-
1
-
-
0034682511
-
Crystal structure of the HIV-1 integrase catalytic core and C-terminal domains: A model for viral DNA binding
-
Chen, J.C., Krucinski, J., Miercke, L.J., Finer-Moore, J.S., Tang, A.H., Leavitt, A.D. & Stroud, R.M. (2000) Crystal structure of the HIV-1 integrase catalytic core and C-terminal domains: a model for viral DNA binding. Proc. Natl Acad. Sci. USA 97, 8233-8238.
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, pp. 8233-8238
-
-
Chen, J.C.1
Krucinski, J.2
Miercke, L.J.3
Finer-Moore, J.S.4
Tang, A.H.5
Leavitt, A.D.6
Stroud, R.M.7
-
2
-
-
0032601402
-
HIV integrase structure and function
-
Esposito, D. & Craigie, R. (1999) HIV integrase structure and function. Adv. Virus Res. 52, 319-333.
-
(1999)
Adv. Virus Res.
, vol.52
, pp. 319-333
-
-
Esposito, D.1
Craigie, R.2
-
3
-
-
0032544311
-
Crystal structures of the catalytic domain of HIV-1 integrase free and complexed with its metal cofactor: High level of similarity of the active site with other viral integrases
-
Maignan, S., Guilloteau, J.P., Zhou-Liu, Q., Clement-Mella, C. & Mikol, V. (1998) Crystal structures of the catalytic domain of HIV-1 integrase free and complexed with its metal cofactor: high level of similarity of the active site with other viral integrases. J. Mol. Biol. 282, 359-368.
-
(1998)
J. Mol. Biol.
, vol.282
, pp. 359-368
-
-
Maignan, S.1
Guilloteau, J.P.2
Zhou-Liu, Q.3
Clement-Mella, C.4
Mikol, V.5
-
4
-
-
0032483022
-
Three new structures of the core domain of HIV-1 integrase: An active site that binds magnesium
-
Goldgur, Y., Dyda, F., Hickman, A.B., Jenkins, T.M., Craigie, R. & Davies, D.R. (1998) Three new structures of the core domain of HIV-1 integrase: an active site that binds magnesium. Proc. Natl Acad. Sci. USA 95, 9150-9154.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 9150-9154
-
-
Goldgur, Y.1
Dyda, F.2
Hickman, A.B.3
Jenkins, T.M.4
Craigie, R.5
Davies, D.R.6
-
5
-
-
0026072804
-
Substrate specificity of recombinant human immunodeficiency virus integrase protein
-
LaFemina, R.L., Callahan, P.L. & Cordingley, M.G. (1991) Substrate specificity of recombinant human immunodeficiency virus integrase protein. J. Virol. 65, 5624-5630.
-
(1991)
J. Virol.
, vol.65
, pp. 5624-5630
-
-
LaFemina, R.L.1
Callahan, P.L.2
Cordingley, M.G.3
-
6
-
-
0026693410
-
Human immunodeficiency virus type 1 integrase protein: DNA sequence requirements for cleaving and joining reactions
-
Sherman, P.A., Dickson, M.L. & Fyfe, J.A. (1992) Human immunodeficiency virus type 1 integrase protein: DNA sequence requirements for cleaving and joining reactions. J. Virol. 66, 3593-3601.
-
(1992)
J. Virol.
, vol.66
, pp. 3593-3601
-
-
Sherman, P.A.1
Dickson, M.L.2
Fyfe, J.A.3
-
7
-
-
0029166510
-
Processing of deoxyuridine mismatches and abasic sites by human immunodeficiency virus type-1 integrase
-
Mazumder, A. & Pommier, Y. (1995) Processing of deoxyuridine mismatches and abasic sites by human immunodeficiency virus type-1 integrase. Nucleic Acids Res. 23, 2865-2871.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 2865-2871
-
-
Mazumder, A.1
Pommier, Y.2
-
8
-
-
0031050297
-
Disruption of the terminal base pairs of retroviral DNA during integration
-
Scottline, B.P., Chow, S., Ellison, V. & Brown, P.O. (1997) Disruption of the terminal base pairs of retroviral DNA during integration. Genes Dev. 11, 371-382.
