메뉴 건너뛰기




Volumn 13, Issue 2, 2004, Pages 381-390

The folding landscape of Streptomyces griseus protease B reveals the energetic costs and benefits associated with evolving kinetic stability

Author keywords

Kinetic stability; Pro region; Protein evolution; Protein folding; Streptomyces griseus protease B

Indexed keywords

PROTEINASE; PROTEINASE B; UNCLASSIFIED DRUG;

EID: 1642493928     PISSN: 09618368     EISSN: None     Source Type: Journal    
DOI: 10.1110/ps.03336804     Document Type: Article
Times cited : (38)

References (30)
  • 1
    • 0033551199 scopus 로고    scopus 로고
    • α-Lylic protease precursor: Characterization of a structured folding intermediate
    • Anderson, D.E., Peters, R.J., Wilk, B., and Agard, D. 1999. α-Lylic protease precursor: Characterization of a structured folding intermediate. Biochemistry 38: 4728-4735.
    • (1999) Biochemistry , vol.38 , pp. 4728-4735
    • Anderson, D.E.1    Peters, R.J.2    Wilk, B.3    Agard, D.4
  • 2
    • 0031802121 scopus 로고    scopus 로고
    • Streptomyces griseus protease B: Secretion correlates with the length of the propeptide
    • Baardsnes, J., Sidhu, S., MacLeod, A., Elliott, J., Morden, D., Watson, J., and Borgford, T. 1998. Streptomyces griseus protease B: Secretion correlates with the length of the propeptide. J. Bacteriol. 180: 3241-3244.
    • (1998) J. Bacteriol. , vol.180 , pp. 3241-3244
    • Baardsnes, J.1    Sidhu, S.2    MacLeod, A.3    Elliott, J.4    Morden, D.5    Watson, J.6    Borgford, T.7
  • 3
    • 0026605509 scopus 로고
    • A protein-folding reaction under kinetic control
    • Baker, D., Sohl, J.L., and Agard, D.A. 1992. A protein-folding reaction under kinetic control. Nature 356: 263-265.
    • (1992) Nature , vol.356 , pp. 263-265
    • Baker, D.1    Sohl, J.L.2    Agard, D.A.3
  • 4
    • 0034151948 scopus 로고    scopus 로고
    • Sequence-specific 1H, 15N and 13C resonance assignments of the inhibitory prodomain of human furin
    • Bhattacharjya, S., Xu, P., and Ni, F. 2000. Sequence-specific 1H, 15N and 13C resonance assignments of the inhibitory prodomain of human furin. J. Biomol. NMR 16: 275-276.
    • (2000) J. Biomol. NMR , vol.16 , pp. 275-276
    • Bhattacharjya, S.1    Xu, P.2    Ni, F.3
  • 5
    • 0029645279 scopus 로고
    • Catalysis of a protein folding reaction: Mechanistic implications of the 2.0 Å structure of the subtilisin-prodomain complex
    • Bryan, P., Wang, L., Hoskins, J., Ruvinov, S., Strausberg, S., Alexander, P., Almog, O., Gilliland, G., and Gallagher, T. 1995. Catalysis of a protein folding reaction: Mechanistic implications of the 2.0 Å structure of the subtilisin-prodomain complex. Biochemistry 34: 10310-10318.
    • (1995) Biochemistry , vol.34 , pp. 10310-10318
    • Bryan, P.1    Wang, L.2    Hoskins, J.3    Ruvinov, S.4    Strausberg, S.5    Alexander, P.6    Almog, O.7    Gilliland, G.8    Gallagher, T.9
  • 6
    • 0036882399 scopus 로고    scopus 로고
    • Prodomains and protein folding catalysis
    • Bryan, P.N. 2002. Prodomains and protein folding catalysis. Chem. Rev. 102: 4805-4816.
    • (2002) Chem. Rev. , vol.102 , pp. 4805-4816
    • Bryan, P.N.1
  • 7
    • 0031571097 scopus 로고    scopus 로고
    • Touring the landscapes: Partially folded proteins examined by hydrogen exchange
    • Chamberlain, A.K. and Marqusee, S. 1997. Touring the landscapes: Partially folded proteins examined by hydrogen exchange. Structure 5: 859-863.
    • (1997) Structure , vol.5 , pp. 859-863
    • Chamberlain, A.K.1    Marqusee, S.2
  • 8
    • 0022446237 scopus 로고
    • Nucleotide sequence of the alkaline phosphatase gene of Escherichia coli
    • Chang, C.N., Kuang, W.J., and Chen, E.Y. 1986. Nucleotide sequence of the alkaline phosphatase gene of Escherichia coli. Gene 44: 121-125.
    • (1986) Gene , vol.44 , pp. 121-125
    • Chang, C.N.1    Kuang, W.J.2    Chen, E.Y.3
  • 9
