Rangewide phylogeography of a terrestrial slug in Europe: Evidence for Alpine refugia and rapid colonization after the Pleistocene glaciations

Molecular Ecology

Volumn 14, Issue 4, 2005, Pages 1133-1150

  Pinceel, Jan ^a   Jordaens, Kurt ^a   Pfenninger, Markus ^c   Backeljau, Thierry ^a,b  

^a UNIVERSITY OF ANTWERP   (Belgium)

^b ROYAL BELGIAN INSTITUTE OF NATURAL SCIENCES   (Belgium)

^c GOETHE UNIVERSITY   (Germany)

Author keywords

Allozymes; Arion fuscus; Europe; Gastropoda; Glacial refugia; mtDNA; Phylogeography

Indexed keywords

ENZYME; MITOCHONDRIAL DNA;

ANIMAL; ARTICLE; COMPARATIVE STUDY; DNA SEQUENCE; EUROPE; GENETIC VARIABILITY; GENETICS; GEOGRAPHY; HAPLOTYPE; ICE COVER; MOLLUSC; PHYLOGENY; SINGLE STRAND CONFORMATION POLYMORPHISM;

ANIMALS; DNA, MITOCHONDRIAL; ENZYMES; EUROPE; GEOGRAPHY; HAPLOTYPES; ICE COVER; MOLLUSCA; PHYLOGENY; POLYMORPHISM, SINGLE-STRANDED CONFORMATIONAL; SEQUENCE ANALYSIS, DNA; VARIATION (GENETICS);

EID: 16344390368     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2005.02479.x     Document Type: Article

References (89)

