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Volumn 43, Issue 4, 2005, Pages 1515-1521

Identification of clinically relevant viridans streptococci by an oligonucleotide array

Author keywords

[No Author keywords available]

Indexed keywords

DIGOXIGENIN; ETHYLHYDROCUPREINE; NYLON; PRIMER DNA; RIBOSOME RNA; SPACER DNA;

EID: 16844374904     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.43.4.1515-1521.2005     Document Type: Article
Times cited : (34)

References (39)
  • 1
    • 0242573148 scopus 로고    scopus 로고
    • The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function
    • Adamczyk, J., M. Hesselsoe, N. Iversen, M. Horn, A. Lehner, P. H. Nielsen, M. Schloter, P. Roslev, and M. Wagner. 2003. The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function. Appl. Environ. Microbiol. 69:6875-6887.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 6875-6887
    • Adamczyk, J.1    Hesselsoe, M.2    Iversen, N.3    Horn, M.4    Lehner, A.5    Nielsen, P.H.6    Schloter, M.7    Roslev, P.8    Wagner, M.9
  • 2
    • 0029024809 scopus 로고
    • Species identification of members of the Streptococcus milleri group isolated from the vagina by ID 32 Strep system and differential phenotypic characteristics
    • Ahmet, Z., M. Warren, and E. T. Houang. 1995. Species identification of members of the Streptococcus milleri group isolated from the vagina by ID 32 Strep system and differential phenotypic characteristics. J. Clin. Microbiol. 33:1592-1595.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 1592-1595
    • Ahmet, Z.1    Warren, M.2    Houang, E.T.3
  • 3
    • 0033952657 scopus 로고    scopus 로고
    • Rapid diagnosis of bacteremia by universal amplification of 23S ribosomal DNA followed by hybridization to an oligonucleotide array
    • Anthony, R. M., T. J. Brown, and G. L. French. 2000. Rapid diagnosis of bacteremia by universal amplification of 23S ribosomal DNA followed by hybridization to an oligonucleotide array. J. Clin. Microbiol. 38:781-788.
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 781-788
    • Anthony, R.M.1    Brown, T.J.2    French, G.L.3
  • 4
    • 0026207421 scopus 로고
    • The 16S/23S ribosomal spacer region as a target for DNA probes to identify eubacteria
    • Barry, T., G. Colleran, M. Glennon, L. K. Dunican, and F. Gannon. 1991. The 16S/23S ribosomal spacer region as a target for DNA probes to identify eubacteria. PCR Methods Appl. 1:51-56.
    • (1991) PCR Methods Appl. , vol.1 , pp. 51-56
    • Barry, T.1    Colleran, G.2    Glennon, M.3    Dunican, L.K.4    Gannon, F.5
  • 5
    • 0026327769 scopus 로고
    • A scheme for the identification of viridans streptococci
    • Beighton, D., J. M. Hardie, and A. Whiley. 1991. A scheme for the identification of viridans streptococci. J. Med. Microbiol. 35:367-372.
    • (1991) J. Med. Microbiol. , vol.35 , pp. 367-372
    • Beighton, D.1    Hardie, J.M.2    Whiley, A.3
  • 6
    • 0025998182 scopus 로고
    • Intrageneric structure of Streptococcus based on comparative analysis of small-subunit rRNA sequences
    • Bentley, R. W., J. A. Leigh, and M. D. Collins. 1991. Intrageneric structure of Streptococcus based on comparative analysis of small-subunit rRNA sequences. Int. J. Syst. Bacteriol. 41:487-494.
