-
1
-
-
0042846133
-
The isolation and characterization of DNA associated with chloroplast preparations
-
Chun E.H.L., et al. The isolation and characterization of DNA associated with chloroplast preparations. J. Mol. Biol. 41:1963;130-141.
-
(1963)
J. Mol. Biol.
, vol.41
, pp. 130-141
-
-
Chun, E.H.L.1
-
2
-
-
0022546644
-
Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA
-
Ohyama K., et al. Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA. Nature. 322:1986;572-574.
-
(1986)
Nature
, vol.322
, pp. 572-574
-
-
Ohyama, K.1
-
3
-
-
0022294484
-
Comparative organization of the chloroplast genome
-
Palmer J.D. Comparative organization of the chloroplast genome. Annu. Rev. Genet. 19:1985;325-354.
-
(1985)
Annu. Rev. Genet.
, vol.19
, pp. 325-354
-
-
Palmer, J.D.1
-
4
-
-
0036225307
-
Comparative analysis of chloroplast genomes: Functional annotation, genome-based phylogeny, and deduced evolutionary patterns
-
De Las Rivas J., et al. Comparative analysis of chloroplast genomes: functional annotation, genome-based phylogeny, and deduced evolutionary patterns. Genome Res. 12:2002;567-583.
-
(2002)
Genome Res.
, vol.12
, pp. 567-583
-
-
De Las Rivas, J.1
-
5
-
-
0036845754
-
The Chlamydomonas reinhardtii plastid chromosome: Islands of genes in a sea of repeats
-
Maul J.E., et al. The Chlamydomonas reinhardtii plastid chromosome: islands of genes in a sea of repeats. Plant Cell. 14:2002;2659-2679.
-
(2002)
Plant Cell
, vol.14
, pp. 2659-2679
-
-
Maul, J.E.1
-
6
-
-
0033759528
-
The structure and gene repertoire of an ancient red algal plastid genome
-
Glöckner G., et al. The structure and gene repertoire of an ancient red algal plastid genome. J. Mol. Evol. 51:2000;382-390.
-
(2000)
J. Mol. Evol.
, vol.51
, pp. 382-390
-
-
Glöckner, G.1
-
7
-
-
0033200075
-
Gene-cluster analysis in chloroplast genomics
-
Stoebe B., Kowallik K.V. Gene-cluster analysis in chloroplast genomics. Trends Genet. 15:1999;344-347.
-
(1999)
Trends Genet.
, vol.15
, pp. 344-347
-
-
Stoebe, B.1
Kowallik, K.V.2
-
8
-
-
0036307786
-
Progress with parasite plastids
-
Wilson R.J.M. Progress with parasite plastids. J. Mol. Biol. 319:2002;257-274.
-
(2002)
J. Mol. Biol.
, vol.319
, pp. 257-274
-
-
Wilson, R.J.M.1
-
9
-
-
0033536215
-
Single gene circles in dinoflagellate chloroplast genomes
-
Zhang Z., et al. Single gene circles in dinoflagellate chloroplast genomes. Nature. 400:1999;155-159.
-
(1999)
Nature
, vol.400
, pp. 155-159
-
-
Zhang, Z.1
-
10
-
-
0033834347
-
Minicircular plastid DNA in the dinoflagellate Amphidinium operculatum
-
Barbrook A.C., Howe C.J. Minicircular plastid DNA in the dinoflagellate Amphidinium operculatum. Mol. Gen. Genet. 263:2000;152-158.
-
(2000)
Mol. Gen. Genet.
, vol.263
, pp. 152-158
-
-
Barbrook, A.C.1
Howe, C.J.2
-
11
-
-
0035210751
-
Organisation and expression of the plastid genome of the dinoflagellate Amphidinium operculatum
-
Barbrook A.C., et al. Organisation and expression of the plastid genome of the dinoflagellate Amphidinium operculatum. Mol. Genet. Genomics. 266:2001;632-638.
-
(2001)
Mol. Genet. Genomics
, vol.266
, pp. 632-638
-
-
Barbrook, A.C.1
-
12
-
-
0035929245
-
559 α) genes in tandem in Amphidinium carterae plastid DNA
-
559 α) genes in tandem in Amphidinium carterae plastid DNA. FEBS Lett. 505:2001;449-452.
-
(2001)
FEBS Lett.