1. Abdo Z, Crandall KA, Joyce P (2004) Evaluating the performance of likelihood methods for detecting population structure and migration. Molecular Ecology, 13, 837-851.
2. Andersen J (1982) New data on the terrestrial gastropods of northern Nordland and Troms counties, N. Norway. Fauna Norvegica Series A, 3, 37-40.
3. Andersen J, Halvorsen O (1984) Species composition, abundance, habitat requirements and regional distribution of terrestrial gastropods in Arctic Norway. Polar Biology, 3, 45-53.
4. Arnaud JF, Madec L, Guiller A, Bellido A (2001) Spatial analysis of allozyme and microsatellite DNA polymorphisms in the land snail Helix aspersa (Gastropoda: Helicidae). Molecular Ecology, 10, 1563-1576.
5. Arnaud JF, Madec L, Guiller A, Deunff J (2003) Population genetic structure in a human-disturbed environment: a case study in the land snail Helix aspersa (Gastropoda: Pulmonata). Heredity, 90, 451-458.
6. Backeljau T, Winnepenninckx B, Jordaens K et al. (1996) Protein electrophoresis in arionid taxonomy. BCPC Symposium Proceedings, 66, 21-28.
7. Backeljau T, Ahmadyar SZ, Selens M, Van Rompaey J, Verheyen W (1987) Comparative electrophoretic analyses of three European Carinarion species (Mollusca, Pulmonata, Arionidae). Zoologica Scripta, 16, 209-222.
8. Baur A, Baur B (1988) Individual movement patterns of the minute land snail Punctum pygmaeum (Draparnaud) (Pulmonata, Endodontidae). Veliger, 30, 372-376.
9. Beerli P, Felsenstein J (1999) Maximum-likelihood estimation of migration rates and effective population numbers in two populations using a coalescent approach. Genetics, 152, 763-773.
10. Beerli P, Felsenstein J (2001) Maximum-likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proceedings of the National Academy of Sciences of the United States of America, 98, 4563-4568.
11. Bilton DT, Mirol PM, Maschereti S, Fredga K, Zima J, Searle JB (1998) Mediterranean Europe as an area of endemism for small mammals rather than a source for northwards postglacial colonization. Proceedings of the Royal Society of London. Series B, Biological Sciences, 265, 1219-1226.
12. Chiba S (1999) Accelerated evolution of land snails Mandarina in the oceanic Bonin Islands: evidence from mitochondrial DNA sequences. Evolution, 53, 460-471.
13. Chichester LF, Getz LL (1969) The zoogeography and ecology of arionid and limacid slugs introduced into northeastern North America. Malacologia, 7, 313-346.
14. Clement M, Posada D, Crandall KA (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657-1659.
15. Davison A (2000) An east-west distribution of divergent mitochondrial haplotypes in British populations of the landsnail, Cepaea nemoralis (Pulmonata). Biological Journal of the Linnean Society, 70, 697-706.
16. Davison A (2002) Land snails as a model to understand the role of history and selection in the origins of biodiversity. Population Ecology, 44, 129-136.
17. Davison A, Clarke B (2000) History or current selection? A molecular analysis of 'area effects' in the land snail Cepaea nemoralis. Proceedings of the Royal Society of London. Series B, Biological Sciences, 267, 1-8.
18. Douris V, Cameron RAD, Rodakis GC, Lecanidou R (1998) Mitochondrial phylogeography of the land snail Albinaria in Crete: long-term geological and short-term vicariance effects. Evolution, 52, 116-125.
19. Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131, 479-491.
20. Falkner G, Bank RA, Von Proschwitz T (2001) Checklist of the nonmarine molluscan species-group taxa of the states of northern, Atlantic and central Europe (CLECOM I). Heldia, 4, 1-76.
21. Fedorov VB, Stenseth NC (2001) Glacial survival of the Norwegian lemming (Lemmus lemmus) in Scandinavia: inference from mitochondrial DNA variation. Proceedings of the Royal Society of London. Series B, Biological Sciences, 268, 809-814.
22. Garrido C, Castillejo J, Iglesias J (1995) The Arion subfuscus complex in the eastern part of the Iberian Peninsula, with redescription of Arion subfuscus (Draparnaud 1805) (Gastropoda: Pulmonata: Arionidae). Archiv für Molluskenkunde, 124, 103-118.
23. Gittenberger E, Piel WH, Groenenberg DSJ (2004) The Pleistocene glaciations and the evolutionary history of the polytypic snail species Arianta arbustorum (Gastropoda, Pulmonata, Helicidae). Molecular Phylogenetics and Evolution, 30, 64-73.
24. Goodacre SL (2002) Population structure, history and gene flow in a group of closely related land snails: generic variation in Partula from the Society Islands of the Pacific. Molecular Ecology, 11, 55-68.
25. Haase M, Misof B, Wirth T, Baminger H, Baur B (2003) Mitochondrial differentiation in a polymorphic land snail: evidence for Pleistocene survival within the boundaries of permafrost. Journal of Evolutionary Biology, 16, 415-428.
26. Hänfling B, Hellemans B, Volckaert FAM, Carvalho GR (2002) Late glacial history of the cold-adapted freshwater fish Cottus gobio, revealed by microsatellites. Molecular Ecology, 11, 1717-1729.
27. Harris H, Hopkinson DA (1976) Handbook of Enzyme Electrophoresis in Human Genetics. North Holland Publishing Co, Oxford.
