Structure and mechanism of tryptophylquinone enzymes

Bioorganic Chemistry

Volumn 33, Issue 3, 2005, Pages 159-170

  Davidson, Victor L ^a  

^a UNIVERSITY OF MISSISSIPPI MEDICAL CENTER   (United States)

Author keywords

Amine dehydrogenase; Hydrogen tunneling; Posttranslational modification; Protein derived cofactor; Quinoprotein; Redox protein

Indexed keywords

AMINE DEHYDROGENASE; ARALKYLAMINE DEHYDROGENASE; HYDROGEN; OXYGEN; QUINOHEMOPROTEIN AMINE DEHYDROGENASE; QUINONE DERIVATIVE; TRYPTOPHAN; UNCLASSIFIED DRUG;

BIOGENESIS; COVALENT BOND; CROSS LINKING; DEAMINATION; ELECTRON SPIN RESONANCE; ELECTRON TRANSPORT; ENZYME ACTIVE SITE; ENZYME ASSAY; ENZYME MECHANISM; ENZYME SPECIFICITY; METHYLOBACTERIUM EXTORQUENS; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; OXIDATION REDUCTION REACTION; PARACOCCUS DENITRIFICANS; PHYSICAL CHEMISTRY; PRIORITY JOURNAL; PROTEIN PROCESSING; REACTION ANALYSIS; SHORT SURVEY;

EID: 18844371727     PISSN: 00452068     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bioorg.2004.10.001     Document Type: Review

References (62)

