Free-radical-induced mutation vs redox regulation: Costs and benefits of genes in organelles

Journal of Molecular Evolution

Volumn 42, Issue 5, 1996, Pages 482-492

  Allen, John F ^a   Raven, John A ^b  

^a LUND UNIVERSITY   (Sweden)

^b UNIVERSITY OF DUNDEE   (United Kingdom)

Author keywords

Aging; Cell evolution; Chloroplasts; Cytoplasmic genomes; Endosymbiosis; Free radical mutagenesis; Gene transfer; Mitochondria; Mutation frequency; Nitrogen fixation; Redox regulation; Uniparental inheritance

Indexed keywords

FREE RADICAL; GENE PRODUCT; OXYGEN RADICAL;

AGING; CELL RESPIRATION; CHLOROPLAST; COST BENEFIT ANALYSIS; EVOLUTION; GENE EXPRESSION REGULATION; GENE MUTATION; GENE TRANSFER; MITOCHONDRION; MUTATION RATE; NITROGEN FIXATION; OXIDATION REDUCTION REACTION; PHOTOSYNTHESIS; PLASTID; PROTEIN SYNTHESIS; REVIEW; SYMBIOSIS;

AGING; CELL NUCLEUS; CHLOROPLASTS; DNA REPAIR; DNA, CHLOROPLAST; DNA, MITOCHONDRIAL; ELECTRON TRANSPORT; ENERGY METABOLISM; EUKARYOTIC CELLS; EVOLUTION, MOLECULAR; FREE RADICALS; MITOCHONDRIA; MUTATION; NITROGEN FIXATION; ORGANELLES; OXIDATION-REDUCTION; OXIDATIVE STRESS; PROKARYOTIC CELLS; REACTIVE OXYGEN SPECIES; RECOMBINATION, GENETIC; SYMBIOSIS;

EID: 0029933923     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02352278     Document Type: Review

References (76)

