Damage increases the flexibility of duplex DNA

Nucleic Acids Research

Volumn 27, Issue 8, 1999, Pages 1854-1858

  Marathias, Vasilios M ^a   Jerkovic, Bozidar ^a   Bolton, Philip H ^a  

^a WESLEYAN UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

APURINIC ACID; DOUBLE STRANDED DNA; GLYCOL; THYMINE; UREA;

APYRIMIDINIC SITE; ARTICLE; BASE MISPAIRING; DIFFUSION; DNA DAMAGE; DNA STRUCTURE; MOLECULAR RECOGNITION; PRIORITY JOURNAL;

DIFFUSION; DNA; DNA DAMAGE; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; NUCLEIC ACID HETERODUPLEXES; PLIABILITY;

EID: 0033560675     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/27.8.1854     Document Type: Article

References (63)

1. Friedberg, E.C., Walker, G.C. and Siede, W. (1995) DNA Repair and Mutagenesis. ASM, Washington, DC.
2. Griffin, S. (1996) Curr. Biol., 6, 497-499.
3. Jiricny, J. (1996) Cancer Surv., 28, 47-68.
4. Loft, S. and Poulsen, H.E. (1996) J. Mol. Med., 74, 297-312.
5. Loeb, L.A. (1996) Cancer Surv., 28, 329-342.
6. Sherr, C.J. (1996) Science, 214, 1672-1677.
7. Stillman, B. (1996) Science, 274, 1659-1664.
8. Nojima, H. (1997) Human Cell, 10, 221-230.
9. O'Connor, P.M. and Fan, S. (1996) Prog. Cell Cycle Res., 2, 165-173.
10. Weinert, T. (1998) Cell, 94, 555-558.
11. Weinert, T. (1998) Curr. Opin. Genet. Dev., 8, 185-193.
12. DiLeonardo, A., Linke, S.P., Clarkin, K. and Wahl, G.M. (1994) Genes Dev., 8, 2540-2551.
13. Hartwell, L.H. and Kastan, M.B. (1994) Science, 266, 1821-1827.
14. Muller, S.J. and Caradonna, S. (1993) J. Biol. Chem., 268, 1310-1319.
15. Strasser, A., Harris, A.W., Jacks, T. and Cory, S. (1994) Cell, 78, 329-339.
16. Nasmyth, K. (1996) Science, 274, 1643-1645.
17. Edgar, B.A. and Lehner, C.F. (1996) Science, 274, 1646-1652.
18. Elledge, S.J. (1996) Science, 274, 1664-1672.
19. King, R.W., Deshaies, R.J., Peters, J.-M. and Kirschner, M.W. (1996) Science, 274, 1652-1659.
20. Crothers, D.M. (1998) Proc. Natl Acad. Sci. USA, 95, 15163-15165.
21. Harrington, R.E. (1992) Mol. Microbiol., 6, 2549-2555.
22. Klungland, A., Hoss, M., Gunz, D., Constantinou, A., Clarkson, S.G., Doetsch, P.W., Bolton, P.H., Wood, R.D. and Lindahl, T. (1999) Mol. Cell, 3, 33-42.
23. Tomonaga, J., Michelotti, G.A., Libutti, D., Uy, A., Sauer, B. and Levens, D. (1998) Mol. Cell, 1, 759-764.
24. Gordienko, I. and Rupp, W.D. (1997) EMBO J., 16, 889-895.
25. Gordienko, J. and Rupp, W.D. (1997) EMBO J., 16, 880-888.
26. Freidberg, E.C., Walker, G.C. and Siede, W. (1995) DNA Repair and Mutagenesis. ASM Press, Washington, DC.
27. Gunz, D., Hess, M.T. and Naegeli, H. (1996) J. Biol. Chem., 271, 25089-25098.
28. Sugasawa, K., Ng, J.M., Masutani, C., Iwai, S., van der Spek, P.J., Eker, A.P., Hanaoka, F., Bootsma, D. and Hoeijmakers, J.H. (1998) Mol. Cell, 2, 223-232.
29. Hess, M.T., Schwitter, U., Petretta, M., Giese, B. and Naegeli, H. (1996) Chem. Biol., 3, 121-128.
30. Hess, M.T., Gunz, D. and Naegeli, H. (1996) Nucleic Acids Res., 24, 824-828.