    • 1642428604 scopus 로고    scopus 로고
    • Disabling the folding catalyst is the last critical step in α-lytic protease folding
    • this issue
    • Cunningham, E.L. and Agard, D.A. 2003. Disabling the folding catalyst is the last critical step in α-lytic protease folding. Protein Sci. (this issue)
    • (2003) Protein Sci.
    • Cunningham, E.L.1    Agard, D.A.2
  • 11
    • 0037118670 scopus 로고    scopus 로고
    • The pro region N-terminal domain provides specific interactions required for catalysis of α-lytic protease
    • Cunningham, E.L., Mau, T., Truhlar, S.M.E., and Agard, D.A. 2002. The pro region N-terminal domain provides specific interactions required for catalysis of α-lytic protease. Biochemistry 41: 8860-8867.
    • (2002) Biochemistry , vol.41 , pp. 8860-8867
    • Cunningham, E.L.1    Mau, T.2    Truhlar, S.M.E.3    Agard, D.A.4
  • 12
    • 0034021377 scopus 로고    scopus 로고
    • Two energetically disparate folding pathways of α-lytic protease share a single transition state
    • Derman, A.I. and Agard, D.A. 2000. Two energetically disparate folding pathways of α-lytic protease share a single transition state. Nat. Struct. Biol. 7: 394-397.
    • (2000) Nat. Struct. Biol. , vol.7 , pp. 394-397
    • Derman, A.I.1    Agard, D.A.2
  • 13
    • 0022819962 scopus 로고
    • Promoters of Escherichia coli: A hierarchy of in vivo strength indicates alternate structures
    • Dcuschle, U., Kammerer, W., Gentz, R., and Bujard, H. 1986. Promoters of Escherichia coli: A hierarchy of in vivo strength indicates alternate structures. EMBO J. 5: 2987-2994.
    • (1986) EMBO J. , vol.5 , pp. 2987-2994
    • Dcuschle, U.1    Kammerer, W.2    Gentz, R.3    Bujard, H.4
  • 16
    • 0035814889 scopus 로고    scopus 로고
    • Linked folding and anion binding of the Bacillus subtilis ribonuclease P protein
    • Henkels, C.H., Kurz, J.C., Fierke, C.A., and Oas, T.G. 2001. Linked folding and anion binding of the Bacillus subtilis ribonuclease P protein. Biochemistry 40: 2777-2789.
    • (2001) Biochemistry , vol.40 , pp. 2777-2789
    • Henkels, C.H.1    Kurz, J.C.2    Fierke, C.A.3    Oas, T.G.4
  • 17
    • 0032876680 scopus 로고    scopus 로고
    • Protein conformational stabilities can be determined from hydrogen exchange rates
    • Huyghues-Despointes, B.M., Scholtz, J.M., and Pace, C.N. 1999. Protein conformational stabilities can be determined from hydrogen exchange rates. Nat. Struct. Biol. 6: 910-912.
    • (1999) Nat. Struct. Biol. , vol.6 , pp. 910-912
    • Huyghues-Despointes, B.M.1    Scholtz, J.M.2    Pace, C.N.3
  • 19
    • 0037122769 scopus 로고    scopus 로고
    • Energetic landscape of α-lytic protease optimizes longevity through kinetic stability
    • Jaswal, S.S., Sohl, J.L., Davis, J.H., and Agard, D.A. 2002. Energetic landscape of α-lytic protease optimizes longevity through kinetic stability. Nature 415: 343-346.
    • (2002) Nature , vol.415 , pp. 343-346
    • Jaswal, S.S.1    Sohl, J.L.2    Davis, J.H.3    Agard, D.A.4
  • 20
    • 0344603844 scopus 로고    scopus 로고
    • The hydrogen exchange core and protein folding
    • Li, R. and Woodward. C. 1999. The hydrogen exchange core and protein folding. Protein Sci. 8: 1571-1590.
    • (1999) Protein Sci. , vol.8 , pp. 1571-1590
    • Li, R.1    Woodward, C.2
  • 21
    • 0029128015 scopus 로고
    • Functional linkage between the active site of α-lytic protease and distant regions of structure: Scanning alanine mutagenesis of a surface loop affects activity and substrate specificity
    • Mace, J.E., Wilk, B.J., and Agard, D.A. 1995. Functional linkage between the active site of α-lytic protease and distant regions of structure: Scanning alanine mutagenesis of a surface loop affects activity and substrate specificity. J. Mol. Biol. 251: 116-134.
    • (1995) J. Mol. Biol. , vol.251 , pp. 116-134
    • Mace, J.E.1    Wilk, B.J.2    Agard, D.A.3
