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Volumn 2004, Issue 77, 2004, Pages 3-20

Retroviral-mediated insertional mutagenesis in zebrafish

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; ANIMAL EMBRYO; ARTICLE; GENE EXPRESSION REGULATION; GENE VECTOR; GENETICS; METABOLISM; METHODOLOGY; MOLECULAR CLONING; NUCLEOTIDE SEQUENCE; PROVIRUS; RETROVIRUS; VIRUS DNA CELL DNA INTERACTION; ZEBRA FISH;

EID: 16644375207     PISSN: 0091679X     EISSN: None     Source Type: Book Series    
DOI: 10.1016/s0091-679x(04)77001-6     Document Type: Review
Times cited : (35)

References (54)
  • 1
    • 0030467028 scopus 로고    scopus 로고
    • Insertional mutagenesis in zebrafish identifies two novel genes, pescadillo and dead eye, essential for embryonic development
    • Allende, M. L., Amsterdam, A., Becker, T., Kawakami, K., Gaiano, N., and Hopkins, N. (1996). Insertional mutagenesis in zebrafish identifies two novel genes, pescadillo and dead eye, essential for embryonic development. Genes Dev. 10, 3141-3155.
    • (1996) Genes Dev. , vol.10 , pp. 3141-3155
    • Allende, M.L.1    Amsterdam, A.2    Becker, T.3    Kawakami, K.4    Gaiano, N.5    Hopkins, N.6
  • 2
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • Altschul, S. F., Gish, W., Miller, W., Myers, E. W., and Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Gish, W.2    Miller, W.3    Myers, E.W.4    Lipman, D.J.5
  • 7
    • 0031647714 scopus 로고    scopus 로고
    • Not really finished is crucial for development of the zebrafish outer retina and encodes a transcription factor highly homologous to human Nuclear Respiratory Factor-1 and avian Initiation Binding Repressor
    • Becker, T. S., Burgess, S. M., Amsterdam, A. H., Allende, M. L., and Hopkins, N. (1998). Not really finished is crucial for development of the zebrafish outer retina and encodes a transcription factor highly homologous to human Nuclear Respiratory Factor-1 and avian Initiation Binding Repressor. Development 125, 4369-4378.
    • (1998) Development , vol.125 , pp. 4369-4378
    • Becker, T.S.1    Burgess, S.M.2    Amsterdam, A.H.3    Allende, M.L.4    Hopkins, N.5
  • 8
    • 0027228422 scopus 로고
    • Vesicular stomatitis virus G glycoprotein pseudotyped retroviral vectors: Concentration to very high titer and efficient gene transfer into mammalian and non-mammalian cells
    • Burns, J. C., Friedmann, T., Driever, W., Burrascano, M., and Yee, J.-K. (1993). Vesicular stomatitis virus G glycoprotein pseudotyped retroviral vectors: Concentration to very high titer and efficient gene transfer into mammalian and non-mammalian cells. Proc. Natl. Acad. Sci. USA 90, 8033-8037.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 8033-8037
    • Burns, J.C.1    Friedmann, T.2    Driever, W.3    Burrascano, M.4    Yee, J.-K.5
  • 9
    • 0036171190 scopus 로고    scopus 로고
    • High-throughput selection of retrovirus producer cell lines leads to markedly improved efficiency of germ line-transmissible insertions in zebra fish
    • Chen, W., Burgess, S., Golling, G., Amsterdam, A., and Hopkins, N. (2002). High-throughput selection of retrovirus producer cell lines leads to markedly improved efficiency of germ line-transmissible insertions in zebra fish. J. Virol. 76, 2192-2198.
    • (2002) J. Virol. , vol.76 , pp. 2192-2198
    • Chen, W.1    Burgess, S.2    Golling, G.3    Amsterdam, A.4    Hopkins, N.5
  • 10
    • 0023848501 scopus 로고
    • Insertional mutagenesis of the Drosophila genome with single P elements
    • Cooley, L., Kelley, R., and Spradling, A. (1988). Insertional mutagenesis of the Drosophila genome with single P elements. Science 239, 1121-1128.
