메뉴 건너뛰기




Volumn 110, Issue 1-2, 2005, Pages 143-150

Nucleotide sequence analysis of Plum pox virus isolate W3174: Evidence of a new strain

Author keywords

Genome sequence; Phylogenetic analysis; Plum pox virus; Strain typing; Strain W

Indexed keywords

AMINO ACID; COAT PROTEIN; POLYPROTEIN;

EID: 17444379397     PISSN: 01681702     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.virusres.2005.02.004     Document Type: Article
Times cited : (63)

References (35)
  • 3
    • 0026582219 scopus 로고
    • Characterization of the potyviral HC-Pro autoproteolytic cleavage site
    • J.C. Carrington, and K.L. Herndon Characterization of the potyviral HC-Pro autoproteolytic cleavage site Virology 187 1992 308 315
    • (1992) Virology , vol.187 , pp. 308-315
    • Carrington, J.C.1    Herndon, K.L.2
  • 4
    • 0027470148 scopus 로고
    • 3′-Terminal sequence of the Plum pox virus PS and 46 isolates: Evidence for RNA recombination within the potyvirus group
    • M.T. Cervera, J.L. Riechmann, M.T. Martin, and J.A. Garcia 3′-Terminal sequence of the Plum pox virus PS and 46 isolates: evidence for RNA recombination within the potyvirus group J. Gen. Virol. 74 1993 329 334
    • (1993) J. Gen. Virol. , vol.74 , pp. 329-334
    • Cervera, M.T.1    Riechmann, J.L.2    Martin, M.T.3    Garcia, J.A.4
  • 5
    • 0031443134 scopus 로고    scopus 로고
    • Production of strain specific antibodies against a synthetic polypeptide corresponding to the N-terminal region of the plum pox potyvirus coat protein
    • A. Crescenzi, L. d'Aquino, M. Nuzzaci, A. Ostuni, A. Bavoso, S. Comes, A. De Stradis, and P. Piazzola Production of strain specific antibodies against a synthetic polypeptide corresponding to the N-terminal region of the plum pox potyvirus coat protein J. Virol. Methods 69 1997 181 189
    • (1997) J. Virol. Methods , vol.69 , pp. 181-189
    • Crescenzi, A.1    D'Aquino, L.2    Nuzzaci, M.3    Ostuni, A.4    Bavoso, A.5    Comes, S.6    De Stradis, A.7    Piazzola, P.8
  • 6
    • 0032695133 scopus 로고    scopus 로고
    • Functions of the 3′-untranslated regions of positive strand RNA viral genomes
    • T.W. Dreher Functions of the 3′-untranslated regions of positive strand RNA viral genomes Annu. Rev. Phytopathol. 37 1999 151 174
    • (1999) Annu. Rev. Phytopathol. , vol.37 , pp. 151-174
    • Dreher, T.W.1
  • 7
    • 0344736768 scopus 로고    scopus 로고
    • The complete nucleotide sequence of Plum pox virus isolates from sweet (PPV-SwC) and sour (PPV-SoC) cherry and their taxonomic relationships within the species
    • A. Fanigliulo, S. Comes, E. Maiss, P. Piazzolla, and A. Crescenzi The complete nucleotide sequence of Plum pox virus isolates from sweet (PPV-SwC) and sour (PPV-SoC) cherry and their taxonomic relationships within the species Arch. Virol. 148 2003 2137 2153
    • (2003) Arch. Virol. , vol.148 , pp. 2137-2153
    • Fanigliulo, A.1    Comes, S.2    Maiss, E.3    Piazzolla, P.4    Crescenzi, A.5
  • 8
    • 0024748253 scopus 로고
    • The use of the 3′ non-coding nucleotide sequences in the taxonomy of potyviruses: Application to watermelon mosaic virus 2 and soybean mosaic virus-N
    • M.J. Frenkel, C.W. Ward, and D.D. Shukla The use of the 3′ non-coding nucleotide sequences in the taxonomy of potyviruses: application to watermelon mosaic virus 2 and soybean mosaic virus-N J. Gen. Virol. 70 1989 2775 2783
    • (1989) J. Gen. Virol. , vol.70 , pp. 2775-2783
    • Frenkel, M.J.1    Ward, C.W.2    Shukla, D.D.3
  • 10
    • 4544383420 scopus 로고    scopus 로고
    • Geographically and temporally distant natural recombinant isolates of Plum pox virus (PPV) are genetically similar and form a unique PPV subgroup