    • (1991) Int. J. Syst. Bacteriol. , vol.41 , pp. 487-494
    • Bentley, R.W.1    Leigh, J.A.2    Collins, M.D.3
  • 8
    • 2942564248 scopus 로고    scopus 로고
    • Identification of clinically relevant viridans streptococci by sequence analysis of the 16S-23S rDNA spacer region
    • Chen, C. C., L. J. Teng, and T. C. Chang. 2004. Identification of clinically relevant viridans streptococci by sequence analysis of the 16S-23S rDNA spacer region. J. Clin. Microbiol. 42:2651-2657.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 2651-2657
    • Chen, C.C.1    Teng, L.J.2    Chang, T.C.3
  • 9
    • 0035056321 scopus 로고    scopus 로고
    • 16S ribosomal DNA sequence analysis distinguishes biotypes of Streptococcus bovis: Streptococcus bovis biotype II/2 is a separate genospecies and the predominant clinical isolate in adult males
    • Clarridge, J. E., III, S. M. Attorri, Q. Zhang, and J. Bartell. 2001. 16S ribosomal DNA sequence analysis distinguishes biotypes of Streptococcus bovis: Streptococcus bovis biotype II/2 is a separate genospecies and the predominant clinical isolate in adult males. J. Clin. Microbiol. 39:1549-1552.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 1549-1552
    • Clarridge III, J.E.1    Attorri, S.M.2    Zhang, Q.3    Bartell, J.4
  • 10
    • 0036779816 scopus 로고    scopus 로고
    • What happed to the streptococci: Overview of taxonomic and nomenclature changes
    • Facklam, R. 2002. What happed to the streptococci: overview of taxonomic and nomenclature changes. Clin. Microbiol. Rev. 15:613-630.
    • (2002) Clin. Microbiol. Rev. , vol.15 , pp. 613-630
    • Facklam, R.1
  • 11
    • 0029127724 scopus 로고
    • Identification of Streptococcus milleri group isolates to the species level with a commercially available rapid test
    • Flynn, C. E., and K. L. Ruoff. 1995. Identification of Streptococcus milleri group isolates to the species level with a commercially available rapid test. J. Clin. Microbiol. 33:2704-2706.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 2704-2706
    • Flynn, C.E.1    Ruoff, K.L.2
  • 13
    • 0030833814 scopus 로고    scopus 로고
    • Identification of clinically relevant viridans group streptococci to the species level by PCR
    • Garnier, F., G. Gerbaud, P. Courvalin, and M. Galimand. 1997. Identification of clinically relevant viridans group streptococci to the species level by PCR. J. Clin. Microbiol. 35:2337-2341.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 2337-2341
    • Garnier, F.1    Gerbaud, G.2    Courvalin, P.3    Galimand, M.4
  • 14
    • 0032750010 scopus 로고    scopus 로고
    • Identification of clinically relevant viridans streptococci by analysis of transfer DNA intergenic spacer length polymorphism
    • Gheldre, Y. D., P. Vandamme, H. Goossens, and M. J. Struelens. 1999. Identification of clinically relevant viridans streptococci by analysis of transfer DNA intergenic spacer length polymorphism. Int. J. Syst. Bacteriol. 49:1591-1598.
    • (1999) Int. J. Syst. Bacteriol. , vol.49 , pp. 1591-1598
    • Gheldre, Y.D.1    Vandamme, P.2    Goossens, H.3    Struelens, M.J.4
  • 15
    • 0030054296 scopus 로고    scopus 로고
    • New approaches to typing and identification of bacteria using the 16S-23S rDNA spacer region
    • Gurtler, V., and V. A. Stanisich. 1996. New approaches to typing and identification of bacteria using the 16S-23S rDNA spacer region. Microbiology 142:3-16.
    • (1996) Microbiology , vol.142 , pp. 3-16
    • Gurtler, V.1    Stanisich, V.A.2
  • 16
    • 0029895983 scopus 로고    scopus 로고
    • Rapid species identification of "Streptococcus milleri" strains by line blot hybridization: Identification of a distinct 16S rRNA population closely related to Streptococcus constellatus
    • Jacobs, J. A., C. S. Schot, A. E. Bunschoten, and L. M. Schouls. 1996. Rapid species identification of "Streptococcus milleri" strains by line blot hybridization: identification of a distinct 16S rRNA population closely related to Streptococcus constellatus. J. Clin. Microbiol. 34:1717-1721.
    • (1996) J. Clin. Microbiol. , vol.34 , pp. 1717-1721
    • Jacobs, J.A.1    Schot, C.S.2    Bunschoten, A.E.3    Schouls, L.M.4
  • 18
    • 0028924690 scopus 로고
    • Determination of 16S rRNA sequences of Streptococcus mitis and Streptococcus gordonii and phylogenetic relationships among members of the genus Streptococcus
    • Kawamura, Y., X. Hou, F. Sultana, H. Miura, and T. Ezaki. 1995. Determination of 16S rRNA sequences of Streptococcus mitis and Streptococcus gordonii and phylogenetic relationships among members of the genus Streptococcus. Int. J. Syst. Bacteriol. 45:406-408.