    • (1988) Science , vol.239 , pp. 1121-1128
    • Cooley, L.1    Kelley, R.2    Spradling, A.3
  • 11
    • 0025774041 scopus 로고
    • High-frequency germ-line transmission of plasmid DNA sequences injected into fertilized zebrafish eggs
    • Culp, P., Nusslein-Volhard, C., and Hopkins, N. (1991). High-frequency germ-line transmission of plasmid DNA sequences injected into fertilized zebrafish eggs. Proc. Natl. Acad. Sci. USA 88, 7953-7957.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 7953-7957
    • Culp, P.1    Nusslein-Volhard, C.2    Hopkins, N.3
  • 13
    • 16644377513 scopus 로고    scopus 로고
    • A highthroughput method for indentifying ENU-induced point mutations in zebrafish
    • Draper, B. W., McCallum, C. M., Stout, J. L., Slade, A. J., and Moens, C. B. (2004). A highthroughput method for indentifying ENU-induced point mutations in zebrafish. Methods Cell Biol. 77, 91-112.
    • (2004) Methods Cell Biol. , vol.77 , pp. 91-112
    • Draper, B.W.1    McCallum, C.M.2    Stout, J.L.3    Slade, A.J.4    Moens, C.B.5
  • 15
    • 0036081052 scopus 로고    scopus 로고
    • The FlyBase database of the Drosophila genome projects and community literature
    • FlyBase Consortium(2002). The FlyBase database of the Drosophila genome projects and community literature. Nucleic Acids Res. 30, 106-108.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 106-108
  • 18
    • 0029844892 scopus 로고    scopus 로고
    • Insertional mutagenesis and rapid cloning of essential genes in zebrafish
    • Gaiano, N., Amsterdam, A., Kawakami, K., Allende, M., Becker, T., and Hopkins, N. (1996b). Insertional mutagenesis and rapid cloning of essential genes in zebrafish. Nature 383, 829-832.
    • (1996) Nature , vol.383 , pp. 829-832
    • Gaiano, N.1    Amsterdam, A.2    Kawakami, K.3    Allende, M.4    Becker, T.5    Hopkins, N.6
  • 23
    • 0027619451 scopus 로고
    • Enhanced incorporation of transgenic DNA into zebrafish chromosomes by a retroviral integration protein
    • Ivies, Z., Izsvak, Z., and Hackett, P. B. (1993). Enhanced incorporation of transgenic DNA into zebrafish chromosomes by a retroviral integration protein. Mol. Mar. Biol. Biotech. 2, 162-173.
    • (1993) Mol. Mar. Biol. Biotech. , vol.2 , pp. 162-173
    • Ivies, Z.1    Izsvak, Z.2    Hackett, P.B.3
  • 24
    • 0030444452 scopus 로고    scopus 로고
    • Tumor suppressor gene mutations in mice
    • Jacks, T. (1996). Tumor suppressor gene mutations in mice. Annu. Rev. Genet. 30, 603-636.
    • (1996) Annu. Rev. Genet. , vol.30 , pp. 603-636
    • Jacks, T.1
  • 25
    • 16644388669 scopus 로고    scopus 로고
    • Cloning of zebrafish by nuclear transfer
    • Ju, B., Huang, H., Lee, K.-Y., and Lin, S. (2004). Cloning of zebrafish by nuclear transfer. Methods Cell Biol. 77, 405-413.
    • (2004) Methods Cell Biol. , vol.77 , pp. 405-413
    • Ju, B.1    Huang, H.2    Lee, K.-Y.3    Lin, S.4
  • 26
    • 0034633628 scopus 로고    scopus 로고
    • Identification of a functional transposase of the Tol2 element, an Ac-like element from the Japanese medaka fish, and its transposition in the zebrafish germ lineage
    • Lin, S., Kawakami, K., Shima, A., and Kawakami, N. (2000). Identification of a functional transposase of the Tol2 element, an Ac-like element from the Japanese medaka fish, and its transposition in the zebrafish germ lineage. Proc. Natl. Acad. Sci. USA 97, 11403-11408.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 11403-11408
    • Lin, S.1    Kawakami, K.2    Shima, A.3    Kawakami, N.4
  • 27
    • 16644391315 scopus 로고    scopus 로고
    • The transgenesis and the gene trap methods in zebrafish using the Tol2 transposable element
    • Kawakami, K., (2004). The transgenesis and the gene trap methods in zebrafish using the Tol2 transposable element. Methods Cell Biol. 77, 201-222.