  • 22
    • 0022555885 scopus 로고
    • Determination and analysis of urea and guanidine hydrochloride denaturation curves
    • Pace, C.N. 1986. Determination and analysis of urea and guanidine hydrochloride denaturation curves. Methods Enzymol. 131: 266-280.
    • (1986) Methods Enzymol. , vol.131 , pp. 266-280
    • Pace, C.N.1
  • 23
    • 0032169518 scopus 로고    scopus 로고
    • Pro region C-terminus: Protease active site interactions are critical in catalyzing the folding of α-lytic protease
    • Peters, R.J., Shiau, A.K., Sohl, J.L., Anderson, D.E., Tang, G., Silen, J.L., and Agard, D.A. 1998. Pro region C-terminus: Protease active site interactions are critical in catalyzing the folding of α-lytic protease. Biochemistry 37: 12058-12067.
    • (1998) Biochemistry , vol.37 , pp. 12058-12067
    • Peters, R.J.1    Shiau, A.K.2    Sohl, J.L.3    Anderson, D.E.4    Tang, G.5    Silen, J.L.6    Agard, D.A.7
  • 24
    • 0018820449 scopus 로고
    • Plasmids containing many tandem copies of a synthetic lactose operator
    • Sadler, J.R., Tecklenburg, M., and Betz, J.L. 1980. Plasmids containing many tandem copies of a synthetic lactose operator. Gene 8: 279-300.
    • (1980) Gene , vol.8 , pp. 279-300
    • Sadler, J.R.1    Tecklenburg, M.2    Betz, J.L.3
  • 25
    • 0031788058 scopus 로고    scopus 로고
    • Structure of α-lytic protease complexed with its pro region
    • Sauter, N.K., Mau, T., Rader, S.D., and Agard, D.A. 1998. Structure of α-lytic protease complexed with its pro region. Nat. Struct. Biol. 5: 945-950.
    • (1998) Nat. Struct. Biol. , vol.5 , pp. 945-950
    • Sauter, N.K.1    Mau, T.2    Rader, S.D.3    Agard, D.A.4
  • 26
    • 85044701334 scopus 로고    scopus 로고
    • Structure and functions of bacterial proteinase precursors
    • Serkina, A.V., Shevelev, A.B., and Chestukhina, G.G. 2001. Structure and functions of bacterial proteinase precursors. Bioorg. Khim. 27: 323-346.
    • (2001) Bioorg. Khim. , vol.27 , pp. 323-346
    • Serkina, A.V.1    Shevelev, A.B.2    Chestukhina, G.G.3
  • 27
    • 0028022483 scopus 로고
    • Streptomyces griseus protease C: A novel enzyme of the chymotrypsin superfamily
    • Sidhu, S.S., Kalmar, G.B., Willis, L.G., and Borgford, T.J. 1994. Streptomyces griseus protease C: A novel enzyme of the chymotrypsin superfamily. J. Biol. Chem. 269: 20167-20171.
    • (1994) J. Biol. Chem. , vol.269 , pp. 20167-20171
    • Sidhu, S.S.1    Kalmar, G.B.2    Willis, L.G.3    Borgford, T.J.4
  • 28
    • 0030907488 scopus 로고    scopus 로고
    • Inhibition of α-lytic protease by pro region C-terminal steric occlusion of the active site
    • Sohl, J.L., Shiau, A.K., Rader, S.D., Wilk, B.J., and Agard, D.A. 1997. Inhibition of α-lytic protease by pro region C-terminal steric occlusion of the active site. Biochemistry 36: 3894-3902.
    • (1997) Biochemistry , vol.36 , pp. 3894-3902
    • Sohl, J.L.1    Shiau, A.K.2    Rader, S.D.3    Wilk, B.J.4    Agard, D.A.5
  • 29
    • 0032558779 scopus 로고    scopus 로고
    • Unfolded conformations of α-lytic protease are more stable than its native state
    • Sohl, J.L., Jaswal, S.S., and Agard, D.A. 1998. Unfolded conformations of α-lytic protease are more stable than its native state. Nature 395: 817-819.
    • (1998) Nature , vol.395 , pp. 817-819
    • Sohl, J.L.1    Jaswal, S.S.2    Agard, D.A.3
  • 30
    • 0030904228 scopus 로고    scopus 로고
    • The role of the Cys191-Cys220 disulfide bond in trypsin: New targets for engineering substrate specificity
    • Wang, E.C., Hung, S.H., Cahoon, M., and Hedstrom, L. 1997. The role of the Cys191-Cys220 disulfide bond in trypsin: New targets for engineering substrate specificity. Protein Eng. 10: 405-411.
    • (1997) Protein Eng. , vol.10 , pp. 405-411
    • Wang, E.C.1    Hung, S.H.2    Cahoon, M.3    Hedstrom, L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.