Proteomic analysis of reaper 5′ untranslated region-interacting factors isolated by tobramycin affinity-selection reveals a role for La antigen in reaper mRNA translation

Proteomics

Volumn 5, Issue 6, 2005, Pages 1645-1655

  Vazquez Pianzola, Paula ^a   Urlaub, Henning ^a   Rivera Pomar, Rolando ^a,b,c  

^a MAX PLANCK INSTITUTE FOR BIOPHYSICAL CHEMISTRY   (Germany)

^b UNIVERSIDAD NACIONAL DE LA PLATA   (Argentina)

^c Ctro Reg de Estud Genomicos   (Argentina)

Author keywords

5 untranslated region; Cap independent initiation; Reaper; Tobramycin aptamer tagged RNA; Translational control

Indexed keywords

AMINOPEPTIDASE; APTAMER; DIPEPTIDASE; ENOLASE; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; LA ANTIGEN; MESSENGER RNA; PROTEIN P40; RECOMBINANT PROTEIN; RIBONUCLEOPROTEIN; RIBOSOME PROTEIN; THIOREDOXIN REDUCTASE; TOBRAMYCIN;

5' UNTRANSLATED REGION; ANALYTIC METHOD; APOPTOSIS; ARTICLE; CROSS LINKING; DRUG ISOLATION; GENE EXPRESSION REGULATION; MASS SPECTROMETRY; MOLECULAR RECOGNITION; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN ASSEMBLY; PROTEIN BINDING; PROTEIN PROTEIN INTERACTION; PROTEIN PURIFICATION; PROTEIN RNA BINDING; PROTEOMICS; RNA INTERFERENCE; RNA TRANSLATION; TRANSLATION REGULATION;

5' UNTRANSLATED REGIONS; ANIMALS; AUTOANTIGENS; DROSOPHILA MELANOGASTER; DROSOPHILA PROTEINS; EMBRYO, NONMAMMALIAN; GENES, REPORTER; MASS SPECTROMETRY; PROTEIN BIOSYNTHESIS; PROTEOMICS; RECOMBINANT PROTEINS; RIBONUCLEOPROTEINS; RNA INTERFERENCE; RNA, MESSENGER; TISSUE EXTRACTS; TOBRAMYCIN;

EID: 17844382455     PISSN: 16159853     EISSN: None     Source Type: Journal    
DOI: 10.1002/pmic.200401045     Document Type: Article

References (48)