, vol.505
, pp. 449-452
-
-
Hiller, R.G.1
-
13
-
-
0038480129
-
Comparison of phylogenies based on nuclear-encoded SSU rDNA and plastid-encoded psbA in the symbiotic dinoflagellate genus Symbiodinium
-
Takishita K., et al. Comparison of phylogenies based on nuclear-encoded SSU rDNA and plastid-encoded psbA in the symbiotic dinoflagellate genus Symbiodinium. Phycologia. 42:2003;285-291.
-
(2003)
Phycologia
, vol.42
, pp. 285-291
-
-
Takishita, K.1
-
14
-
-
0344465344
-
Highly organised structure in the non-coding region of the psbA minicircle from clade C Symbiodinium
-
Moore R.B., et al. Highly organised structure in the non-coding region of the psbA minicircle from clade C Symbiodinium. Int. J. Syst. Evol. Microbiol. 53:2003;1725-1734.
-
(2003)
Int. J. Syst. Evol. Microbiol.
, vol.53
, pp. 1725-1734
-
-
Moore, R.B.1
-
15
-
-
0034910778
-
A family of selfish minicircular chromosomes with jumbled chloroplast gene fragments from a dinoflagelate
-
Zhang Z., et al. A family of selfish minicircular chromosomes with jumbled chloroplast gene fragments from a dinoflagelate. Mol. Biol. Evol. 18:2001;1558-1565.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 1558-1565
-
-
Zhang, Z.1
-
16
-
-
0036215266
-
Evolution of dinoflagellate unigenic minicircles and the partially concerted divergence of their putative replicon origins
-
Zhang Z., et al. Evolution of dinoflagellate unigenic minicircles and the partially concerted divergence of their putative replicon origins. Mol. Biol. Evol. 19:2002;489-500.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 489-500
-
-
Zhang, Z.1
-
17
-
-
0033929166
-
Phylogeny of ultra-rapidly evolving dinoflagellate chloroplast genes: A possible common origin for sporozoan and dinoflagellate plastids
-
Zhang Z., et al. Phylogeny of ultra-rapidly evolving dinoflagellate chloroplast genes: a possible common origin for sporozoan and dinoflagellate plastids. J. Mol. Evol. 51:2000;26-40.
-
(2000)
J. Mol. Evol.
, vol.51
, pp. 26-40
-
-
Zhang, Z.1
-
18
-
-
1942469254
-
Novel plastid gene minicircles in the dinoflagellate Amphidinium operculatum
-
(in press).
-
Nisbet, R.E.R. et al. Novel plastid gene minicircles in the dinoflagellate Amphidinium operculatum. Gene (in press).
-
Gene
-
-
Nisbet, R.E.R.1
-
19
-
-
0037015024
-
A single origin of the peridinin- and fucoxanthin-containing plastids in dinoflagellates through tertiary endosymbiosis
-
Yoon H.S., et al. A single origin of the peridinin- and fucoxanthin-containing plastids in dinoflagellates through tertiary endosymbiosis. Proc. Natl. Acad. Sci. U. S. A. 99:2002;11724-11729.
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 11724-11729
-
-
Yoon, H.S.1
-
20
-
-
0035103466
-
Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids
-
Fast N.M., et al. Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids. Mol. Biol. Evol. 18:2001;418-426.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 418-426
-
-
Fast, N.M.1
-
21
-
-
0037047078
-
Second- and third-hand chloroplasts in dinoflagellates: Phylogeny of oxygen-evolving enhancer 1 (PsbO) protein reveals replacement of a nuclear-encoded plastid gene by that of a haptophyte tertiary endosymbiont
-
Ishida K., Green B.R. Second- and third-hand chloroplasts in dinoflagellates: phylogeny of oxygen-evolving enhancer 1 (PsbO) protein reveals replacement of a nuclear-encoded plastid gene by that of a haptophyte tertiary endosymbiont. Proc. Natl. Acad. Sci. U. S. A. 99:2002;9294-9299.
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 9294-9299
-
-
Ishida, K.1
Green, B.R.2
-
22
-
-
0036655744
-
Evolution of length variation and heteroplasmy in the chloroplast rDNA of symbiotic dinoflagellates (Symbiodinium, Dinophyta) and a novel insertion in the universal core region of the large subunit rDNA
-
Santos S.R., et al. Evolution of length variation and heteroplasmy in the chloroplast rDNA of symbiotic dinoflagellates (Symbiodinium, Dinophyta) and a novel insertion in the universal core region of the large subunit rDNA. Phycologia. 41:2002;311-318.