    • M. Glasa, L. Plakovics, P. Komínek, G. Labonne, S. Pittnerová, O. Kúdela, T. Candresse, and Z. Šubr Geographically and temporally distant natural recombinant isolates of Plum pox virus (PPV) are genetically similar and form a unique PPV subgroup J. Gen. Virol. 85 2004 2671 2681
    • (2004) J. Gen. Virol. , vol.85 , pp. 2671-2681
    • Glasa, M.1    Plakovics, L.2    Komínek, P.3    Labonne, G.4    Pittnerová, S.5    Kúdela, O.6    Candresse, T.7    Šubr, Z.8
  • 11
    • 0027033810 scopus 로고
    • Potyvirus serology, sequences and biology
    • Barnett O.W. (Ed.), Potyvirus Taxonomy. Springer-Verlag, Wien
    • Hammond, J., 1992. Potyvirus serology, sequences and biology. In: Barnett O.W. (Ed.), Potyvirus Taxonomy. Springer-Verlag, Wien, pp. 123-138. Arch. Virol. (Suppl.) 5.
    • (1992) Arch. Virol. (Suppl.) , vol.5 , pp. 123-138
    • Hammond, J.1
  • 12
    • 0035150717 scopus 로고    scopus 로고
    • Molecular evidence of the relationship between a virus associated with flat apple disease and Cherry rasp leaf virus as determined by RT-PCR
    • D. James, W.E. Howell, and G.I. Mink Molecular evidence of the relationship between a virus associated with flat apple disease and Cherry rasp leaf virus as determined by RT-PCR Plant Dis. 85 2001 47 52
    • (2001) Plant Dis. , vol.85 , pp. 47-52
    • James, D.1    Howell, W.E.2    Mink, G.I.3
  • 13
    • 0041305234 scopus 로고    scopus 로고
    • Molecular characterization and comparison of the 3′-terminal region of two Canadian isolates of Plum pox virus
    • D. James, and C. Upton Molecular characterization and comparison of the 3′-terminal region of two Canadian isolates of Plum pox virus Phytopathology 91 2001 S43 (Abstract)
    • (2001) Phytopathology , vol.91 , pp. 43
    • James, D.1    Upton, C.2
  • 14
    • 0043241637 scopus 로고    scopus 로고
    • Detection of a new and unusual isolate of Plum pox potyvirus in plum (Prunus domestica)
    • D. James, A. Varga, D. Thompson, and S. Hayes Detection of a new and unusual isolate of Plum pox potyvirus in plum (Prunus domestica) Plant Dis. 87 2003 1119 1124
    • (2003) Plant Dis. , vol.87 , pp. 1119-1124
    • James, D.1    Varga, A.2    Thompson, D.3    Hayes, S.4
  • 15
    • 0024677913 scopus 로고
    • The complete nucleotide sequence of plum pox potyvirus RNA
    • S. Lain, J.L. Riechmann, and J.A. Garcia The complete nucleotide sequence of plum pox potyvirus RNA Virus Res. 13 1989 157 172
    • (1989) Virus Res. , vol.13 , pp. 157-172
    • Lain, S.1    Riechmann, J.L.2    Garcia, J.A.3
  • 18
    • 0000230881 scopus 로고
    • Isolation and analysis of double-stranded RNA from virus infected plants and fungal tissue
    • T.J. Morris, and J.A. Dodds Isolation and analysis of double-stranded RNA from virus infected plants and fungal tissue Phytopathology 69 1979 854 858
    • (1979) Phytopathology , vol.69 , pp. 854-858
    • Morris, T.J.1    Dodds, J.A.2
  • 20
    • 0003271217 scopus 로고    scopus 로고
    • Present status of the new cherry subgroup of Plum pox virus (PPV-C)
    • R.K. Hadidi H. Khetarpal Koganezawa APS Press St. Paul, MN
    • L. Nemchinov, A. Crescenzi, A. Hadidi, P. Piazzolla, and T. Verderevskaya Present status of the new cherry subgroup of Plum pox virus (PPV-C) R.K. Hadidi H. Khetarpal Koganezawa Plant Virus Disease Control 1998 APS Press St. Paul, MN 629 638
    • (1998) Plant Virus Disease Control , pp. 629-638
    • Nemchinov, L.1    Crescenzi, A.2    Hadidi, A.3    Piazzolla, P.4    Verderevskaya, T.5
  • 21
    • 0029802736 scopus 로고    scopus 로고
    • Sour cherry strain of plum pox potyvirus (PPV): Molecular and serological evidence for a new subgroup of PPV strains
    • L. Nemchinov, A. Hadidi, E. Maiss, M. Cambra, T. Candresse, and V. Damsteegt Sour cherry strain of plum pox potyvirus (PPV): Molecular and serological evidence for a new subgroup of PPV strains Phytopathology 86 1996 1215 1221