1. Abrams, J. M., White, K., Fessler, L. I., Steller, H., Development 1993, 117, 29-43.
2. Abrams, J. M., Trends Cell Biol. 1999, 9, 435-440.
3. Holcik, M., Sonanberg, N., Korneluk, R. G., Trends Genet. 2000, 16, 469-473.
4. Clemens, M. J., Bushell, M., Jeffrey, I. W., Pain, V. M. et al., Cell Death Differ. 2000, 7, 603-615.
5. Holley, C. L., Olson, M. R., Colon-Ramos, D. A., Kornbluth, S., Nat. Cell Biol. 2002, 4, 439-444.
6. Yoo, S. J., Huh, J. R., Muro, I., Yu, H. et al., Nat. Cell Biol. 2002, 4, 416-424.
7. Hernándaz, G., Vazquez-Pianzola, P., Sierra, J. M., Rivera-Pomar, R., RNA 2004, 10, 1783-1791.
8. Hartmuth, K., Urlaub, H., Vornlocher, H. P., Will, C. L. et al., Proc. Natl. Acad. Sci. USA 2002, 99, 16719-16724.
9. Gebauer, F., Corona, D. F. V., Preiss, T., Becker, P. B. et al., EMBO J. 1999, 18, 6146-6154.
10. Tuschl, T., Zamore, P. D., Lehmann, R., Bartel, D. P. et al., Genes Dev. 1999, 13, 3191-3197.
11. Hartmuth, K., Vornlocher, H. P., Luhrmann, R., Methods Mol. Biol. 2004, 257, 47-64.
12. Yoo, C. J., Wolin, S. L., Mol. Cell. Biol. 1994, 14, 6412-5424.
13. Hernández, G., Vazquez-Pianzola, P., Zurbriggen, A., Altmann, M. et al., Eur. J. Biochem. 2004, 271, 2923-2936.
14. Maroto, F. G., Sierra, J. M., Mol. Cell. Biol. 1989, 9, 2181-2190.
15. Rivera-Pomar, R., Niessing, D., Schmidt-Ott, U., Gehring, W. J. et al., Nature 1996, 379, 746-749.
16. Wolin, S. L., Cedervall, T., Annu. Rev. Biochem. 2002, 71, 376-403.
17. Ali, N., Siddiqui, A., Proc. Natl. Acad. Sci. USA 1997, 94, 2249-2254.
18. Ali, N., Pruijn, G. J., Kenan, D. J., Keene, J. D. et al., J. Biol. Chem. 2000, 275, 27531-27540.
19. Meerovitch, K., Svitkin, Y. V., Lee, H. S., Lejbkowicz, F. et al., J. Virol. 1993, 67, 3798-3807.
20. Kim, Y. K., Jang, S. K., J. Gen. Virol. 1999, 80, 3159-3166.
21. Ray, P. S., Das, S., Nucleic Acids Res. 2002, 30, 4500-4608.
22. Holcik, M., Korneluk, R. G., Mol. Cell. Biol. 2000, 20, 4648-4657.
23. Kim, Y. K., Back, S. H., Rho, J., Lee, S. H. et al., Nucleic Acids Res. 2001, 29, 5009-5016.
24. Cardinali, B., Carissimi, C., Gravina, P., Pierandrai-Amaldi, P., J. Biol. Chem. 2003, 278, 3514S-35151.
25. Crosio, C., Boyl, P. P., Loreni, F., Pierandrei-Amaldi, P. et al., Nucleic Acids Res. 2000, 28, 2927-2934.
26. Sirover, M. A., Biochim. Biophys. Acta 1999, 1432, 159-184.
27. Schultz, D. E., Hardin, C. C., Lemon, S. M., J. Biol. Chem. 1996, 271, 14134-14142.
28. Yi, M., Schultz, D. E., Lemon, S. M., J. Virol. 2000, 74, 6459-6468.
29. De, B. P., Gupta, S., Zhao, H., Drazba, J. A. et al., J. Biol. Chem. 1996, 271, 24728-24735.
30. Petrik, J., Parker, H., Alexander, G. J., J. Gen. Virol. 1999, 80, 3109-3113.
31. Zang, W. Q., Fieno, A. M., Grant, R. A., Yen, T. S., Virology 1998, 248, 46-52.
32. Ma, X., Karra, S., Guo, W., Lindner, D. J. et al., J. Biol. Chem. 2001, 276, 24843-24854.
33. Mansfield, J. H., Wilhelm, J. E., Hazelrigg, T., Development 2002, 129, 197-209.
34. Amero, S. A., Matunis, M. J., Matunis, E. L., Hockensmith, J. W. et al., Mol. Cell. Biol. 1993, 13, 5323-5330.
35. Hamann, S., Stratling, W. H., Nucleic Acids Res. 1998, 26, 4108-4115.
36. Santamaria, P., Randsholt, N. B., Mol. Gen. Genet. 1995, 246, 282-290.
37. Giot, L., Bader, J. S., Brouwer, C., Chaudhuri, A. et al., Science 2003, 302, 1727-1736.
38. Johnstone, O., Lasko, P., Annu. Rev. Genet. 2001, 35, 365-406.
39. Melnick, M. B., Noll, E., Perrimon, N., Genetics 1993, 135, 553-564.
40. Török, I., Herrmann-Horle, D., Kiss, I., Tick, G. et al., Mol. Cell. Biol. 1999, 19, 2308-2321.
41. Demianova, M., Formosa, T. G., Ellis, S. R., J. Biol. Chem. 1996, 271, 11383-11391.
42. Labourier, E., Rio, D. C., RNA 2001, 7, 457-470.
43. Zhang, A., Wassarman, K. M., Ortega, J., Steven, A. C. et al., Mol. Cell. 2002, 9, 11-22.
44. Sanford, J. R., Gray, N. K., Beckmann, K., Caceres, J. F., Genes Dev. 2004, 18, 755-768.
45. Cartegni, L., Wang, J., Zhu, Z., Zhang, M. Q. et al., Nucleic Acids Res. 2003, 31, 3568-3571.
46. Hart, K., Bienz, M., Development 1996, 122, 747-751.
47. Bai, C., Tolias, P. P., Nucleic Acids Res. 2000, 28, 1078-1084.
48. Bock-Taferner, P., Wank, H., Biol. Chem. 2004, 385, 615-621.