28. Hausdorf B, Hennig C (2003) Nestedness of northwest European land snail ranges as a consequence of differential immigration from Pleistocene glacial refuges. Oecologia, 135, 102-109.
29. Hausdorf B, Hennig C (2004) Does vicariance shape biotas? Biogeographical tests of the vicariance model in the north-west European land snail fauna. Journal of Biogeography, 31, 1751-1757.
30. Hayashi M, Chiba S (2000) Intraspecific diversity of mitochondrial DNA in the land snail Euhadra peliomphala (Bradybaenidae). Biological Journal of the Linnean Society, 70, 391-401.
31. Hewitt GM (1996) Some genetic consequences of ice ages, and their role in divergence and speciation. Biological Journal of the Linnean Society, 58, 247-276.
32. Hewitt GM (1999) Postglacial recolonization of European biota. Biological Journal of the Linnean Society, 68, 87-112.
33. Hewitt GM (2000) The genetic legacy of the Quaternary ice ages. Nature, 405, 907-913.
34. Hewitt GM (2001) Speciation, hybrid zones and phylogeography - or seeing genes in space and time. Molecular Ecology, 10, 537-549.
35. Hewitt GM (2004) Genetic consequences of climatic oscillations in the Quaternary. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, 359, 183-195.
36. Ibrahim KM, Nichols RA, Hewitt GM (1996) Spatial patterns of genetic variation generated by different forms of dispersal during range expansion. Heredity, 77, 282-291.
37. Kadereit JW, Griebeler EM, Comes HP (2004) Quaternary diversification in European Alpine plants: pattern and process. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, 359, 265-274.
38. Kerney MP, Cameron RAD (1979) A Field Guide to the Land Snails of Britain and North-West Europe. William Collins Sons & Co Ltd, London/Glasgow.
39. Knowles LL (2004) The burgeoning field of statistical phylogeography. Journal of Evolutionary Biology, 17, 1-10.
40. Knowles LL, Maddison WP (2002) Statistical phylogeography. Molecular Ecology, 11, 2623-2635.
41. Kornyushin AV (1986) New data on geographic and biotopic distribution of terrestrial molluscs in the Kola Peninsula. Zoologicheskiy Zhurnal, 65, 453-456.
42. Kumar S, Tamura K, Jakobsen IB, Nei M (2001) MEGA2: molecular evolutionary genetics analysis software. Bioinformatics, 17, 1244-1245.
43. Lagercrantz U, Ryman N (1990) Genetic structure of Norway spruce (Picea abies): concordance of morphological and allozymic variation. Evolution, 44, 38-53.
44. Lecanidou R, Douris V, Rodakis GC (1994) Novel features of metazoan mtDNA revealed from sequence analysis of three mitochondrial DNA segments of the land snail Albinaria turrita (Gastropoda: Clausiliidae). Journal of Molecular Evolution, 38, 369-382.
45. Lupu D (1974) La révision des représentants de la famille des Arionidae (Gastropoda Pulmonata) de Roumanie. Extraits de Travaux Du Muséum d'Histoire Naturelle 'Grigore Antipa', 15, 31-44.
46. Manganelli G, Bodon M, Favilli L, Giusti F (1995) Gastropoda Pulmonata. In : Checklist Delle Specie Della Fauna Italiana (Minelli A, Ruffo S, La Posta S eds). Edizione Calderini, Bologna.
47. Murray J, Stine C, Johnson MS (1991) The evolution of mitochondrial DNA in Partula. Heredity, 66, 93-104.
48. Petit RJ, Grivet D (2002) Optimal randomization strategies when testing the existence of a phylogeographic structure. Genetics, 161, 469-471.
49. Pfenninger M (2004) Comparative analysis of range sizes in Helicidae s.l. (Pulmonata, Gastropoda). Evolutionary Ecology Research, 6, 359-376.
50. Pfenninger M, Posada D (2002) Phylogeographic history of the land snail Candidula unifasciata (Helicellinae, Stylommatophora): fragmentation, corridor migration, and secondary contact. Evolution, 56, 1776-1788.
51. Pfenninger M, Bahl A, Streit B (1996) Isolation by distance in a population of a small land snail Trochoidea geyeri: evidence from direct and indirect methods. Proceedings of the Royal Society of London. Series B, Biological Sciences, 263, 1211-1217.
52. Pfenninger M, Posada D, Magnin F (2003) Evidence for survival of Pleistocene climatic changes in Northern refugia by the land snail Trochoidea geyeri (Soos 1926) (Helicellinae, Stylommatophora). BMC Evolutionary Biology, 3, 8.
53. Pfleger V, Chatfield J (1988) A Guide to the Snails of Britain and Europe. Hamlyn Publishing Group Ltd, London.
54. Pinceel J, Jordaens K, Van Houtte N, De Winter AJ, Backeljau T (2004) Molecular and morphological data reveal cryptic taxonomic diversity in the terrestrial slug complex Arion subfuscus/ fuscus (Mollusca, Pulmonata, Arionidae) in continental north-west Europe. Biological Journal of the Linnean Society, 83, 23-38.
55. Posada D, Crandall KA (2001) Intraspecific gene genealogies: trees grafting into networks. Trends in Ecology and Evolution, 16, 37-44.
56. Posada D, Crandall KA, Templeton AR (2000) GEODIS: a program for the cladistic nested analysis of the geographical distribution of genetic haplotypes. Molecular Ecology, 9, 487-488.
57. Raymond M, Rousset F (1995) GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. Journal of Heredity, 86, 248-249.
58. Rice WR (1989) Analyzing tables of statistical tests. Evolution, 43, 223-225.
59. Rozas J, Sanchez-DelBarrio JC, Messeguer X, Rozas R (2003) DNASP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics, 19, 2496-2497.
