Bacterial mitotic machineries

Cell

Volumn 116, Issue 3, 2004, Pages 359-366

  Gerdes, Kenn ^a   Møller Jensen, Jakob ^a,b   Ebersbach, Gitte ^a   Kruse, Thomas ^a   Nordström, Kurt ^c  

^a UNIVERSITY OF SOUTHERN DENMARK   (Denmark)

^b MRC LABORATORY OF MOLECULAR BIOLOGY   (United Kingdom)

^c UPPSALA UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATASE; BACTERIAL PROTEIN; F ACTIN; ISOPROTEIN; PLASMID DNA;

ACTIN FILAMENT; BACTERIAL CELL; BACTERIAL CHROMOSOME; CELL DIVISION; CENTROMERE; CHROMOSOME SEGREGATION; EUKARYOTE; FORCE; GENE LOCUS; GENETIC CODE; LABORATORY; MITOSIS; MOLECULAR DYNAMICS; NONHUMAN; PLASMID; PRIORITY JOURNAL; PROKARYOTE; REVIEW; SEQUENCE HOMOLOGY;

BACTERIA (MICROORGANISMS); EUKARYOTA; PROKARYOTA;

EID: 1642313812     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0092-8674(04)00116-3     Document Type: Review

References (92)

1. Austin S., Nordström K. Partition-mediated incompatibility of bacterial plasmids. Cell. 60:1990;351-354.
2. Ben Yehuda S., Rudner D.Z., Losick R. RacA, a bacterial protein that anchors chromosomes to the cell poles. Science. 299:2003;532-536.
3. Bork P., Sander C., Valencia A. An ATPase domain common to prokaryotic cell cycle proteins, sugar kinases, actin, and hsp70 heat shock proteins. Proc. Natl. Acad. Sci. USA. 89:1992;7290-7294.
4. Breuner A., Jensen R.B., Dam M., Pedersen S., Gerdes K. The centromere-like parC locus of plasmid R1. Mol. Microbiol. 20:1996;581-592.
5. Britton R.A., Lin D.C., Grossman A.D. Characterization of a prokaryotic SMC protein involved in chromosome partitioning. Genes Dev. 12:1998;1254-1259.
6. Carballido-Lopez R., Errington J. The bacterial cytoskeleton. in vivo dynamics of the actin-like protein Mbl of Bacillus subtilis Dev. Cell. 4:2003;19-28.
7. Dam M., Gerdes K. Partitioning of plasmid R1. Ten direct repeats flanking the parA promoter constitute a centromere-like partition site parC, that expresses incompatibility. J. Mol. Biol. 236:1994;1289-1298.
8. Daniel R.A., Errington J. Control of cell morphogenesis in bacteria. two distinct ways to make a rod-shaped cell Cell. 113:2003;767-776.
9. Dasgupta S., Maisnier-Patin S., Nordström K. New genes with old modus operandi. The connection between supercoiling and partitioning of DNA in Escherichia coli. EMBO Rep. 1:2000;323-327.
10. Davis M.A., Austin S.J. Recognition of the P1 plasmid centromere analog involves binding of the ParB protein and is modified by a specific host factor. EMBO J. 7:1988;1881-1888.
11. Dickinson R.B., Purich D.L. Clamped-filament elongation model for actin-based motors. Biophys. J. 82:2002;605-617.
12. Easter J. Jr., Gober J.W. ParB-stimulated nucleotide exchange regulates a switch in functionally distinct ParA activities. Mol. Cell. 10:2002;427-434.
13. Ebersbach G., Gerdes K. The double par locus of virulence factor pB171. DNA segregation is correlated with oscillation of ParA Proc. Natl. Acad. Sci. USA. 98:2001;15078-15083.
14. Edgar R., Chattoraj D.K., Yarmolinsky M. Pairing of P1 plasmid partition sites by ParB. Mol. Microbiol. 42:2001;1363-1370.
15. Erdmann N., Petroff T., Funnell B.E. Intracellular localization of P1 ParB protein depends on ParA and parS. Proc. Natl. Acad. Sci. USA. 96:1999;14905-14910.