-
(2002)
Phycologia
, vol.41
, pp. 311-318
-
-
Santos, S.R.1
-
24
-
-
0001624070
-
Characterization of satellite DNA from three marine dinoflagellates (Dinophyceae): Glenodinium sp. two members of the toxic genus, Protogonyaulax
-
Boczar B.A., et al. Characterization of satellite DNA from three marine dinoflagellates (Dinophyceae): Glenodinium sp. two members of the toxic genus, Protogonyaulax. Plant Physiol. 97:1991;613-618.
-
(1991)
Plant Physiol.
, vol.97
, pp. 613-618
-
-
Boczar, B.A.1
-
25
-
-
0028977898
-
A nuclear-encoded form II RuBisCO in dinoflagellates
-
Morse D., et al. A nuclear-encoded form II RuBisCO in dinoflagellates. Science. 268:1995;1622-1624.
-
(1995)
Science
, vol.268
, pp. 1622-1624
-
-
Morse, D.1
-
26
-
-
0030096623
-
Rubisco in marine symbiotic dinoflagellates: Form II enzymes in eukaryotic oxygenic phototrophs encoded by a nuclear multigene family
-
Rowan R., et al. Rubisco in marine symbiotic dinoflagellates: Form II enzymes in eukaryotic oxygenic phototrophs encoded by a nuclear multigene family. Plant Cell. 8:1996;539-553.
-
(1996)
Plant Cell
, vol.8
, pp. 539-553
-
-
Rowan, R.1
-
27
-
-
0030832064
-
Structure and organization of the peridinin-chlorophyll a-binding protein gene in Gonyaulax polyedra
-
Le Q.H., et al. Structure and organization of the peridinin-chlorophyll a-binding protein gene in Gonyaulax polyedra. Mol. Gen. Genet. 255:1997;595-604.
-
(1997)
Mol. Gen. Genet.
, vol.255
, pp. 595-604
-
-
Le Q., H.1
-
28
-
-
0028920225
-
The light-harvesting chlorophyll a-c-binding protein of dinoflagellates: A putative polyprotein
-
Hiller R.G., et al. The light-harvesting chlorophyll a-c-binding protein of dinoflagellates: a putative polyprotein. FEBS Lett. 363:1995;175-178.
-
(1995)
FEBS Lett.
, vol.363
, pp. 175-178
-
-
Hiller, R.G.1
-
29
-
-
0041669431
-
Plastid ultrastructure defines the protein import pathway in dinoflagellates
-
Nassoury N., et al. Plastid ultrastructure defines the protein import pathway in dinoflagellates. J. Cell Sci. 116:2003;2867-2874.
-
(2003)
J. Cell Sci.
, vol.116
, pp. 2867-2874
-
-
Nassoury, N.1
-
30
-
-
0028844115
-
The structure and replication of kinetoplast DNA
-
Shapiro T.A., Englund P.T. The structure and replication of kinetoplast DNA. Annu. Rev. Microbiol. 49:1995;117-143.
-
(1995)
Annu. Rev. Microbiol.
, vol.49
, pp. 117-143
-
-
Shapiro, T.A.1
Englund, P.T.2
-
31
-
-
0025950264
-
Plasmids in diatom species
-
Hildebrand M., et al. Plasmids in diatom species. J. Bacteriol. 173:1991;5924-5927.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 5924-5927
-
-
Hildebrand, M.1
-
32
-
-
0026904647
-
Nucleotide sequence of diatom plasmids: Identification of open reading frames with similarity to site-specific recombinases
-
Hildebrand M., et al. Nucleotide sequence of diatom plasmids: identification of open reading frames with similarity to site-specific recombinases. Plant Mol. Biol. 19:1992;759-770.
-
(1992)
Plant Mol. Biol.
, vol.19
, pp. 759-770
-
-
Hildebrand, M.1
-
33
-
-
0033810559
-
Localization of plasmidlike DNA in giant-celled marine algae
-
La Claire J.W. II, Wang J. Localization of plasmidlike DNA in giant-celled marine algae. Protoplasma. 213:2000;157-164.
-
(2000)
Protoplasma
, vol.213
, pp. 157-164
-
-
La Claire II, J.W.1
Wang, J.2
-
34
-
-
0037417915
-
Unique mitochondrial genome architecture in unicellular relatives of animals
-
Burger G., et al. Unique mitochondrial genome architecture in unicellular relatives of animals. Proc. Natl. Acad. Sci. U. S. A. 100:2003;892-897.
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 892-897
-
-
Burger, G.1
-
35
-
-
0028087047
-
The plant mitochondrial genome: Physical structure, information content, RNA editing and gene migration to the nucleus
-
Schuster W., Brennicke A. The plant mitochondrial genome: physical structure, information content, RNA editing and gene migration to the nucleus. Annu. Rev. Plant Physiol. Plant Mol. Biol. 45:1994;61-78.