-
(1997)
Genes Dev.
, vol.11
, pp. 371-382
-
-
Scottline, B.P.1
Chow, S.2
Ellison, V.3
Brown, P.O.4
-
9
-
-
0032189652
-
Sequence specificity of viral end DNA binding by HIV-1 integrase reveals critical regions for protein DNA interactions
-
Esposito, D. & Craigie, R. (1998) Sequence specificity of viral end DNA binding by HIV-1 integrase reveals critical regions for protein DNA interactions. EMBO J. 17, 5832-5843.
-
(1998)
EMBO J.
, vol.17
, pp. 5832-5843
-
-
Esposito, D.1
Craigie, R.2
-
10
-
-
0033596860
-
Major and minor groove contacts in retroviral integrase-LTR interactions
-
Wang, T., Balakrishnan, M. & Jonsson, C.B. (1999) Major and minor groove contacts in retroviral integrase-LTR interactions. Biochemistry 38, 3624-3632.
-
(1999)
Biochemistry
, vol.38
, pp. 3624-3632
-
-
Wang, T.1
Balakrishnan, M.2
Jonsson, C.B.3
-
11
-
-
0032546530
-
Thermodynamic consequences of an abasic lesion in duplex DNA are strongly dependent on base sequence
-
Gelfand, C.A., Plum, G.E., Grollman, A.P., Johnson, F. & Breslauer, K.J. (1998) Thermodynamic consequences of an abasic lesion in duplex DNA are strongly dependent on base sequence. Biochemistry 37, 7321-7327.
-
(1998)
Biochemistry
, vol.37
, pp. 7321-7327
-
-
Gelfand, C.A.1
Plum, G.E.2
Grollman, A.P.3
Johnson, F.4
Breslauer, K.J.5
-
12
-
-
0031911884
-
Synthesis and properties of modified oligodeoxyribonucelotides containing 9-(2-amino-2-deoxy-beta-D-arabinofuranosyl) adenine
-
Zubin, E.M., Antsypovich, S.I., Oretskaya, T.S., Romanova, E.A., Volkov, E.M., Tashlitsky, V.N., Dolinnaya, N.G. & Shabarova, Z.A. (1998) Synthesis and properties of modified oligodeoxyribonucelotides containing 9-(2-amino-2-deoxy-beta-D-arabinofuranosyl) adenine. Nucleosides Nucleotides 17, 425-440.
-
(1998)
Nucleosides Nucleotides
, vol.17
, pp. 425-440
-
-
Zubin, E.M.1
Antsypovich, S.I.2
Oretskaya, T.S.3
Romanova, E.A.4
Volkov, E.M.5
Tashlitsky, V.N.6
Dolinnaya, N.G.7
Shabarova, Z.A.8
-
13
-
-
0028871131
-
Incorporation of 2′-amido-nucleosides in oligodeoxynucleotides and oligoribonucleotides as a model for 2′-linked conjugates
-
Hendríx, C., Devreese, B., Rozenski, J., Van Aerschot, A., De Bruyn, A., Van Seeumen, J. & Herdewijn, P. (1995) Incorporation of 2′-amido-nucleosides in oligodeoxynucleotides and oligoribonucleotides as a model for 2′-linked conjugates. Nucleic Acids Res. 23, 51-57.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 51-57
-
-
Hendríx, C.1
Devreese, B.2
Rozenski, J.3
Van Aerschot, A.4
De Bruyn, A.5
Van Seeumen, J.6
Herdewijn, P.7
-
14
-
-
0032797181
-
Oligonucleotide-peptide conjugates as potential antisense agents
-
Zubin, E.M., Romanova, E.A., Volkov, E.M., Tashlitsky, V.N., Korshunova, G.A., Shabarova, Z.A. & Oretskaya, T.S. (1999) Oligonucleotide-peptide conjugates as potential antisense agents. FEBS Lett. 456, 59-62.
-
(1999)
FEBS Lett.