16. Errington J., Bath J., Wu L.J. DNA transport in bacteria. Nat. Rev. Mol. Cell Biol. 2:2001;538-545.
17. Errington J., Daniel R.A., Scheffers D.J. Cytokinesis in bacteria. Microbiol. Mol. Biol. Rev. 67:2003;52-65.
18. Espeli O., Levine C., Hassing H., Marians K.J. Temporal regulation of topoisomerase IV activity in E. coli. Mol. Cell. 11:2003;189-201. a.
19. Espeli O., Nurse P., Levine C., Lee C., Marians K.J. SetB. an integral membrane protein that affects chromosome segregation in Escherichia coli Mol. Microbiol. 50:2003;495-509. b.
20. Funnell B.E. Mini-P1 plasmid partitioning. excess ParB protein destabilizes plasmids containing the centromere parS J. Bacteriol. 170:1988;954-960.
21. Gerdes K., Møller-Jensen J., Jensen R.B. Plasmid and chromosome partitioning. surprises from phylogeny Mol. Microbiol. 37:2000;455-466.
22. Glaser P., Sharpe M.E., Raether B., Perego M., Ohlsen K., Errington J. Dynamic, mitotic-like behavior of a bacterial protein required for accurate chromosome partitioning. Genes Dev. 11:1997;1160-1168.
23. Godfrin-Estevenon A.M., Pasta F., Lane D. The parAB gene products of Pseudomonas putida exhibit partition activity in both P. putida and Escherichia coli. Mol. Microbiol. 43:2002;39-49.
24. Gordon G.S., Sitnikov D., Webb C.D., Teleman A., Straight A., Losick R., Murray A.W., Wright A. Chromosome and low copy plasmid segregation in E. coli. visual evidence for distinct mechanisms Cell. 90:1997;1113-1121.
25. Gordon G.S., Shivers R.P., Wright A. Polar localization of the Escherichia coli oriC region is independent of the site of replication initiation. Mol. Microbiol. 44:2002;501-507.
26. Graumann P.L. SMC proteins in bacteria. condensation motors for chromosome segregation? Biochimie. 83:2001;53-59.
27. Hao J.J., Yarmolinsky M. Effects of the P1 plasmid centromere on expression of P1 partition genes. J. Bacteriol. 184:2002;4857-4867.
28. Hiraga S., Niki H., Ogura T., Ichinose C., Mori H., Ezaki B., Jaffe A. Chromosome partitioning in Escherichia coli. novel mutants producing anucleate cells J. Bacteriol. 171:1989;1496-1505.
29. Ho T.Q., Zhong Z., Aung S., Pogliano J. Compatible bacterial plasmids are targeted to independent cellular locations in Escherichia coli. EMBO J. 21:2002;1864-1872.
30. Holmes V.F., Cozzarelli N.R. Closing the ring. links between SMC proteins and chromosome partitioning, condensation, and supercoiling Proc. Natl. Acad. Sci. USA. 97:2000;1322-1324.
31. Ireton K., Gunther N.W., Grossman A.D. spo0J is required for normal chromosome segregation as well as the initiation of sporulation in Bacillus subtilis. J. Bacteriol. 176:1994;5320-5329.
32. Jacob F., Brenner S., Cuzin F. On the regulation of DNA replication in bacteria. Cold Spring Harb. Symp. Quant. Biol. 23:1963;329-348.
33. Jensen R.B., Gerdes K. Partitioning of plasmid R1. The ParM protein exhibits ATPase activity and interacts with the centromere-like ParR-parC complex. J. Mol. Biol. 269:1997;505-513.
34. Jensen R.B., Gerdes K. Mechanism of DNA segregation in prokaryotes. ParM partitioning protein of plasmid R1 co-localizes with its replicon during the cell cycle EMBO J. 18:1999;4076-4084.
35. Jensen R.B., Shapiro L. The Caulobacter crescentus smc gene is required for cell cycle progression and chromosome segregation. Proc. Natl. Acad. Sci. USA. 96:1999;10661-10666.