    • (1995) Int. J. Syst. Bacteriol. , vol.45 , pp. 406-408
    • Kawamura, Y.1    Hou, X.2    Sultana, F.3    Miura, H.4    Ezaki, T.5
  • 19
    • 0024453078 scopus 로고
    • Taxonomic studies of viridans streptococci: Description of Streptococcus gordonii sp. nov. and emended descriptions of Streptococcus sanguis (White and Niven 1946), Streptococcus oralis (Bridge and Sneath 1982), and Streptococcus mitis (Andrewes and Horder 1906)
    • Kilian, M., L. Mikkelsen, and J. Henrichsen. 1989. Taxonomic studies of viridans streptococci: description of Streptococcus gordonii sp. nov. and emended descriptions of Streptococcus sanguis (White and Niven 1946), Streptococcus oralis (Bridge and Sneath 1982), and Streptococcus mitis (Andrewes and Horder 1906). Int. J. Syst. Bacteriol. 39:471-484.
    • (1989) Int. J. Syst. Bacteriol. , vol.39 , pp. 471-484
    • Kilian, M.1    Mikkelsen, L.2    Henrichsen, J.3
  • 20
    • 0021718944 scopus 로고
    • Relatedness of "Streptococcus milleri" with Streptococcus anginosus and Streptococcus constellatus
    • Kilpper-Bälz, R., B. L. Williams, R. Lutticken, and K. H. Schleifer. 1984. Relatedness of "Streptococcus milleri" with Streptococcus anginosus and Streptococcus constellatus. Syst. Appl. Microbiol. 5:494-500.
    • (1984) Syst. Appl. Microbiol. , vol.5 , pp. 494-500
    • Kilpper-Bälz, R.1    Williams, B.L.2    Lutticken, R.3    Schleifer, K.H.4
  • 21
    • 0034105543 scopus 로고    scopus 로고
    • Comparison of three methods for identification of Streptococcus milleri group isolates to species level
    • Limia, A., T. Alarcon, M. L. Jimenez, and M. Lopez-Brea. 2000. Comparison of three methods for identification of Streptococcus milleri group isolates to species level. Eur. J. Clin. Microbiol. Infect. Dis. 19:128-131.
    • (2000) Eur. J. Clin. Microbiol. Infect. Dis. , vol.19 , pp. 128-131
    • Limia, A.1    Alarcon, T.2    Jimenez, M.L.3    Lopez-Brea, M.4
  • 22
    • 0025515259 scopus 로고
    • Design and analysis of quantitative collaborative studies: Minimum collaborative program
    • McClure, F. D. 1990. Design and analysis of quantitative collaborative studies: minimum collaborative program. J. Assoc. Off. Anal. Chem. 73:953-960.
    • (1990) J. Assoc. Off. Anal. Chem. , vol.73 , pp. 953-960
    • McClure, F.D.1
  • 23
    • 1542723586 scopus 로고    scopus 로고
    • Microarray-based identification of bacteria in clinical samples by solid-phase PCR amplification of 23S ribosomal DNA sequences
    • Mitterer, G., M. Huber, E. Leidinger, C. Kirisits, W. Lubitz, M. W. Mueller, and W. M. Schmidt. 2004. Microarray-based identification of bacteria in clinical samples by solid-phase PCR amplification of 23S ribosomal DNA sequences J. Clin. Microbiol. 42:1048-1057.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 1048-1057
    • Mitterer, G.1    Huber, M.2    Leidinger, E.3    Kirisits, C.4    Lubitz, W.5    Mueller, M.W.6    Schmidt, W.M.7
  • 24
    • 0031974386 scopus 로고    scopus 로고
    • Identification of streptococci to species level by sequencing the gene encoding the manganese-dependent superoxide dismutase
    • Poyart, C., G. Quesne, S. Coulon, P. Berche, and P. Trieu-Cuot. 1998. Identification of streptococci to species level by sequencing the gene encoding the manganese-dependent superoxide dismutase. J. Clin. Microbiol. 36:41-47.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 41-47
    • Poyart, C.1    Quesne, G.2    Coulon, S.3    Berche, P.4    Trieu-Cuot, P.5
  • 25
    • 0000011359 scopus 로고
    • Universal bacterial 16S rDNA amplification and sequencing
    • D. H. Persing, T. F. Smith, F. C. Tenover, and T. J. White (ed.), American Society for Microbiology, Washington, D.C.