1. Allen JF (1975) A two-step mechanism for the photosynthetic reduction of oxygen by ferredoxin. Biochem Biophys Res Commun 66: 36-43
2. Allen JF (1992) Protein phosphorylation in regulation of photosynthesis. Biochim Biophys Acta 1098:275-335
3. Allen JF (1993a) Redox control of gene expression and the function of chloroplast genomes - an hypothesis. Photosynth Res 36:95-102
4. Allen JF (1993b) Control of gene expression by redox potential and the requirement for chloroplast and mitochondrial genomes. J Theor Biol 165:609-631
5. Allen JF (1993c) Redox control of transcription: sensors, responses, regulators, activators and repressors. FEBS Lett 332:203-207
6. Allen JF (1995) Thylakoid protein phosphorylation, state 1-state 2 transitions, and photosystem stoichiometry adjustment: redox control at multiple levels of gene expression. Physiol Plant 93:196-205
7. Allen JF (1996) Separate sexes and the mitochondrial theory of ageing. J Theor Biol (in press)
8. Allen JF, Alexciev K, Håkansson G (1995) Photosynthesis. Regulation by redox signalling. Curr Biol 5:869-872
9. Allen JF, Hall DO (1973) Superoxide reduction as a mechanism of ascorbate-stimulated oxygen uptake in isolated chloroplasts. Biochem Biophys Res Commun 52:856-862
10. Ames BN, Shigenaga MK, Hagen TM (1993) Oxidants, antioxidants, and the degenerative diseases of aging. Proc Natl Acad Sci USA 90:7915-7922
11. Attardi G, Schatz G (1988) Biogenesis of mitochondria. Annu Rev Cell Biol 4:289-333
12. Bell G (1988) Sex and death in Protozoa. The history of an obsession. Cambridge University Press, Cambridge
13. Bhattacharya D, Medlin L (1995) The phylogeny of plastids: a review based on comparisons of small-subunit ribosomal RNA coding regions. J Phycol 31:489-498
14. Bhaya D, Grossman A (1991) Targeting proteins to diatom plastids involves transport through an endoplasmic reticulum. Mol Gen Genet 229:400-404
15. Bowler C, van Montagu M, Inzé D (1992) Superoxide dismutase and stress tolerance. Annu Rev Plant Physiol Plant Mol Biol 43:83-116
16. Cavalier-Smith T (1987a) The simultaneous symbiotic origin of mitochondria, chloroplasts, and microbodies. Ann N Y Acad Sci 503: 55-71
17. Cavalier-Smith T (1987b) Eukaryotes with no mitochondria. Nature 326:332-333
18. Cavalier-Smith T (1993) Kingdom protozoa and its 18 phyla. Microbiol Rev 57:953-994
19. Cramer WA, Knaff DB (1990) Energy transduction in biological membranes. A Textbook of Bioenergetics. Springer Verlag, New York
20. Dawkins R (1976) The selfish gene. Oxford University Press, Oxford
21. Douglas AE (1994) Symbiotic interactions. Oxford Science, Oxford
22. Ellis RJ (1981) Chloroplast proteins: synthesis, transport and assembly. Annu Rev Plant Physiol 32:111-137
23. Ellis RJ (1984) The nuclear domination of chloroplast development. Sci Prog 69:129-142
24. Fleming JE, Miquel J, Cottrell SF, Yengoyan LS, Economos AC (1982) Is cell aging caused by respiration-dependent injury to the mitochondrial genome? Gerontol 28:44-53
25. Fork DC, Herbert SK (1993) Electron transport and photophosphorylation by photosystem 1 in vivo in plants and cyanobacteria. Photosynth Res 36:149-168
26. Fujiwara S, Iwahashi H, Sameya J, Nishikawa S (1993) Structure and co-transcription of the plastid-encoded rbcL and rbcS genes of Pleurochrysis carterae (Prymnesiophyceae). J Phycol 29:347-355
27. Gray MWA (1989) Origin and evolution of mitochondrial DNA. Annu Rev Cell Biol 5:25-50
28. Halliwell B, Gutteridge JMC (1989) Free radicals in biology and medicine. Clarendon, Oxford
29. Harman D (1972) The biologic clock: the mitochondria? J Am Geriatr Soc 20:145-147
30. Harris EH (1989) The Chlamydomonas source-book. Academic Press, San Diego
31. Hurst LD, Hamilton WD (1992) Cytoplasmic fusion and the nature of sexes. Proc R Soc Lond [Biol] 247:189-194
32. Hurst LD, Hoekstra RF (1994) Shellfish genes kept in line. Nature 368:811-812
33. Håkansson G, Allen JF (1995) Histidine and tyrosine phosphorylation in pea mitochondria: evidence for protein phosphorylation in respiratory redox signalling. FEBS Lett 372:238-242
34. Kanevski I, Maliga P (1994) Relocation of the plastid rbcL gene to the nucleus yields functional ribulose-1,5-bisphosphate carboxylase in tobacco chloroplasts. Proc Natl Acad Sci USA 91:1969-1973
35. Kersanach R, Brinkmann H, Liacid M-F, Zhang D-X, Martin W, Cerf R (1994) Five identical intron positions in ancient duplicated genes of eubacterial origin. Nature 367:387-389
36. Khakhina LN (1992) Concepts of symbiogenesis. In: Margulis L, McMenanim M (eds) Merkel S, Coalson R (transis) A historical and critical study of the research of Russian botanists. Yale University Press, New Haven
37. Konstantinov YM, Lutsenko GN, Podsosonny VA (1995) Genetic functions of isolated maize mitochondria under model changes of redox conditions. Biochem Mol Biol Intl 36:319-326