-
(1994)
Annu. Rev. Plant Physiol. Plant Mol. Biol.
, vol.45
, pp. 61-78
-
-
Schuster, W.1
Brennicke, A.2
-
36
-
-
0033605214
-
Mitochondrial genes are found on minicircle DNA molecules in the mesozoan animal Dicyema
-
Watanabe K.I., et al. Mitochondrial genes are found on minicircle DNA molecules in the mesozoan animal Dicyema. J. Mol. Biol. 286:1999;645-650.
-
(1999)
J. Mol. Biol.
, vol.286
, pp. 645-650
-
-
Watanabe, K.I.1
-
38
-
-
0034786985
-
Integrons: Natural tools for bacterial genome evolution
-
Rowe-Magnus D.A., Mazel D. Integrons: natural tools for bacterial genome evolution. Curr. Opin. Microbiol. 4:2001;565-569.
-
(2001)
Curr. Opin. Microbiol.
, vol.4
, pp. 565-569
-
-
Rowe-Magnus, D.A.1
Mazel, D.2
-
39
-
-
1242265736
-
Migration of the plasmid genome to the nucleus in a genome to the nucleus in a peridinin dinoflagellate
-
Hackett J.D., et al. Migration of the plasmid genome to the nucleus in a genome to the nucleus in a peridinin dinoflagellate. Curr. Biol. 14:2004;213-218.
-
(2004)
Curr. Biol.
, vol.14
, pp. 213-218
-
-
Hackett, J.D.1
-
40
-
-
0029933923
-
Free-radical-induced mutation vs redox regulation: Costs and benefits of genes in organelles
-
Allen J.F., Raven J.A. Free-radical-induced mutation vs redox regulation: costs and benefits of genes in organelles. J. Mol. Evol. 42:1996;482-492.
-
(1996)
J. Mol. Evol.
, vol.42
, pp. 482-492
-
-
Allen, J.F.1
Raven, J.A.2
-
41
-
-
50549201557
-
The relation of recombination to mutational advance
-
Muller H.J. The relation of recombination to mutational advance. Mutat. Res. 106:1964;2-9.
-
(1964)
Mutat. Res.
, vol.106
, pp. 2-9
-
-
Muller, H.J.1
-
42
-
-
0033953425
-
Organelle genes-do they jump or are they pushed?
-
Howe C.J., et al. Organelle genes-do they jump or are they pushed? Trends Genet. 16:2000;65-66.
-
(2000)
Trends Genet.
, vol.16
, pp. 65-66
-
-
Howe, C.J.1
-
43
-
-
0033580325
-
Photosynthetic control of chloroplast gene expression
-
Pfannschmidt T., et al. Photosynthetic control of chloroplast gene expression. Nature. 397:1999;625-628.
-
(1999)
Nature
, vol.397
, pp. 625-628
-
-
Pfannschmidt, T.1
-
44
-
-
0042307520
-
Gene transfer from organelles to the nucleus: Frequent and in big chunks
-
Martin W. Gene transfer from organelles to the nucleus: frequent and in big chunks. Proc. Natl. Acad. Sci. U. S. A. 100:2003;8612-8614.
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 8612-8614
-
-
Martin, W.1
-
45
-
-
0037010174
-
Translational regulations as specific traits of chloroplast gene expression
-
Choquet Y., Wollman F.-A. Translational regulations as specific traits of chloroplast gene expression. FEBS Lett. 529:2002;39-42.
-
(2002)
FEBS Lett.
, vol.529
, pp. 39-42
-
-
Choquet, Y.1
Wollman, F.-A.2
-
46
-
-
0034825471
-
A complex organization of the gene encoding cytochrome oxidase subunit 1 in the mitochondrial genome of the dinoflagellate, Crypthecodinium cohnii: Homologous recombination generates two different cox1 open reading frames
-
Norman J.E., Gray M.W. A complex organization of the gene encoding cytochrome oxidase subunit 1 in the mitochondrial genome of the dinoflagellate, Crypthecodinium cohnii: homologous recombination generates two different cox1 open reading frames. J. Mol. Evol. 53:2001;351-363.
-
(2001)
J. Mol. Evol.
, vol.53
, pp. 351-363
-
-
Norman, J.E.1
Gray, M.W.2
-
47
-
-
0036303481
-
Widespread and extensive editing of mitochondrial mRNAs in dinoflagellates
-
Lin S., et al. Widespread and extensive editing of mitochondrial mRNAs in dinoflagellates. J. Mol. Biol. 320:2002;727-739.