    • (2004) Methods Cell Biol. , vol.77 , pp. 201-222
    • Kawakami, K.1
  • 28
    • 4344636300 scopus 로고    scopus 로고
    • A transposon-mediated gene trap approach identifies developmentally regulated genes in zebrafish
    • Kawakami, K., Takeda, H., Kawakami, N., Kobayashi, M., Matsuda, N., and Mishina, M. (2004). A transposon-mediated gene trap approach identifies developmentally regulated genes in zebrafish. Dev. Cell 7, 133-144.
    • (2004) Dev. Cell , vol.7 , pp. 133-144
    • Kawakami, K.1    Takeda, H.2    Kawakami, N.3    Kobayashi, M.4    Matsuda, N.5    Mishina, M.6
  • 29
    • 0036022515 scopus 로고    scopus 로고
    • Cloned zebrafish by nuclear transfer from long-term-cultured cells
    • Lee, K. Y., Huang, H., Ju, B., Yang, Z., and Lin, S. (2002). Cloned zebrafish by nuclear transfer from long-term-cultured cells. Nat. Biotechnol. 20, 795-799.
    • (2002) Nat. Biotechnol. , vol.20 , pp. 795-799
    • Lee, K.Y.1    Huang, H.2    Ju, B.3    Yang, Z.4    Lin, S.5
  • 30
    • 0028124366 scopus 로고
    • Integration and germ-line transmission of a pseudotyped retroviral vector in zebrafish
    • Lin, S., Gaiano, N., Culp, P., Burns, J. C., Friedmann, T., Yee, J.-K., and Hopkins, N. (1994). Integration and germ-line transmission of a pseudotyped retroviral vector in zebrafish. Science 265, 666-669.
    • (1994) Science , vol.265 , pp. 666-669
    • Lin, S.1    Gaiano, N.2    Culp, P.3    Burns, J.C.4    Friedmann, T.5    Yee, J.-K.6    Hopkins, N.7
  • 31
    • 0028387996 scopus 로고
    • Large-scale mutagenesis in the zebrafish: In search of genes controlling development in a vertebrate
    • Mullins, M. C., Hammerschmidt, M., Haffter, P., and Nusslein-Volhard, C. (1994). Large-scale mutagenesis in the zebrafish: In search of genes controlling development in a vertebrate. Curr. Biol. 4, 189-202.
    • (1994) Curr. Biol. , vol.4 , pp. 189-202
    • Mullins, M.C.1    Hammerschmidt, M.2    Haffter, P.3    Nusslein-Volhard, C.4
  • 32
    • 0033780376 scopus 로고    scopus 로고
    • Effective targeted gene 'knockdown' in zebrafish
    • Nasevicius, A., and Ekker, S. C. (2000). Effective targeted gene 'knockdown' in zebrafish. Nat. Genet. 26, 216-220.
    • (2000) Nat. Genet. , vol.26 , pp. 216-220
    • Nasevicius, A.1    Ekker, S.C.2
  • 33
    • 0031848798 scopus 로고    scopus 로고
    • Frameshift mutation, A263fsinsGG, in the hepatocyte nuclear factor-1beta gene associated with diabetes and renal dysfunction
    • Nishigori, H., Yamada, S., Kohama, T., Tomura, H., Sho, K., Horikawa, Y., Bell, G. I., Takeuchi, T., and Takeda, J. (1998). Frameshift mutation, A263fsinsGG, in the hepatocyte nuclear factor-1beta gene associated with diabetes and renal dysfunction. Diabetes 47, 1354-1355.
    • (1998) Diabetes , vol.47 , pp. 1354-1355
    • Nishigori, H.1    Yamada, S.2    Kohama, T.3    Tomura, H.4    Sho, K.5    Horikawa, Y.6    Bell, G.I.7    Takeuchi, T.8    Takeda, J.9
  • 34
    • 0030951859 scopus 로고    scopus 로고
    • Zebrafish genomics: From mutants to genes
    • Postlethwait, J. H., and Talbot, W. S. (1997). Zebrafish genomics: From mutants to genes. Trends Genet. 13, 183-190.