36. Jensen R.B., Lurz R., Gerdes K. Mechanism of DNA segregation in prokaryotes. replicon pairing by parC of plasmid R1 Proc. Natl. Acad. Sci. USA. 95:1998;8550-8555.
37. Jensen R.B., Wang S.C., Shapiro L. Dynamic localization of proteins and DNA during a bacterial cell cycle. Nat. Rev. Mol. Cell Biol. 3:2002;167-176.
38. Jones L.J., Carballido-Lopez R., Errington J. Control of cell shape in bacteria. helical, actin-like filaments in Bacillus subtilis Cell. 104:2001;913-922.
39. Kabsch W., Holmes K.C. The actin fold. FASEB J. 9:1995;167-174.
40. Kadoya R., Hassan A.K., Kasahara Y., Ogasawara N., Moriya S. Two separate DNA sequences within oriC participate in accurate chromosome segregation in Bacillus subtilis. Mol. Microbiol. 45:2002;73-87.
41. Kim S.K., Wang J.C. Localization of F plasmid SopB protein to positions near the poles of Escherichia coli cells. Proc. Natl. Acad. Sci. USA. 95:1998;1523-1527.
42. Kim S.K., Wang J.C. Gene silencing via protein-mediated subcellular localization of DNA. Proc. Natl. Acad. Sci. USA. 96:1999;8557-8561.
43. Kim H.J., Calcutt M.J., Schmidt F.J., Chater K.F. Partitioning of the linear chromosome during sporulation of Streptomyces coelicolor A3(2) involves an oriC-linked parAB locus. J. Bacteriol. 182:2000;1313-1320.
44. Koonin E.V. A superfamily of ATPases with diverse functions containing either classical or deviant ATP-binding motif. J. Mol. Biol. 229:1993;1165-1174.
45. Koppes L.J., Woldringh C.L., Nanninga N. Escherichia coli contains a DNA replication compartment in the cell center. Biochimie. 81:1999;803-810.
46. Kruse T., Møller-Jensen J., Løbner-Olesen A., Gerdes K. Dysfunctional MreB inhibits chromosome segregation in Escherichia coli. EMBO J. 22:2003;5283-5292.
47. Lau I.F., Filipe S.R., Soballe B., Okstad O.A., Barre F.X., Sherratt D.J. Spatial and temporal organization of replicating Escherichia coli chromosomes. Mol. Microbiol. 49:2003;731-743.
48. Lee P.S., Lin D.C., Moriya S., Grossman A.D. Effects of the chromosome partitioning protein Spo0J (ParB) on oriC positioning and replication initiation in Bacillus subtilis. J. Bacteriol. 185:2003;1326-1337.
49. Lemon K.P., Grossman A.D. Localization of bacterial DNA polymerase. evidence for a factory model of replication Science. 282:1998;1516-1519.
50. Lemon K.P., Grossman A.D. The extrusion-capture model for chromosome partitioning in bacteria. Genes Dev. 15:2001;2031-2041.
51. Lewis P.J., Errington J. Direct evidence for active segregation of oriC regions of the Bacillus subtilis chromosome and co-localization with the SpoOJ partitioning protein. Mol. Microbiol. 25:1997;945-954.
52. Lewis R.A., Bignell C.R., Zeng W., Jones A.C., Thomas C.M. Chromosome loss from par mutants of Pseudomonas putida depends on growth medium and phase of growth. Microbiol. 148:2002;537-548.
53. Li Y., Austin S. The P1 plasmid in action. time-lapse photomicroscopy reveals some unexpected aspects of plasmid partition Plasmid. 48:2002;174-178.
54. Li Y., Sergueev K., Austin S. The segregation of the Escherichia coli origin and terminus of replication. Mol. Microbiol. 46:2002;985-996.
55. Lin D.C., Grossman A.D. Identification and characterization of a bacterial chromosome partitioning site. Cell. 92:1998;675-685.