    • Relman, D. A. 1993. Universal bacterial 16S rDNA amplification and sequencing, p. 489-495. In D. H. Persing, T. F. Smith, F. C. Tenover, and T. J. White (ed.), Diagnostic molecular microbiology. American Society for Microbiology, Washington, D.C.
    • (1993) Diagnostic Molecular Microbiology , pp. 489-495
    • Relman, D.A.1
  • 26
    • 0031974203 scopus 로고    scopus 로고
    • Differentiation of phylogenetically related slowly growing mycobacteria based on 16S-23S rRNA gene internal transcribed spacer sequences
    • Roth, A., M. Fischer, M. E. Hamid, S. Michalke, W. Ludwig, and H. Mauch. 1998. Differentiation of phylogenetically related slowly growing mycobacteria based on 16S-23S rRNA gene internal transcribed spacer sequences. J. Clin. Microbiol. 36:139-147.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 139-147
    • Roth, A.1    Fischer, M.2    Hamid, M.E.3    Michalke, S.4    Ludwig, W.5    Mauch, H.6
  • 27
    • 0027522679 scopus 로고
    • Genetic diversity within isolates of mutans streptococci recognized by an rRNA gene probe
    • Saarela, M., S. Alaluusua, T. Takei, and S. Asikainen. 1993. Genetic diversity within isolates of mutans streptococci recognized by an rRNA gene probe. J. Clin. Microbiol. 31:584-587.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 584-587
    • Saarela, M.1    Alaluusua, S.2    Takei, T.3    Asikainen, S.4
  • 28
    • 0023879562 scopus 로고
    • Construction of a DNA probe for the specific identification of Streptococcus oralis
    • Schmidhuber, S., W. Ludwig, and K. H. Schleifer. 1988. Construction of a DNA probe for the specific identification of Streptococcus oralis. J. Clin. Microbiol. 26:1042-1044.
    • (1988) J. Clin. Microbiol. , vol.26 , pp. 1042-1044
    • Schmidhuber, S.1    Ludwig, W.2    Schleifer, K.H.3
  • 29
    • 0034056528 scopus 로고    scopus 로고
    • Viridans-group streptococcal infections in immunocompromised hosts
    • Shenep, J. L. 2000. Viridans-group streptococcal infections in immunocompromised hosts. Int. J. Antimicrob. Agents 14:129-135.
    • (2000) Int. J. Antimicrob. Agents , vol.14 , pp. 129-135
    • Shenep, J.L.1
  • 30
    • 0027722578 scopus 로고
    • Enzymatic differentiation and biochemical and serological characteristics of the clinical isolates of Streptococcus anginosus, S. intermedius, and S. constellatus
    • Taketoshi, M., K. Kitada, T. Yakushiji, and M. Inoue. 1993. Enzymatic differentiation and biochemical and serological characteristics of the clinical isolates of Streptococcus anginosus, S. intermedius, and S. constellatus. Microbiology 76:115-129.
    • (1993) Microbiology , vol.76 , pp. 115-129
    • Taketoshi, M.1    Kitada, K.2    Yakushiji, T.3    Inoue, M.4
  • 31
    • 0031865865 scopus 로고    scopus 로고
    • Antimicrobial susceptibility of viridans group streptococci in Taiwan with an emphasis on the high rates of resistance to penicillin and erythromycin in Streptococcus oralis
    • Teng, L. J., P. R. Hsueh, S. W. Ho, and K. T. Luh. 1998. Antimicrobial susceptibility of viridans group streptococci in Taiwan with an emphasis on the high rates of resistance to penicillin and erythromycin in Streptococcus oralis. J. Antimicrob. Chemother. 41:621-627.