1. N.M. Okeley, and W.A. van der Donk Chem. Biol. 7 2000 R159 R171
2. J.P. Klinman, and J.E. Dove Adv. Protein Chem. 58 2001
3. J. Stubbe, and W.A. van der Donk Chem. Rev. 98 1998 705 762
4. R.R. Eady, and P.J. Large Biochem. J. 106 1968 245 255
5. W.S. McIntire, D.E. Wemmer, A. Chistoserdov, and M.E. Lidstrom Science 252 1991 817 824
6. L.Y. Chen, F.S. Mathews, V.L. Davidson, E.G. Huizinga, F.M. Vellieux, J.A. Duine, and W.G. Hol FEBS Lett. 287 1991 163 166
7. S. Govindaraj, E. Eisenstein, L.H. Jones, J. Sanders-Loehr, A.Y. Chistoserdov, V.L. Davidson, and S.L. Edwards J. Bacteriol. 176 1994 2922 2929
8. A. Satoh, J.K. Kim, I. Miyahara, B. Devreese, I. Vandenberghe, A. Hacisalihoglu, T. Okajima, S. Kuroda, O. Adachi, J.A. Duine, J. Van Beeumen, K. Tanizawa, and K. Hirotsu J. Biol. Chem. 277 2002 2830 2834
9. S. Datta, Y. Mori, K. Takagi, K. Kawaguchi, Z.W. Chen, T. Okajima, S. Kuroda, T. Ikeda, K. Kano, K. Tanizawa, and F.S. Mathews Proc. Natl. Acad. Sci. USA 98 2001 14268 14273
10. V.L. Davidson Arch. Biochem. Biophys. 428 2004 32 40
11. V.L. Davidson Adv. Protein Chem. 58 2001 95 140
12. L. Chen, M. Doi, R.C. Durley, A.Y. Chistoserdov, M.E. Lidstrom, V.L. Davidson, and F.S. Mathews J. Mol. Biol. 276 1998 131 149
13. F.M. Vellieux, F. Huitema, H. Groendijk, K.H. Kalk, J.F. Jzn, J.A. Jongejan, J.A. Duine, K. Petratos, J. Drenth, and W.G. Hol EMBO J. 8 1989 2171 2178
14. G. Labesse, D. Ferrari, Z.W. Chen, G.L. Rossi, V. Kuusk, W.S. McIntire, and F.S. Mathews J. Biol. Chem. 273 1998 25703 25712
15. A.Y. Chistoserdov Microbiology 147 2001 2195 2202
16. V.L. Davidson, H.B. Brooks, M.E. Graichen, L.H. Jones, and Y.L. Hyun Methods Enzymol. 258 1995 176 190
17. K. Warncke, H.B. Brooks, H.-I. Lee, J.L. McCracken, V.L. Davidson, and G.T. Babcock J. Am. Chem. Soc. 117 1995 10063 10075
18. V. Singh, Z. Zhu, V.L. Davidson, and J.L. McCracken J. Am. Chem. Soc. 122 2000 931 938
19. Z. Zhu, and V.L. Davidson J. Biol. Chem. 273 1998 14254 14260
20. H.B. Brooks, and V.L. Davidson J. Am. Chem. Soc. 116 1994 11202 11202
21. N. Fujieda, M. Mori, K. Kano, and T. Ikeda Biochemistry 41 2002 13736 13743
22. H.B. Brooks, L.H. Jones, and V.L. Davidson Biochemistry 32 1993 2725 2729
23. C. Alhambra, M.L. Sanchez, J. Corchado, J. Gao, and D.G. Truhlar Chem. Phys. Lett. 347 2001 512 518
24. D.G. Truhlar, J. Gao, C. Alhambra, M. Garcia-Viloca, J. Corchado, M.L. Sanchez, and J. Villa Acc. Chem. Res. 35 2002 341 349
25. Y.L. Hyun, and V.L. Davidson Biochim. Biophys. Acta 1251 1995 198 200
26. J. Basran, S. Patel, M.J. Sutcliffe, and N.S. Scrutton J. Biol. Chem. 276 2001 6234 6242
27. L. Masgrau, J. Basran, P. Hothi, M.J. Sutcliffe, and N.S. Scrutton Arch. Biochem. Biophys. 428 2004 41 51
28. G.R. Bishop, E.J. Valente, T.L. Whitehead, K.L. Brown, R.T. Hicks, and V.L. Davidson J. Am. Chem. Soc. 118 1996 12868 12869
29. V.L. Davidson, M.E. Graichen, and L.H. Jones Biochem. J. 308 Pt. 2 1995 487 492
30. G.R. Bishop, Z. Zhu, T.L. Whitehead, R.P. Hicks, and V.L. Davidson Biochem. J. 330 Pt. 3 1998 1159 1163
31. Z. Zhu, and V.L. Davidson Biochemistry 38 1999 4862 4867
32. D. Sun, K. Ono, T. Okajima, K. Tanizawa, M. Uchida, Y. Yamamoto, F.S. Mathews, and V.L. Davidson Biochemistry 42 2003 10896 10903
33. D. Sun, L.H. Jones, F.S. Mathews, and V.L. Davidson Protein Eng. 14 2001 675 681
34. A. Satoh, I. Adachi, K. Tanazawa, and K. Hirutsu Biochim. Biophys. Acta 1647 2003 272 277
35. Z. Zhu, D. Sun, and V.L. Davidson Biochemistry 39 2000 11184 11186
36. Y. Wang, D. Sun, and V.L. Davidson J. Biol. Chem. 277 2002 4119 4122
37. J.J. Onuffer, and J.F. Kirsch Protein Sci. 4 1995 1750 1757
38. S. Oue, A. Okamoto, T. Yano, and H. Kagamiyama J. Biol. Chem. 274 1999 2344 2349
39. L. Hedstrom, L. Szilagyi, and W.J. Rutter Science 255 1992 1249 1253
40. H.B. Brooks, and V.L. Davidson Biochemistry 33 1994 5696 5701
41. Y.L. Hyun, Z. Zhu, and V.L. Davidson J. Biol. Chem. 274 1999 29081 29086
42. L. Chen, R.C. Durley, F.S. Mathews, and V.L. Davidson Science 264 1994 86 90
43. V.L. Davidson, and L.H. Jones Biochemistry 35 1996 8120 8125
44. V.L. Davidson, L.H. Jones, and Z. Zhu Biochemistry 37 1998 7371 7377
45. D. Sun, Z.W. Chen, F.S. Mathews, and V.L. Davidson Biochemistry 41 2002 13926 13933
46. V.L. Davidson Biochemistry 35 1996 14035 14039
47. G.R. Bishop, and V.L. Davidson Biochemistry 36 1997 13586 13592
48. V.L. Davidson, and D. Sun J. Am. Chem. Soc. 125 2003 3224 3225
49. V.L. Davidson Acc. Chem. Res. 33 2000 87 93
50. V.L. Davidson Biochemistry 41 2002 14633 14636
51. D. Cai, and J.P. Klinman J. Biol. Chem. 269 1994 32039 32042
52. R. Matsuzaki, T. Fukui, H. Sato, Y. Ozaki, and K. Tanizawa FEBS Lett. 351 1994 360 364
53. M. Mure Acc. Chem. Res. 37 2004 131 139
54. C.J. van der Palen, D.J. Slotboom, L. Jongejan, W.N. Reijnders, N. Harms, J.A. Duine, and R.J. van Spanning Eur. J. Biochem. 230 1995 860 871
55. C.J. van der Palen, W.N. Reijnders, S. de Vries, J.A. Duine, and R.J. van Spanning Antonie Van Leeuwenhoek 72 1997 219 228
56. Y. Wang, M.E. Graichen, A. Liu, A.R. Pearson, C.W. Wilmot, and V.L. Davidson Biochemistry 42 2003 7318 7325
57. A.R. Pearson, T. de la Mora-Rey, M.E. Graichen, Y. Wang, L.H. Jones, S. Marimanikkupam, S.A. Aggar, P.A. Grimsrud, V.L. Davidson, and C.W. Wilmot Biochemistry 43 2004 5494 5502
58. A.R. Pearson, L.H. Jones, L. Higgins, A.E. Ashcroft, C.W. Wilmot, and V.L. Davidson Biochemistry 42 2003 3224 3230
59. M. Husain, and V.L. Davidson J. Biol. Chem. 260 1985 14626 14629
60. Y.L. Hyun, and V.L. Davidson Biochemistry 34 1995 12249 12254
61. K. Takagi, K. Yamamoto, K. Kano, and T. Ikeda Eur. J. Biochem. 268 2001 470 476
62. O. Adachi, T. Kubota, A. Hacisalihoglu, H. Toyama, E. Shinagawa, J.A. Duine, and K. Matsushita Biosci. Biotechnol. Biochem. 62 1998 469 478