56. Lin D.C.H., Levin P.A., Grossman A.D. Bipolar localization of a chromosome partition protein in Bacillus subtilis. Proc. Natl. Acad. Sci. USA. 94:1997;4721-4726.
57. Lutkenhaus J. Dynamic proteins in bacteria. Curr. Opin. Microbiol. 5:2002;548-552.
58. Marston A.L., Errington J. Dynamic movement of the ParA-like Soj protein of B. subtilis and its dual role in nucleoid organization and developmental regulation. Mol. Cell. 4:1999;673-682.
59. Mohl D.A., Gober J.W. Cell cycle-dependent polar localization of chromosome partitioning proteins in Caulobacter crescentus. Cell. 88:1997;675-684.
60. Mohl D.A., Easter J. Jr., Gober J.W. The chromosome partitioning protein, ParB, is required for cytokinesis in Caulobacter crescentus. Mol. Microbiol. 42:2001;741-755.
61. Møller-Jensen J., Jensen R.B., Löwe J., Gerdes K. Prokaryotic DNA segregation by an actin-like filament. EMBO J. 21:2002;3119-3127.
62. Møller-Jensen J., Borch J., Dam M., Roepstortt P., Gerdes K. Bacterial mitosis. ParM of plasmid R1 moves plasmid DNA by an actin-like insertional polymerization mechanism Mol. Cell. 12:2003;1477-1487.
63. Mori H., Mori Y., Ichinose C., Niki H., Ogura T., Kato A., Hiraga S. Purification and characterization of SopA and SopB proteins essential for F plasmid partitioning. J. Biol. Chem. 264:1989;15535-15541.
64. Niki H., Hiraga S. Subcellular distribution of actively partitioning F plasmid during the cell division cycle in E. coli. Cell. 90:1997;951-957.
65. Niki H., Hiraga S. Polar localization of the replication origin and terminus in Escherichia coli nucleoids during chromosome partitioning. Genes Dev. 12:1998;1036-1045.
66. Niki H., Hiraga S. Subcellular localization of plasmids containing the oriC region of the Escherichia coli chromosome, with or without the sopABC partitioning system. Mol. Microbiol. 34:1999;498-503.
67. Niki H., Imamura R., Kitaoka M., Yamanaka K., Ogura T., Hiraga S. E. coli MukB protein involved in chromosome partition forms a homodimer with a rod-and-hinge structure having DNA binding and ATP/GTP binding activities. EMBO J. 11:1992;5101-5109.
68. Niki H., Yamaichi Y., Hiraga S. Dynamic organization of chromosomal DNA in Escherichia coli. Genes Dev. 14:2000;212-223.
69. Nordström K., Austin S.J. Mechanisms that contribute to the stable segregation of plasmids. Annu. Rev. Genet. 23:1989;37-69.
70. Norris V. Hypothesis. chromosome separation in Escherichia coli involves autocatalytic gene expression, transertion and membrane-domain formation Mol. Microbiol. 16:1995;1051-1057.
71. Onogi T., Miki T., Hiraga S. Behavior of sister copies of mini-F plasmid after synchronized plasmid replication in Escherichia coli cells. J. Bacteriol. 184:2002;3142-3145.
72. Pantaloni D., Le Clainche C., Carlier M.F. Mechanism of actin-based motility. Science. 292:2001;1502-1506.
73. Quisel J.D., Lin D.C., Grossman A.D. Control of development by altered localization of a transcription factor in B. subtilis. Mol. Cell. 4:1999;665-672.
74. Rodionov O., Lobocka M., Yarmolinsky M. Silencing of genes flanking the P1 plasmid centromere. Science. 283:1999;546-549.