31. Hess, M.T., Schwitter, U., Petretta, M., Giese, B. and Naegeli, H. (1997) Proc. Natl Acad. Sci. USA, 94, 6664-6669.
32. Mu, D., Hsu, D.S. and Sancar, A. (1996) J. Biol. Chem., 271, 8285-8294.
33. Mu, D., Tursun, M., Duckett, D.R., Drammond, J.T., Modrich, P. and Sancar, A. (1997) Mol. Cell. Biol., 17, 760-769.
34. Stos, M. (1998) J. Biol. Chem., 273, 10355.
35. Jayaraman, L., Moorthy, N.C., Murthy, K.G., Manley, J.L., Bustin, M. and Prives, C. (1998) Genes Dev., 12, 462-472.
36. Cleaver, J.E. and Layher, S.K. (1995) Cell, 80, 825-827.
37. Evans, E., Fellows, J., Coffer, A. and Wood, R.D. (1997) EMBO J., 16, 625-638.
38. Evans, E., Moggs, J.G., Hwang, J.R., Egly, J.M. and Wood, R.D. (1997) EMBO J., 16, 6559-6573.
39. Grove, A., Galeone, A., Mayol, L. and Geiduschek, E.P. (1996) J. Mol. Biol., 260, 120-125.
40. Grove, A., Galeone, A., Mayol, L. and Geiduschek, E.P. (1996) J. Mol. Biol., 260, 196-206.
41. Lapham, J., Rife, J.P., Moore, P.B. and Crothers, D.M. (1997) J. Biomol. NMR, 10, 255-262.
42. Huertas, M.L., Navarro, S., Lopez Martinez, M.C. and Garcia de la Torre, J. (1997) Biophys. J., 73, 3142-3153.
43. Garcia de la Torre, J., Navarro, S. and Lopez Martinez, M.C. (1994) Biophys. J., 66, 1573-1579.
44. Garcia De la Torre, J., Lopez Martinez, M.C. and Tirado, M.M. (1984) Macromolecules, 17, 2715-2722.
45. Garcia de la Torre, J., Lopez, M.C., Tirado, M.M. and Freire, J.J. (1983) Macromolecules, 16, 1121-1127.
46. Eimer, W., Williamson, J.R., Boxer, S.G. and Pecora, R. (1990) Biochemistry, 29, 799-811.
47. Eimer, W. and Pecora, R. (1991) J. Chem. Phys., 94, 2324-2329.
48. Small, E.W., Libertini, L.J. and Rudzki Small, J. (1988) Proc. SPIE-Int. Soc. Opt. Eng., 909, 97-107.
49. Fishman, D.M. and Patterson, G.D. (1996) Biopolymers, 38, 535-552.
50. Kahn, J.D., Yun, E. and Crothers, D.M. (1994) Nature, 368, 163-166.
51. Jerkovic, B., Kung, H.C. and Bolton, P.H. (1998) Anal. Biochem., 255, 90-94.
52. Kung, H.C. and Bolton, P.H. (1997) J. Biol. Chem., 272, 9227-9236.
53. Beger, R.D. and Bolton, P.H. (1998) J. Biol. Chem., 273, 15565-15573.
54. Wang, K.Y., Parker, S.A., Goljer, J. and Bolton, P.H. (1997) Biochemistry, 39, 11629-11639.
55. Tanner, J.E. (1970) J. Chem. Phys., 52, 2523-2526.
56. Acton, F.S. (1966) Analysis of Straight-Line Data. Dover, New York.
57. Kung, H.C., Wang, K.Y., Parker, S.A., Goljer, J. and Bolton, P.H. (1996) Magn. Reson. Chem., 34, S47-S54.
58. Goljer, J., Kumar, S. and Bolton, J.H. (1995) J. Biol. Chem., 270, 22980-22987.
59. McNulty, J.M., Jerkovic, B., Bolton, P.H. and Basu, A.K. (1998) Chem. Res. Toxicol., 11, 666-673.
60. Calladine, C.R. and Drew, H.R. (1996) J. Mol. Biol., 257, 479-485.
61. Harvey, S.C., Dlakic, M., Griffith, J., Harrington, R., Park, K., Sprous, D. and Zacharias, W. (1995) J. Biomol. Struct. Dyn., 13, 301-307.
62. Hagerman, P.J. (1990) Annu. Rev. Biochem., 59, 755-781.
63. Harrington, R.E. (1993) Electrophoresis, 14, 732-746.