    • (1997) Trends Genet. , vol.13 , pp. 183-190
    • Postlethwait, J.H.1    Talbot, W.S.2
  • 35
    • 0032518560 scopus 로고    scopus 로고
    • Transposition of the nematode Caenorhabditis elegans Tc3 element in the zebrafish Danio rerio
    • Raz, E., van Luenen, H. G. A. M., Schaerringer, B., Plasterk, R. H. A., and Driever, W. (1997). Transposition of the nematode Caenorhabditis elegans Tc3 element in the zebrafish Danio rerio. Curr. Biol. 8, 82-88.
    • (1997) Curr. Biol. , vol.8 , pp. 82-88
    • Raz, E.1    Van Luenen, H.G.A.M.2    Schaerringer, B.3    Plasterk, R.H.A.4    Driever, W.5
  • 36
    • 0037249566 scopus 로고    scopus 로고
    • MTID: A database of Sleeping Beauty transposon insertions in mice
    • Roberg-Perez, K., Carlson, C. M., and Largaespada, D. A. (2003). MTID: A database of Sleeping Beauty transposon insertions in mice. Nucleic Acids Res. 31, 78-81.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 78-81
    • Roberg-Perez, K.1    Carlson, C.M.2    Largaespada, D.A.3
  • 37
    • 0028264119 scopus 로고
    • Evidence for the complete inactivation of the NF2 gene in the majority of sporadic meningiomas
    • Ruttledge, M. H., Sarrazin, J., Rangarantnam, S., Phelan, C. M., Twist, E., et al. (1994). Evidence for the complete inactivation of the NF2 gene in the majority of sporadic meningiomas. Nat. Genet. 6, 180-184.
    • (1994) Nat. Genet. , vol.6 , pp. 180-184
    • Ruttledge, M.H.1    Sarrazin, J.2    Rangarantnam, S.3    Phelan, C.M.4    Twist, E.5
  • 38
    • 0028270120 scopus 로고
    • Efficient recovery of ENU-induced mutations from the zebrafish germline
    • Solnica-Krezel, L., Schier, A. F., and Driever, W. (1994). Efficient recovery of ENU-induced mutations from the zebrafish germline. Genetics 136, 1401-1420.
    • (1994) Genetics , vol.136 , pp. 1401-1420
    • Solnica-Krezel, L.1    Schier, A.F.2    Driever, W.3
  • 39
    • 0032883802 scopus 로고    scopus 로고
    • The Berkeley Drosophila Genome Project gene disruption project: Single P-element insertions mutating 25% of vital Drosophila genes
    • Spradling, A. C., Stern, D., Beaton, A., Rhem, E. J., Laverty, T., Mozden, N., Misra, S., and Rubin, G. M. (1999). The Berkeley Drosophila Genome Project gene disruption project: Single P-element insertions mutating 25% of vital Drosophila genes. Genetics 153, 135-177.
    • (1999) Genetics , vol.153 , pp. 135-177
    • Spradling, A.C.1    Stern, D.2    Beaton, A.3    Rhem, E.J.4    Laverty, T.5    Mozden, N.6    Misra, S.7    Rubin, G.M.8
  • 40
    • 0035487038 scopus 로고    scopus 로고
    • Gene-trap mutagenesis: Past, present and beyond
    • Stanford, W. L., Cohn, J. B., and Cordes, S. P. (2001). Gene-trap mutagenesis: Past, present and beyond. Nat. Rev. Genet. 2, 756-768.
    • (2001) Nat. Rev. Genet. , vol.2 , pp. 756-768
    • Stanford, W.L.1    Cohn, J.B.2    Cordes, S.P.3
  • 41
    • 0742323536 scopus 로고    scopus 로고
    • TILLING - A high-throughput harvest for functional genomics
    • Stemple, D. L. (2004). TILLING-a high-throughput harvest for functional genomics. Nat. Rev. Genet. 5, 145-150.
    • (2004) Nat. Rev. Genet. , vol.5 , pp. 145-150
    • Stemple, D.L.1
  • 42
    • 0023884698 scopus 로고
    • Replication, integration and stable germline transmission of foreign sequences injected into early zebrafish embryos
    • Stuart, G. W., McMurray, J. V., and Westerfield, M. (1988). Replication, integration and stable germline transmission of foreign sequences injected into early zebrafish embryos. Development 103, 403-412.