60. Schmidt HA, Strimmer K, Vingron M, Von Haeseler A (2002) TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatks, 18, 502-504.
61. Schneider S, Roessli D, Excoffier L (2000) ARLEQUIN: a software for population genetics data analysis, Version 2.000. Genetics and Biometry Laboratory, Department of Anthropology, University of Geneva, Switzerland.
62. Schönswetter P, Tribsch A, Niklfeld H (2003b) Phylogeography of the high Alpine cushion plant Androsace alpina (Primulaceae) in the European Alps. Plant Biology, 5, 623-630.
63. Schönswetter P, Paun O, Tribsch A, Niklfeld H (2003a) Out of the Alps: colonization of northern Europe by East Alpine populations of the glacier buttercup Ranunculus glacialis L. (Ranunculaceae). Molecular Ecology, 12, 3373-3381.
64. Schönswetter P, Tribsch A, Stehlik I, Niklfeld H (2004) Glacial history of high Alpine Ranunculus glacialis (Ranunculaceae) in the European Alps in a comparative phylogeographical context. Biological Journal of the Linnean Society, 81, 183-195.
65. Silvola T (1964) On the land molluscs of the Kevojoki River valley in Finnish Lapland. Annals of the University of Turku, A, II (Reports of the Kevo Subarctic Station), 32, 250-268.
66. Stewart JR, Lister AM (2001) Cryptic northern refugia and the origins of the modern biota. Trends in Ecology and Evolution, 16, 608-613.
67. Strimmer K, Von Haeseler A (1997) Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment. Proceedings of the National Academy of Sciences of the United States of America, 94, 6815-6819.
68. Taberlet P, Fumagalli L, Wust-Saucy AG, Cosson JF (1998) Comparative phylogeography and postglacial colonization routes in Europe. Molecular Ecology, 7, 453-464.
69. Templeton AR (1998) Nested clade analyses of phylogeographic data: testing hypotheses about gene flow and population history. Molecular Ecology, 7, 381-397.
70. Templeton AR (2002) 'Optimal' randomization strategies when testing the existence of a phylogeographic structure: a reply to Petit and Grivet. Genetics, 161, 473-475.
71. Templeton AR (2004) Statistical phylogeography: methods of evaluating and minimizing inference errors. Molecular Ecology, 13, 789-809.
72. Templeton AR, Sing CF (1993) A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination. Genetics, 134, 659-669.
73. Templeton AR, Boerwinkle E, Sing CF (1987) A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. I. Basic theory and an analysis of alcohol dehydrogenase activity in Drosophila. Genetics, 117, 343-351.
74. Templeton AR, Routman E, Phillips CA (1995) Separating population structure from population history: a cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum. Genetics, 140, 767-782.
75. Thomaz D, Guiller A, Clarke B (1996) Extreme divergence of mitochondrial DNA within species of pulmonate land snails. Proceedings of the Royal Society of London. Series B, Biological Sciences, 263, 363-368.
76. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 24, 4876-4882.
77. Tribsch A (2004) Areas of endemism of vascular plants in the Eastern Alps in relation to Pleistocene glaciation. Journal of Biogeognphy, 31, 747-760.
78. Tribsch A, Schönswetter P (2003) Patterns of endemism and comparative phylogeography confirm palaeoenvironmental evidence for Pleistocene refugia in the Eastern Alps. Taxon, 52, 477-497.
79. Volckaert FAM, Hänfling B, Hellemans B, Carvalho GR (2002) Timing of the population dynamics of bullhead Cottus gobio (Teleostei: Cottidae) during the Pleistocene. Journal of Evolutionary Biology, 15, 930-944.
80. Watanabe Y, Chiba S (2001) High within-population mitochondrial DNA variation due to microvicariance and population mixing in the land snail Euhadra quaesita (Pulmonata: Bradybaenidae). Molecular Ecology, 10, 2635-2645.
81. Wiens JJ (2004) What is speciation and how should we study it? American Naturalist, 163, 914-923.
82. Wiktor A (1983) The slugs of Bulgaria (Arionidae, Milacidae, Limacidae, Agriolimacidae - Gastropoda, Stylommatophora). Annales Zoologici, 37, 71-206.
83. Wiktor A (2001) The slugs of Greece (Arionidae, Milacidae, Limacidae, Agriolimacidae - Gastropoda Stylommatophora). Fauna Graeciae, 8.
84. Wilke T, Duncan N (2004) Phylogeographical patterns in the American Pacific Northwest: lessons from the arionid slug Prophysaon coeruleum. Molecular Ecology, 13, 2303-2315.
85. Winnepenninckx B, Backeljau T, De Wachter R (1993) Extraction of high-molecular-weight DNA from mollusks. Trends in Genetics, 9, 407.
86. Xia X, Xie Z (2001) DAMBE: software package for data analysis in molecular biology and evolution. Journal of Heredity, 92, 371-373.
87. Xia XH, Xie Z, Salemi M, Chen L, Wang Y (2003) An index of substitution saturation and its application. Molecular Phylogenetics and Evolution, 26, 1-7.
88. Yeh FC, Yang R-C, Boyle TBJ, Ye Z-H, Mao JX (1997) POPGENE, the user-friendly shareware for population genetic analysis. Molecular Biology and Biotechnology Centre, University of Alberta, Canada.
89. Zhang LB, Comes HP, Kadereit JW (2004) The temporal course of quaternary diversification in the European high mountain endemic Primula sect. Auricula (Primulaceae). International Journal of Plant Sciences, 165, 191-207.