, vol.456
, pp. 59-62
-
-
Zubin, E.M.1
Romanova, E.A.2
Volkov, E.M.3
Tashlitsky, V.N.4
Korshunova, G.A.5
Shabarova, Z.A.6
Oretskaya, T.S.7
-
15
-
-
0347546952
-
Chemical synthesis of oligonucleotides containing 2′-amino- 2′-deoxyuridine residues
-
Kuznetsova, L.G., Volkov, E.M., Romanova, E.A., Tashlitsky, V.N., Oretskaya, T.S. & Shabarova, Z.A. (1991) Chemical synthesis of oligonucleotides containing 2′-amino-2′-deoxyuridine residues. Bioorg. Khimiya (Russia) 17, 1289-1291.
-
(1991)
Bioorg. Khimiya (Russia)
, vol.17
, pp. 1289-1291
-
-
Kuznetsova, L.G.1
Volkov, E.M.2
Romanova, E.A.3
Tashlitsky, V.N.4
Oretskaya, T.S.5
Shabarova, Z.A.6
-
16
-
-
0034622428
-
2+-dependent activities of recombinant human immunodeficiency virus type 1 integrase
-
2+-dependent activities of recombinant human immunodeficiency virus type 1 integrase. Biochemistry 39, 9285-9294.
-
(2000)
Biochemistry
, vol.39
, pp. 9285-9294
-
-
Leh, H.1
Brodin, P.2
Bischerour, J.3
Deprez, E.4
Taue, P.5
Brochon, J.C.6
LeCam, E.7
Coulaud, D.8
Auclair, C.9
Mouscadet, J.F.10
-
17
-
-
0024240742
-
Synthesis and properties of DNA duplexes containing hydrocarbon bridges instead of a nucleoside residue
-
Kuznetsova, S.A., Volkov, E.M., Gromova, E.S., Potapov, V.K. & Shabarova, Z.A. (1988) Synthesis and properties of DNA duplexes containing hydrocarbon bridges instead of a nucleoside residue. Bioorg. Khimiya (Russia) 14, 1655-1662.
-
(1988)
Bioorg. Khimiya (Russia)
, vol.14
, pp. 1655-1662
-
-
Kuznetsova, S.A.1
Volkov, E.M.2
Gromova, E.S.3
Potapov, V.K.4
Shabarova, Z.A.5
-
18
-
-
0037827778
-
Strategy to discriminate between high and low affinity bindings of human immunodeficiency virus, type 1 integrase to viral DNA
-
Zargarian, L., Benleumi, M.S., Renisio, J.G., Merad, H., Maroun, R.G., Wieber, F., Mauffret, O., Porumb, H., Troalen, F. & Fermandjian, S. (2003) Strategy to discriminate between high and low affinity bindings of human immunodeficiency virus, type 1 integrase to viral DNA. J. Biol. Chem. 278, 19966-19973.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 19966-19973
-
-
Zargarian, L.1
Benleumi, M.S.2
Renisio, J.G.3
Merad, H.4
Maroun, R.G.5
Wieber, F.6
Mauffret, O.7
Porumb, H.8
Troalen, F.9
Fermandjian, S.10
-
19
-
-
0043166967
-
Dynamic, thermodynamic, and kinetic basis for recognition and transformation of DNA by human immunodeficiency virus type 1 integrase
-
Bugreev, D.V., Baranova, S., Zakharova, O.D., Parissi, V., Desjobert, C., Sottofattori, E., Balbi, A., Litvak, S., Tarrago-Litvak, L. & Nevinsky, G.A. (2003) Dynamic, thermodynamic, and kinetic basis for recognition and transformation of DNA by human immunodeficiency virus type 1 integrase. Biochemistry 42, 9235-9247.
-
(2003)
Biochemistry
, vol.42
, pp. 9235-9247
-
-
Bugreev, D.V.1
Baranova, S.2
Zakharova, O.D.3
Parissi, V.4
Desjobert, C.5
Sottofattori, E.6
Balbi, A.7
Litvak, S.8
Tarrago-Litvak, L.9
Nevinsky, G.A.10
-
20
-
-
0028309772
-
Molecular mechanism of retroviral DNA integration
-
Kulkosky, J. & Skalka, A.M. (1994) Molecular mechanism of retroviral DNA integration. Pharmacol Ther. 61, 185-203.