38. Kühlbrandt W, Wang DN, Fujiyoshi Y (1994) Atomic model of plant light-harvesting complex by electron crystallography. Nature 367: 614-621
39. Law R, Hutson V (1992) Intracellular symbionts and the evolution of uniparental cytoplasmic inheritance. Proc R Soc Lond [Biol] 248: 69-77
40. Law R, Lewis DH (1983) Biotic environments and the maintenance of sex - some evidence from mutualistic symbioses. Biol J Linn Soc 20:249-276
41. Loft S, Astrup A, Buemann B, Poulsen HE (1994) Oxidative DNA damage correlates with oxygen consumption in humans. FASEB J 8:534-537
42. Logan NA (1994) Bacterial systematics. Blackwell Scientific, Oxford
43. Margulis L (1981) Symbiosis in cell evolution. Life and its environment on the early earth. WH Freeman, San Francisco
44. Martin AP, Palumbi SR (1993) Body size, metabolic rate, generation time and the molecular clock. Proc Natl Acad Sci USA 90:4097-4091
45. Maynard Smith J, Szathmáry E (1995) The major transitions in evolution. WH Freeman, Oxford
46. Medlin LK, Lange M, Baumann MEM (1994) Genetic differentiation among three colony-forming species of Phaeocystis: further evidence for the phylogeny of the Prymnesiophyta. Phycologia 33: 199-212
47. McFadden GI, Gilson PR, Hill DRA (1994) Goniomonas: rRNA sequences indicate that this phagotrophic flagellate is a close relative of the host component of cryptomonads. Eur J Phycol 29:29-32
48. Miquel J, Economos AC, Fleming J, Johnson JE Jr (1980) Mitochondrial role in cell aging. Exp Gerontol 15:575-591
49. Mishra NP, Francke C, van Gorkom HJ, Ghanotakis DM (1994) Destructive role of singlet oxygen during aerobic illumination of the photosystem II core complex. Biochim Biophys Acta 1186:81-90
50. Moestrup O (1992) The algal classes. In: Watanabe MM (ed) Proceedings of the Symposium on Culture Collection of Algae. National Institute for Environmental Studies, Environmental Agency, Ibaraki, Japan pp 1-10
51. Morden CW, Delwiche CF, Kuhsel M, Palmer KD (1992) Gene phylogenies and the endosymbiotic origin of plastids. BioSystems 28: 75-90
52. Morse D, Salois P, Markovic P, Hastings JW (1995) A nuclear-encoded form II RuBisCo in dinoflagellates. Science 268:1622-1624
53. Mullet JE (1988) Chloroplast development and gene expression. Annu Rev Plant Physiol Plant Mol Biol 39:475-502
54. Münscher C, Müller-Höcker J, Kadenbach B (1993) Human aging is associated with various point mutations in tRNA genes of mitochondrial DNA. Biol Chem Hoppe-Seyler 374:1009-1104
55. Newton KJ (1988) Plant mitochondrial genomes: organization, expression and variation. Annu Rev Plant Physiol Plant Mol Biol 39:503-532
56. Ozawa T (1995) Mitochondrial DNA mutations associated with aging and degenerative diseases. Exp Gerontol 30:269-290
57. Palmer JD (1993) A genetic rainbow of plastids. Nature 364:762-763
58. Raven JA (1984) Energetics and transport in aquatic plants. AR Liss, New York
59. Raven JA (1987) Biochemistry, biophysics and physiology of chlorophyll b-containing algae: implications for taxonomy and phylogeny. Prog Phycol Res 5:1-122
60. Raven JA (1993) Energy and nutrient acquisition by autotrophs symbioses and their asymbiotic ancestors. Symbiosis 14:33-60
61. 3? J Phytoplankton Res 16:565-580
62. 2-evolving phototrophs. Biol Rev 69:61-94
63. 2 concentrations. Proc R Soc Edinb 1028:193-201
64. Reiser W (ed) (1992) Algae and symbioses: plant, animals, fungi, viruses, interactions explained. Biopress, Bristol
65. Reith M, Munholland J (1993) A high-resolution gene map of the chloroplast genome of the red alga Porphyra purpurea. Plant Cell 5:465-475
66. Round FE (1981) The ecology of algae. Cambridge University Press, Cambridge
67. Rutherford AW (1989) Photosystem II, the watersplitting enzyme. Trends Biochem Sci 14:227-232
68. Schuster W, Brennicke A (1994) The plant mitochondrial genome: physical structure, information content, RNA editing, and gene migration to the nucleus. Annu Rev Plant Physiol Plant Mol Biol 45:61-78
69. Shigenaga MK, Hagen TM, Ames BN (1994) Oxidative damage and mitochondrial decay in aging. Proc Natl Acad Sci USA 91:10771-10778
70. Skibinski DOF, Gallagher C, Beynon CM (1994) Mitochondrial DNA inheritance. Nature 368:817-818
71. Smith DC, Douglas AE (1987) The biology of symbioses. Edward Arnold, London
72. Sprent JI, Sprent P (1990) Nitrogen fixing organisms. Pure and applied aspects. Chapman and Hall, London
73. Stine M, Keathley DE (1990) Paternal inheritance of plastids in Engelmann Spruce x Blue Spruce hybrids. J Hered 81:443-446
74. von Heijne G (1986) Why mitochondria need a genome. FEBS Lett 188:1-4
75. Whitney SM, Shaw DC, Yellowlees D (1995) Evidence that the dinoflagellate ribulose-1,5-bisphosphate carboxylase/oxygenase is related to the form II large subunit of the photosynthetic non-sulphur bacteria. Proc Roy Soc Lond Biol 259:271-275
76. Zouros E, Ball AO, Saavedra C, Freeman KR (1994) Mitochondrial DNA inheritance. Nature 368:818