    • (1998) J. Antimicrob. Chemother. , vol.41 , pp. 621-627
    • Teng, L.J.1    Hsueh, P.R.2    Ho, S.W.3    Luh, K.T.4
  • 32
    • 0036708302 scopus 로고    scopus 로고
    • groESL sequence determination, phylogenetic analysis, and species differentiation for viridans group streptococci
    • Teng, L.-J., P.-R. Hsueh, J.-C. Tsai, P.-W. Chen, J.-C. Hsu, H.-C. Lai, C.-N. Lee, and S.-W Ho. 2002. groESL sequence determination, phylogenetic analysis, and species differentiation for viridans group streptococci. J. Clin. Microbiol. 40:3172-3178.
    • (2002) J. Clin. Microbiol. , vol.40 , pp. 3172-3178
    • Teng, L.-J.1    Hsueh, P.-R.2    Tsai, J.-C.3    Chen, P.-W.4    Hsu, J.-C.5    Lai, H.-C.6    Lee, C.-N.7    Ho, S.-W.8
  • 33
    • 0026680676 scopus 로고
    • Amplification of the 16S-23S spacer region in rRNA operons of mycoplasmas by the polymerase chain reaction
    • Uemori, T., K. Asada, I. Kato, and R. Harasawa. 1992. Amplification of the 16S-23S spacer region in rRNA operons of mycoplasmas by the polymerase chain reaction. Syst. Appl. Microbiol. 15:181-186.
    • (1992) Syst. Appl. Microbiol. , vol.15 , pp. 181-186
    • Uemori, T.1    Asada, K.2    Kato, I.3    Harasawa, R.4
  • 35
    • 0042922317 scopus 로고    scopus 로고
    • Microarray-based identification of thermophilic Campylobacter jejuni, C. coli, C. lari, and C. upsaliensis
    • Volokhov, D., V. Chizhikov, K. Chumakov, and A. Rasooly. 2003. Microarray-based identification of thermophilic Campylobacter jejuni, C. coli, C. lari, and C. upsaliensis. J. Clin. Microbiol. 41:4071-4080.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 4071-4080
    • Volokhov, D.1    Chizhikov, V.2    Chumakov, K.3    Rasooly, A.4
  • 37
    • 0026567889 scopus 로고
    • Streptococcus intermedius, Streptococcus constellatus, and Streptococcus anginosus (the Streptococcus milleri group): Association with different body sites and clinical infections
    • Whiley, R. A., D. Beighton, T. G. Winstanley, H. Y. Fraser, and J. M. Hardie. 1992. Streptococcus intermedius, Streptococcus constellatus, and Streptococcus anginosus (the Streptococcus milleri group): association with different body sites and clinical infections. J. Clin. Microbiol. 30:243-244.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 243-244
    • Whiley, R.A.1    Beighton, D.2    Winstanley, T.G.3    Fraser, H.Y.4    Hardie, J.M.5
  • 38
    • 0029013127 scopus 로고
    • Heterogeneity among 16S-23S rRNA intergenic spacers of species within the "Streptococcus milleri group"
    • Whiley, R. A., B. Duke, J. M. Hardie, and L. M. C. Hall. 1995. Heterogeneity among 16S-23S rRNA intergenic spacers of species within the "Streptococcus milleri group." Microbiology 141:1461-1467.
    • (1995) Microbiology , vol.141 , pp. 1461-1467
    • Whiley, R.A.1    Duke, B.2    Hardie, J.M.3    Hall, L.M.C.4
  • 39
    • 0025298969 scopus 로고
    • Phenotypic differentiation of Streptococcus intermedius, Streptococcus constellatus. and Streptococcus anginosus strains within the "Streptococcus milleri group."
    • Whiley, R. A., H. Fraser, J. M. Hardie, and D. Beighton. 1990. Phenotypic differentiation of Streptococcus intermedius, Streptococcus constellatus. and Streptococcus anginosus strains within the "Streptococcus milleri group." J. Clin. Microbiol. 48:1497-1501.
    • (1990) J. Clin. Microbiol. , vol.48 , pp. 1497-1501
    • Whiley, R.A.1    Fraser, H.2    Hardie, J.M.3    Beighton, D.4


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