    • (1996) Phytopathology , vol.86 , pp. 1215-1221
    • Nemchinov, L.1    Hadidi, A.2    Maiss, E.3    Cambra, M.4    Candresse, T.5    Damsteegt, V.6
  • 22
    • 0026460397 scopus 로고
    • The complete nucleotide sequence of turnip mosaic potyvirus RNA
    • O. Nicholas, and J.-F. Laliberté The complete nucleotide sequence of turnip mosaic potyvirus RNA J. Gen. Virol. 73 1992 2785 2793
    • (1992) J. Gen. Virol. , vol.73 , pp. 2785-2793
    • Nicholas, O.1    Laliberté, J.-F.2
  • 23
    • 0030203863 scopus 로고    scopus 로고
    • TREEVIEW: An application to display phylogenetic trees on personal computers
    • R.D.M. Page TREEVIEW: An application to display phylogenetic trees on personal computers Comput. Appl. Biosci. 12 1996 357 358
    • (1996) Comput. Appl. Biosci. , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 24
    • 0031925390 scopus 로고    scopus 로고
    • Mutations in the HC-Pro gene of zucchini yellow mosaic potyvirus: Effects on aphid transmission and binding to purified virions
    • Y. Peng, D. Kadoury, A. Gal-On, H. Huet, Y. Wang, and B. Racch Mutations in the HC-Pro gene of zucchini yellow mosaic potyvirus: effects on aphid transmission and binding to purified virions J. Gen. Virol. 79 1998 897 904
    • (1998) J. Gen. Virol. , vol.79 , pp. 897-904
    • Peng, Y.1    Kadoury, D.2    Gal-On, A.3    Huet, H.4    Wang, Y.5    Racch, B.6
  • 25
    • 0029853148 scopus 로고    scopus 로고
    • WWW-Query: An on-line retrieval system for biological sequence banks
    • G. Perrière, and M. Gouy WWW-Query: an on-line retrieval system for biological sequence banks Biochimie 78 1996 364 369
    • (1996) Biochimie , vol.78 , pp. 364-369
    • Perrière, G.1    Gouy, M.2
  • 26
    • 0027017067 scopus 로고
    • Coat protein phylogeny and systematics of potyviruses
    • Barnett O. W. (Ed.), Potyvirus Taxonomy. Springer-Verlag, Wien
    • Rybicki, E.P., Shukla, D.D., 1992. Coat protein phylogeny and systematics of potyviruses. In: Barnett O. W. (Ed.), Potyvirus Taxonomy. Springer-Verlag, Wien, pp. 139-170. Arch. Virol. (Suppl.) 5.
    • (1992) Arch. Virol. (Suppl.) , vol.5 , pp. 139-170
    • Rybicki, E.P.1    Shukla, D.D.2
  • 27
    • 0023375195 scopus 로고
    • The neighbour-joining method: A new method for reconstructing phylogenetic trees
    • N. Saitou, and M. Nei The neighbour-joining method: a new method for reconstructing phylogenetic trees Mol. Biol. E.4 1987 406 425
    • (1987) Mol. Biol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 28
    • 0030748535 scopus 로고    scopus 로고
    • Long sequences in the 5′-noncoding region of Plum pox virus are not necessary for viral infectivity but contribute to viral competitiveness and pathogenesis
    • L. Simón-Buela, H.S. Guo, and G.A. Garcia Long sequences in the 5′-noncoding region of Plum pox virus are not necessary for viral infectivity but contribute to viral competitiveness and pathogenesis Virology 233 1997 157 162
    • (1997) Virology , vol.233 , pp. 157-162
    • Simón-Buela, L.1    Guo, H.S.2    Garcia, G.A.3
  • 31
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • J.D. Thompson, T.J. Gibson, F. Plewniak, F. Jeanmougin, and D.G. Higgins The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res. 24 1997 4876 4882
    • (1997) Nucleic Acids Res. , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 33
    • 0025878905 scopus 로고
    • A polymerase chain reaction assay adapted to plum pox potyvirus detection
    • T. Wetzel, T. Candresse, M. Ravelonandro, and J. Dunez A polymerase chain reaction assay adapted to plum pox potyvirus detection J. Virol. Methods 33 1991 355 365
    • (1991) J. Virol. Methods , vol.33 , pp. 355-365
    • Wetzel, T.1    Candresse, T.2    Ravelonandro, M.3    Dunez, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.