303
    • Grishanin, A.K.1    Dahms, H.-U.2    Akifyev, A.P.3
  • 33
    • 0036426740 scopus 로고    scopus 로고
    • DNA Nucleotide Sequences Eliminated from C. kolensis Somatic Cells by Chromatin Diminution
    • Degtyarev, S.V., Grishanin, A.K., Belyakin, S.N., et al., DNA Nucleotide Sequences Eliminated from C. kolensis Somatic Cells by Chromatin Diminution, Dokl. Rus. Akad. Nauk, 2002, vol. 384, pp. 255-258.
    • (2002) Dokl. Rus. Akad. Nauk , vol.384 , pp. 255-258
    • Degtyarev, S.V.1    Grishanin, A.K.2    Belyakin, S.N.3
  • 34
    • 8744292023 scopus 로고    scopus 로고
    • The Molecular Structure of the DNA Fragments Eliminated during Chromatin Diminution in Cyclops kolensis
    • Degtyarev, S., Boykova, T., Grishanin, A., et al., The Molecular Structure of the DNA Fragments Eliminated during Chromatin Diminution in Cyclops kolensis, Genome Res., 2004, vol. 14, no. 11, pp. 2287-2294.
    • (2004) Genome Res. , vol.14 , Issue.11 , pp. 2287-2294
    • Degtyarev, S.1    Boykova, T.2    Grishanin, A.3
  • 35
    • 0029360612 scopus 로고
    • Concerted Evolution of Repetitive DNA Sequences in Eukaryotes
    • Elder, J.F. and Turner, B.J., Concerted Evolution of Repetitive DNA Sequences in Eukaryotes, Q. Rev. Biol., 1995, vol. 70, pp. 297-320.
    • (1995) Q. Rev. Biol. , vol.70 , pp. 297-320
    • Elder, J.F.1    Turner, B.J.2
  • 36
    • 0033947138 scopus 로고    scopus 로고
    • Concerted Evolution of Highly Repetitive DNA Family in Eptatretidae (Cyclostomata, Agnata) Implies Specifically Differential Homogenization and Amplification Events in Their Germ Cells
    • Nabeyama, M., Kubota, S., and Kohno, S., Concerted Evolution of Highly Repetitive DNA Family in Eptatretidae (Cyclostomata, Agnata) Implies Specifically Differential Homogenization and Amplification Events in Their Germ Cells, J. Mol. Evol., 2000, vol. 50, pp. 154-169.
    • (2000) J. Mol. Evol. , vol.50 , pp. 154-169
    • Nabeyama, M.1    Kubota, S.2    Kohno, S.3
  • 37
    • 1642431644 scopus 로고    scopus 로고
    • Chromatin Diminution Leads to Rapid Evolutionary Charges in the Organization of the Germ Line Genomes of the Parasitic Nematodes A. suum and P. univalens
    • Bachmann-Waldmann, C., Jentsch, S., Tobler, H., and Muller, F., Chromatin Diminution Leads to Rapid Evolutionary Charges in the Organization of the Germ Line Genomes of the Parasitic Nematodes A. suum and P. univalens, Mol. Biochem. Parasitol., 2004, vol. 134, pp. 53-64.
    • (2004) Mol. Biochem. Parasitol. , vol.134 , pp. 53-64
    • Bachmann-Waldmann, C.1    Jentsch, S.2    Tobler, H.3    Muller, F.4
  • 38
    • 0348245815 scopus 로고    scopus 로고
    • Chromosomal Radiosensitivity As Associated with Chromatin Diminution in Cyclops (Crustacea, Copepoda)
    • Grishanin, A.K., Degtyarev, S.V., and Akifyev, A.P., Chromosomal Radiosensitivity As Associated with Chromatin Diminution in Cyclops (Crustacea, Copepoda), Rus. J. Genet., 2002, vol. 38, no. 4, pp. 373-378.
    • (2002) Rus. J. Genet. , vol.38 , Issue.4 , pp. 373-378
    • Grishanin, A.K.1    Degtyarev, S.V.2    Akifyev, A.P.3
  • 39
    • 0039000767 scopus 로고
    • Mechanisms of the Production of Chromosomal Aberrations in Eukaryotic Cells
    • Akifyev, A.P., Mechanisms of the Production of Chromosomal Aberrations in Eukaryotic Cells, Physiol. Gen. Biol. Rev., 1995, vol. 10, pp. 1-56.