75. Roos M., van Geel A.B., Aarsman M.E., Veuskens J.T., Woldringh C.L., Nanninga N. Cellular localization of oriC during the cell cycle of Escherichia coli as analyzed by fluorescent in situ hybridization. Biochimie. 81:1999;797-802.
76. Sawitzke J.A., Austin S. Suppression of chromosome segregation defects of Escherichia coli muk mutants by mutations in topoisomerase I. Proc. Natl. Acad. Sci. USA. 97:2000;1671-1676.
77. Sawitzke J., Austin S. An analysis of the factory model for chromosome replication and segregation in bacteria. Mol. Microbiol. 40:2001;786-794.
78. Sharpe M.E., Errington J. A fixed distance for separation of newly replicated copies of oriC in Bacillus subtilis. implications for co-ordination of chromosome segregation and cell division Mol. Microbiol. 28:1998;981-990.
79. Sherratt D.J. Bacterial chromosome dynamics. Science. 301:2003;780-785.
80. Shih Y.L., Le T., Rothfield L. Division site selection in Escherichia coli involves dynamic redistribution of Min proteins within coiled structures that extend between the two cell poles. Proc. Natl. Acad. Sci. USA. 100:2003;7865-7870.
81. Soufo H.J., Graumann P.L. Actin-like proteins MreB and Mbl from Bacillus subtilis are required for bipolar positioning of replication origins. Curr. Biol. 13:2003;1916-1920.
82. Teleman A.A., Graumann P.L., Lin D.C.H., Grossman A.D., Losick R. Chromosome arrangement within a bacterium. Curr. Biol. 8:1998;1102-1109.
83. van den Ent F., Amos L.A., Löwe J. Prokaryotic origin of the actin cytoskeleton. Nature. 413:2001;39-44.
84. van den Ent F., Møller-Jensen J., Amos L.A., Gerdes K., Löwe J. F-actin-like filaments formed by plasmid segregation protein ParM. EMBO J. 21:2002;6935-6943.
85. Watanabe E., Inamoto S., Lee M.H., Kim S.U., Ogua T., Mori H., Hiraga S., Yamasaki M., Nagai K. Purification and characterization of the sopB gene product which is responsible for stable maintenance of mini-F plasmid. Mol. Gen. Genet. 218:1989;431-436.
86. Webb C.D., Teleman A., Gordon S., Straight A., Belmont A., Lin D.C., Grossman A.D., Wright A., Losick R. Bipolar localization of the replication origin regions of chromosomes in vegetative and sporulating cells of B. subtilis. Cell. 88:1997;667-674.
87. Webb C.D., Graumann P.L., Kahana J.A., Teleman A.A., Silver P.A., Losick R. Use of time-lapse microscopy to visualize rapid movement of the replication origin region of the chromosome during the cell cycle in Bacillus subtilis. Mol. Microbiol. 28:1998;883-892.
88. Weitao T., Nordström K., Dasgupta S. Mutual suppression of mukB and seqA phenotypes might arise from their opposing influences on the Escherichia coli nucleoid structure. Mol. Microbiol. 34:1999;157-168.
89. Woldringh C.L. The role of co-transcriptional translation and protein translocation (transertion) in bacterial chromosome segregation. Mol. Microbiol. 45:2002;17-29.
90. Wu L.J., Errington J. RacA and the Soj-Spo0J system combine to effect polar chromosome segregation in sporulating Bacillus subtilis. Mol. Microbiol. 49:2003;1463-1475.
91. Yamaichi Y., Niki H. Active segregation by the Bacillus subtilis partitioning system in Escherichia coli. Proc. Natl. Acad. Sci. USA. 97:2000;14656-14661.
92. Yates P., Lane D., Biek D.P. The F plasmid centromere, sopC, is required for full repression of the sopAB operon. J. Mol. Biol. 290:1999;627-638.