    • (1988) Development , vol.103 , pp. 403-412
    • Stuart, G.W.1    McMurray, J.V.2    Westerfield, M.3
  • 43
    • 0035577271 scopus 로고    scopus 로고
    • Vhnf1, the MODY5 and familial GCKD-associated gene, regulates regional specification of the zebrafish gut, pronephros, and hindbrain
    • Sun, Z., and Hopkins, N. (2001). vhnf1, the MODY5 and familial GCKD-associated gene, regulates regional specification of the zebrafish gut, pronephros, and hindbrain. Genes Dev. 15, 3217-3229.
    • (2001) Genes Dev. , vol.15 , pp. 3217-3229
    • Sun, Z.1    Hopkins, N.2
  • 45
    • 0006703917 scopus 로고
    • Rhabdoviridae and their replication
    • B. N. Fields and D. M. Knipe, eds., Raven Press, New York
    • Wagner, R. R. (1972). Rhabdoviridae and their replication. In Fundamental Virology (B. N. Fields and D. M. Knipe, eds.), pp. 489-503. Raven Press, New York.
    • (1972) Fundamental Virology , pp. 489-503
    • Wagner, R.R.1
  • 46
    • 0032615786 scopus 로고    scopus 로고
    • Haploid screens and gamma-ray mutagenesis
    • Walker, C. (1999). Haploid screens and gamma-ray mutagenesis. Methods Cell Biol. 60, 43-70.
    • (1999) Methods Cell Biol. , vol.60 , pp. 43-70
    • Walker, C.1
  • 47
    • 0016347069 scopus 로고
    • Phenotypic mixing between vesicular stomatitis virus and avian RNA tumor viruses
    • Weiss, R. A., Boettiger, D., and Love, D. N. (1974). Phenotypic mixing between vesicular stomatitis virus and avian RNA tumor viruses. Cold Spring Harbor Symp. Quant. Biol. 39, 913-918.
    • (1974) Cold Spring Harbor Symp. Quant. Biol. , vol.39 , pp. 913-918
    • Weiss, R.A.1    Boettiger, D.2    Love, D.N.3
  • 49
    • 16644396292 scopus 로고    scopus 로고
    • Target-selected gene activation in zebrafish
    • Wienholds, E., and Plasterk, R. H. (2004). Target-selected gene activation in zebrafish. Methods Cell Biol. 77, 69-90.
    • (2004) Methods Cell Biol. , vol.77 , pp. 69-90
    • Wienholds, E.1    Plasterk, R.H.2
  • 52
    • 0030928578 scopus 로고    scopus 로고
    • Zebrafish vasa homologue RNA is localized to the cleavage planes of 2- and 4-cell-stage embryos and is expressed in the primordial germ cells
    • Yoon, C., Kawakami, K., and Hopkins, N. (1997). Zebrafish vasa homologue RNA is localized to the cleavage planes of 2- and 4-cell-stage embryos and is expressed in the primordial germ cells. Development 124, 3157-3165.
    • (1997) Development , vol.124 , pp. 3157-3165
    • Yoon, C.1    Kawakami, K.2    Hopkins, N.3
  • 53
    • 0036157241 scopus 로고    scopus 로고
    • Zebrafish yolk-specific not really started (nrs) gene is a vertebrate homolog of the Drosophila spinster gene and is essential for embryogenesis
    • Young, R. M., Marty, S., Nakano, Y., Wang, H., Yamamoto, D., Lin, S., and Allende, M. L. (2002). Zebrafish yolk-specific not really started (nrs) gene is a vertebrate homolog of the Drosophila spinster gene and is essential for embryogenesis. Dev. Dyn. 223, 298-305.
    • (2002) Dev. Dyn. , vol.223 , pp. 298-305
    • Young, R.M.1    Marty, S.2    Nakano, Y.3    Wang, H.4    Yamamoto, D.5    Lin, S.6    Allende, M.L.7
  • 54
    • 0027328348 scopus 로고
    • Target-selected gene inactivation in Caenorhabditis elegans by using a frozen transposon insertion mutant bank
    • Zwaal, R. R., Broeks, A., van Meurs, J., Groenen, J. T., and Plasterk, R. H. (1993). Target-selected gene inactivation in Caenorhabditis elegans by using a frozen transposon insertion mutant bank. Proc. Natl. Acad. Sci. USA 90, 7431-7435.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 7431-7435
    • Zwaal, R.R.1    Broeks, A.2    Van Meurs, J.3    Groenen, J.T.4    Plasterk, R.H.5


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