-
(1994)
Pharmacol Ther.
, vol.61
, pp. 185-203
-
-
Kulkosky, J.1
Skalka, A.M.2
-
21
-
-
0028089732
-
DNA substrate requirements for different activities of the human immunodeficiency virus type 1 integrase protein
-
van den Ent, F.M., Vink, C. & Plasterk, R.H. (1994) DNA substrate requirements for different activities of the human immunodeficiency virus type 1 integrase protein. J. Virol. 68, 7825-7832.
-
(1994)
J. Virol.
, vol.68
, pp. 7825-7832
-
-
Van Den Ent, F.M.1
Vink, C.2
Plasterk, R.H.3
-
22
-
-
0028020102
-
Methylphosphonodiester substitution near the conserved CA dinucleotide in the HIV LTR alters both extent of 3′-processing and choice of nucleophile by HIV-1 integrase
-
Mazumder, A., Gupta, M. & Pommier, Y. (1994) Methylphosphonodiester substitution near the conserved CA dinucleotide in the HIV LTR alters both extent of 3′-processing and choice of nucleophile by HIV-1 integrase. Nucleic Acids Res. 22, 4441-4448.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4441-4448
-
-
Mazumder, A.1
Gupta, M.2
Pommier, Y.3
-
23
-
-
0032522139
-
DNA bending: The prevalence of kinkiness and the virtues of normality
-
Dickerson, R.E. (1998) DNA bending: the prevalence of kinkiness and the virtues of normality. Nucleic Acids Res. 26, 1906-1926.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 1906-1926
-
-
Dickerson, R.E.1
-
24
-
-
0034614483
-
Sequence-dependent DNA structure: Dinucleotide conformational maps
-
Packer, M.J., Dauncey, M.P. & Hunter, C.A. (2000) Sequence-dependent DNA structure: dinucleotide conformational maps. J. Mol. Biol. 295, 71-83.
-
(2000)
J. Mol. Biol.
, vol.295
, pp. 71-83
-
-
Packer, M.J.1
Dauncey, M.P.2
Hunter, C.A.3
-
25
-
-
0032029586
-
Flexibility of the B-DNA backbone: Effects of local and neighbouring sequences on pyrimidine-purine steps
-
Bertrand, H., Ha-Duong, T., Fermandjian, S. & Hartmann, B. (1998) Flexibility of the B-DNA backbone: effects of local and neighbouring sequences on pyrimidine-purine steps. Nucleic Acids Res. 26, 1261-1267.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 1261-1267
-
-
Bertrand, H.1
Ha-Duong, T.2
Fermandjian, S.3
Hartmann, B.4
-
26
-
-
2542609960
-
Helix bending as a factor in protein/DNA recognition
-
Dickerson, R.E. & Chiu, T.K. (1997) Helix bending as a factor in protein/DNA recognition. Biopolymers 44, 361-403.
-
(1997)
Biopolymers
, vol.44
, pp. 361-403
-
-
Dickerson, R.E.1
Chiu, T.K.2
-
27
-
-
0033574510
-
Protein-DNA interactions: A structural analysis
-
Jones, S., van Heyningen, P., Berman, H.M. & Thornton, J.M. (1999) Protein-DNA interactions: a structural analysis. J. Mol. Biol. 287, 877-896.
-
(1999)
J. Mol. Biol.
, vol.287
, pp. 877-896
-
-
Jones, S.1
Van Heyningen, P.2
Berman, H.M.3
Thornton, J.M.4
-
28
-
-
0033560675
-
Damage increases the flexibility of duplex DNA
-
Marathias, V.M., Jerkovic, B. & Bolton, P.H. (1999) Damage increases the flexibility of duplex DNA. Nucleic Acids Res. 27, 1854-1858.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 1854-1858
-
-
Marathias, V.M.1
Jerkovic, B.2
Bolton, P.H.3
|