    • (1995) Physiol. Gen. Biol. Rev. , vol.10 , pp. 1-56
    • Akifyev, A.P.1
  • 40
    • 0021346232 scopus 로고
    • The Organization of DNA Segments Undergoing Repair Synthesis during Pachytene
    • Hotta, Y. and Stern, H., The Organization of DNA Segments Undergoing Repair Synthesis during Pachytene, Chromosoma, 1984, vol. 89, pp. 127-137.
    • (1984) Chromosoma , vol.89 , pp. 127-137
    • Hotta, Y.1    Stern, H.2
  • 41
    • 0027664926 scopus 로고
    • The Concept of Basigenome and Critical Mass of Eukaryotic Chromosomes
    • Akifyev, A.P., The Concept of Basigenome and Critical Mass of Eukaryotic Chromosomes, Dokl. Akad. Nauk, 1993, vol. 332, pp. 96-98.
    • (1993) Dokl. Akad. Nauk , vol.332 , pp. 96-98
    • Akifyev, A.P.1
  • 42
    • 0032004780 scopus 로고    scopus 로고
    • A Novel UV-Damaged DNA-Binding Protein Emerges during the Chromatin-Eliminating Cleavage Period in Ascaris suum
    • Seidl, Ch. and Moritz, K.B., A Novel UV-Damaged DNA-Binding Protein Emerges during the Chromatin-Eliminating Cleavage Period in Ascaris suum, Nucleic Acids Res., 1998, vol. 26, pp. 768-778.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 768-778
    • Seidl, Ch.1    Moritz, K.B.2
  • 46
    • 4544229722 scopus 로고    scopus 로고
    • Species-Specific Random Amplified Monomorphic DNA
    • Altukhov, Yu.P. and Abramova, A.B., Species-Specific Random Amplified Monomorphic DNA, Rus. J. Genet., 2000, vol. 36, no. 12, pp. 1411-1417.
    • (2000) Rus. J. Genet. , vol.36 , Issue.12 , pp. 1411-1417
    • Altukhov, Yu.P.1    Abramova, A.B.2
  • 48
    • 0001681307 scopus 로고
    • The Effect of Chromatin Diminution on the Pattern of C-Banding in the Chromosomes of Acanthocyclops vernalis Fischer (Copepoda: Crustacea)
    • Standiford, D.M., The Effect of Chromatin Diminution on the Pattern of C-Banding in the Chromosomes of Acanthocyclops vernalis Fischer (Copepoda: Crustacea), Genetika, 1989, vol. 79, pp. 207-214.
    • (1989) Genetika , vol.79 , pp. 207-214
    • Standiford, D.M.1
  • 49
    • 0034078166 scopus 로고    scopus 로고
    • Pattern in Genome Size in the Copepoda
    • Wyngaard, G.A. and Rasch, E.M., Pattern in Genome Size in the Copepoda, Hydrobiologia, 2000, vol. 417, pp. 43-56.
    • (2000) Hydrobiologia , vol.417 , pp. 43-56
    • Wyngaard, G.A.1    Rasch, E.M.2
  • 50
    • 0000431293 scopus 로고    scopus 로고
    • Variability and Pattern of Chromatin Diminution in the Freshwater Cyclopidae (Crustacea: Copepoda)
    • Dorward, H.M. and Wyngaard, G. A., Variability and Pattern of Chromatin Diminution in the Freshwater Cyclopidae (Crustacea: Copepoda), Arch. Hydrobiol., 1997, suppl. 107, pp. 447-465.
    • (1997) Arch. Hydrobiol. , vol.107 , Issue.SUPPL. , pp. 447-465
    • Dorward, H.M.1    Wyngaard, G.A.2
  • 51
    • 10244279597 scopus 로고
    • Silent DNA and Its Evolutionary Role
    • Akifyev, A.P., Silent DNA and Its Evolutionary Role, Priroda, 1974, vol. 9, pp. 49-54.
    • (1974) Priroda , vol.9 , pp. 49-54
    • Akifyev, A.P.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.