-
(2002)
J. Mol. Biol.
, vol.320
, pp. 727-739
-
-
Lin, S.1
-
48
-
-
0035998869
-
Polyadenylated transcripts containing random gene fragments are expressed in dinoflagellate mitochondria
-
Chaput H., et al. Polyadenylated transcripts containing random gene fragments are expressed in dinoflagellate mitochondria. Protist. 153:2002;111-122.
-
(2002)
Protist
, vol.153
, pp. 111-122
-
-
Chaput, H.1
-
49
-
-
0013423661
-
Phylogenetic identification of symbiotic dinoflagellates via length heteroplasmy in domain V of chloroplast large subunit (cp23S)-ribosomal DNA sequences
-
Santos S.R., et al. Phylogenetic identification of symbiotic dinoflagellates via length heteroplasmy in domain V of chloroplast large subunit (cp23S)-ribosomal DNA sequences. Mar. Biotechnol. 5:2003;130-140.
-
(2003)
Mar. Biotechnol.
, vol.5
, pp. 130-140
-
-
Santos, S.R.1
-
50
-
-
0037126071
-
Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus
-
Martin W., et al. Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Proc. Natl. Acad. Sci. U. S. A. 99:2002;12246-12251.
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 12246-12251
-
-
Martin, W.1
-
52
-
-
0034874061
-
Dinoflagellate nuclear SSU rRNA phylogeny suggests multiple plastid losses and replacements
-
Saldarriaga J.F., et al. Dinoflagellate nuclear SSU rRNA phylogeny suggests multiple plastid losses and replacements. J. Mol. Evol. 53:2001;204-213.
-
(2001)
J. Mol. Evol.
, vol.53
, pp. 204-213
-
-
Saldarriaga, J.F.1
-
53
-
-
0032852262
-
Molecular cloning and nucleotide sequence analysis of psbA from the dinoflagellates: Origin of the dinoflagellate plastid
-
Takishita K., Uchida A. Molecular cloning and nucleotide sequence analysis of psbA from the dinoflagellates: origin of the dinoflagellate plastid. Phycol. Res. 47:1999;207-216.
-
(1999)
Phycol. Res.
, vol.47
, pp. 207-216
-
-
Takishita, K.1
Uchida, A.2
-
54
-
-
0033624957
-
Phylogenetic analyses indicate that the 19(Hexanoyloxy-fucoxanthin- containing dinoflagellates have tertiary plastids of haptophyte origin
-
Tengs T., et al. Phylogenetic analyses indicate that the 19(Hexanoyloxy-fucoxanthin-containing dinoflagellates have tertiary plastids of haptophyte origin. Mol. Biol. Evol. 17:2000;718-729.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 718-729
-
-
Tengs, T.1
-
56
-
-
0034663668
-
Base J originally found in Kinetoplastida is also a minor constituent of nuclear DNA of Euglena gracilis
-
Dooijes D., et al. Base J originally found in Kinetoplastida is also a minor constituent of nuclear DNA of Euglena gracilis. Nucleic Acids Res. 28:2000;3017-3021.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 3017-3021
-
-
Dooijes, D.1
-
57
-
-
0001584709
-
Biochemistry of the dinoflagellate nucleus
-
F.J.R. Taylor. Blackwell
-
Rizzo P.J. Biochemistry of the dinoflagellate nucleus. Taylor F.J.R. The Biology of Dinoflagellates. 1987;143-173 Blackwell.
-
(1987)
The Biology of Dinoflagellates
, pp. 143-173
-
-
Rizzo, P.J.1
-
58
-
-
51249171246
-
Nuclear DNA content of some important plant species
-
Arumuganathan K., Earle E.D. Nuclear DNA content of some important plant species. Plant Mol. Biol. Rep. 9:1991;211-215.
-
(1991)
Plant Mol. Biol. Rep.
, vol.9
, pp. 211-215
-
-
Arumuganathan, K.1
Earle, E.D.2
-
59
-
-
0000844780
-
A simple chromosome spread technique for unarmored dinoflagellates and the impact of polyploidy in algal cultures
-
Loper C.L., et al. A simple chromosome spread technique for unarmored dinoflagellates and the impact of polyploidy in algal cultures. Trans. Am. Microsc. Soc. 99:1980;343-346.
-
(1980)
Trans. Am. Microsc. Soc.
, vol.99
, pp. 343-346
-
-
Loper, C.L.1
|